Gcaud7224.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7224.t1
Unique NameGcaud7224.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length512
Homology
BLAST of Gcaud7224.t1 vs. uniprot
Match: A0A2V3IXH0_9FLOR (Putative V-type proton ATPase subunit H n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXH0_9FLOR)

HSP 1 Score: 672 bits (1734), Expect = 1.620e-238
Identity = 347/492 (70.53%), Postives = 416/492 (84.55%), Query Frame = 0
Query:   16 MAWALYLSNTNQAAVSDDQLAELDAYEQATKAGPLHRSRLLASRIGNIVHALVCTAGAVNSRVQMLRAVNLLREVLNGADYVLLRHAIRGYTAALIEHQPTTRYSSTHNQTSSVGPPFLGPLANIAVNRVSDQQLSAIAADSLAFLLGCASLDHGADKSIPSHICDQADEQTRRVIAMLITEIVLTSSPPALSALSKLLRRDAARYMFCKKDGVSTLASILHTKPGRSFTAIGEQVANAQSNADPVEASYHAVFAVWMLTFAKDPNVVHLFLKSVVSSGLVVVLAKLLNHSSGQRLKIARVTLASLRNMATGDTDFHRDIRRDLVSTEIPQTLQRIMHMTSGAGSLIGKDDEAMADALALHQLLLKEKASMSSLQAYVSEVKFGALHWSPIHTDSVFWEKNAAKLVESHREVLGLLSDMISSAKTTDEERIIACHDLVCIIQYSPTGRHAVASIPGLKKCLMKLMTSASSPELRLKALCCVQLIMLSGRVAM 507
            MAWALYLSNTN+ AV+DDQLAELDAYEQA KAGP HR++LL+ RIG+IVHALVCTAGAVNSR QMLRAV LL++VLN A++  LR A+RGYTAA ++ QP     ++ N   SVGPPFL PLANIAVNRVSD+QLS +AADSLA LLGCASLD+GAD+ IP HIC QADEQT+R+ AML+TEIVL+SSP AL AL+KLLRRDAAR +FC+KDGVSTLAS L TKPGRSFTAIGE +A+++++ADPV ASYHAV AVWMLTF K P V+ +FLKS  SS LVVVLA+LL+H+SGQRLKIARVTLASLRNMATG ++ H+++RRDLVS ++PQ LQR+MHMT+GAGSLIGKDD+AM+DA ALH++LLKEKASMSSL AY SEVK GALH SP+H D +FW  +A  +VE HREVL LL+D ++S   T+EE+IIAC D+  IIQ++ TGRHAV+SI  LK CLMKLM+ A + ELR KAL CVQL++LSGR+A+
Sbjct:    1 MAWALYLSNTNETAVTDDQLAELDAYEQACKAGPHHRAKLLSYRIGHIVHALVCTAGAVNSRTQMLRAVTLLKQVLNEANFTTLRTAVRGYTAAFLQQQPPNNSQTSPNHNHSVGPPFLRPLANIAVNRVSDKQLSTLAADSLACLLGCASLDYGADECIPHHICQQADEQTKRLTAMLVTEIVLSSSPLALGALAKLLRRDAARQIFCEKDGVSTLASTLLTKPGRSFTAIGEIIASSENDADPVHASYHAVLAVWMLTFGKKPQVLQMFLKSACSSRLVVVLARLLDHASGQRLKIARVTLASLRNMATGSSELHQEVRRDLVSADVPQILQRLMHMTAGAGSLIGKDDDAMSDAHALHEILLKEKASMSSLDAYTSEVKAGALHRSPMHCDELFWVTHANDIVEKHREVLKLLADTVASDSVTEEEKIIACEDISHIIQHAQTGRHAVSSITELKHCLMKLMSFAKTRELRHKALTCVQLLLLSGRIAL 492          
BLAST of Gcaud7224.t1 vs. uniprot
Match: R7QKJ3_CHOCR (V-ATPase_H_C domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKJ3_CHOCR)

HSP 1 Score: 223 bits (567), Expect = 3.440e-66
Identity = 121/232 (52.16%), Postives = 165/232 (71.12%), Query Frame = 0
Query:  273 MLTFAKDPNVVHLFLKSVVSSGLVVVLAKLLNHSSGQRLKIARVTLASLRNMATGDTDFHRDIRRDLVSTEIPQTLQRIMHMTSGAGSLIGKDDEAMADALALHQLLLKEKASMSSLQAYVSEVKFGALHWSPIHTDSVFWEKNAAKLVESHREVLGLLSD-MISSAKTTDEERIIACHDLVCIIQYSPTGRHAVASIPGLKKCLMKLMTSASSPELRLKALCCVQLIMLSG 503
            MLTFA+ P V+ L L  V+SS L+VVL +LLNHSSGQRLKIARVTL+SLRNMA+G T  H  IRRDL++ E+P  L+R++ M SG G+L+G D++AM DA AL +LL +E+ASMS+L AY++EV+  ALHWSPIH D+ FW  NA ++V+ HR V+  L+  +I S + + E   +AC+DL  +++ + TG+ A+ SI GLK  LM LMT    P +R   L CVQ ++ S 
Sbjct:    1 MLTFAQRPEVMELVLSHVLSSRLLVVLGRLLNHSSGQRLKIARVTLSSLRNMASGSTVMHTRIRRDLLAAEVPAVLRRLIRMGSGRGALLGADEDAMDDARALAELLQEERASMSTLDAYIAEVQADALHWSPIHRDARFWMVNAQRIVDDHRRVVRQLATVLIESQRQSAEAIAVACNDLSMLMRETTTGKAALLSIEGLKVSLMSLMTCHEDPTVRAATLTCVQYLITSS 232          
BLAST of Gcaud7224.t1 vs. uniprot
Match: M2WUD8_GALSU (V-type H+-transporting ATPase subunit h isoform 1 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WUD8_GALSU)

HSP 1 Score: 107 bits (266), Expect = 2.950e-21
Identity = 81/278 (29.14%), Postives = 144/278 (51.80%), Query Frame = 0
Query:  207 LSALSKLLRRDAARYMFCKK--DGVSTLASILHTKPGRSFTAIGEQVANAQSNADPVEASYHAVFAVWMLTFAKDPNVVHLFLKSVVSSGLVVVLAKLLNHSSGQRLKIARVTLASLRNMATGDTDFHRDIRRDLVSTEIPQTLQRIMHMTSGAGSLIGKDDEAMADALALHQLLLKEKASMSSLQAYVSEVKFGALHWSPIHTDSVFWEKNAAKLVESHREVLGLLSDMISSAKTTDEERIIACHDLVCIIQYSPTGRHAVASIPGLKKCLMKLMTS 482
            LS+L + +R D +R  F +K  D V  L+ +L                  ++  +PV   Y  +F +WML+FA    V  +  +S+    +   + ++L + + +  K+ RVTL+  RN+A G     + IRR+L+   +   L++++ ++S   S    D + + D  A+   L +E+  M+S + Y  EV  GAL+W+P+H D VFW +N  KL +++ EV+ +L  ++    ++    I ACHDL   ++Y P+GR  +     +K  LM+LM +
Sbjct:  171 LSSLCQFVRHDNSRLAFAEKGKDNVKNLSYLLE-----------------KNKQEPVSIIYKTLFVLWMLSFAHSAEVKQVVAESLEKIFISRHILEVLKYFTME--KVIRVTLSFTRNLAAGSLG--QRIRRELIGAGV---LEQVVILSSKGWS----DKDIVDDINAIQSCLEEERKVMNSFELYREEVLSGALNWTPVHKDPVFWSENVQKLDKNNFEVVEMLVRLVEETHSSVVASI-ACHDLAMYMKYHPSGRLHIQRY-HVKDRLMELMVT 418          
BLAST of Gcaud7224.t1 vs. uniprot
Match: A0A7S0ZD79_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZD79_9RHOD)

HSP 1 Score: 106 bits (265), Expect = 3.840e-21
Identity = 89/299 (29.77%), Postives = 157/299 (52.51%), Query Frame = 0
Query:  207 LSALSKLLRRDAARYMFCKK--DGVSTLASILHTKPGRSFTAIGEQVANAQSNADPVEASYHAVFAVWMLTFAKDPNVVHLFLKSVVSSGLVVVLAKLLNHSSGQRLKIARVTLASLRNMATGDTDFHRDIRRDLVSTEIPQTLQRIMHMTSGAGSLIGKDDEAMADALALHQLLLKEKASMSSLQAYVSEVKFGALHWSPIHTDSVFWEKNAAKLVESHREVLGLLSDMISSAKTTDEERI-IACHDLVCIIQYSPTGRHAVASIPGLKKCLMKLMTSASSPELRLKALCCVQLIMLS 502
            L AL ++ R D AR +FC      V+ +A +L  +  +                  V+A Y AVF +W+L+FA          +++  + +   L+ LL   + +  K+ RV +A+L N+ T D  F   +RR++V   I +T++++             D + + D  +L + L +EK  MSS + Y  EV  GAL W+ +H+D +FW  N  ++ +++ EVL  L  +++  +++D   + +AC+DL   ++Y P GR+   S+ G+KK LM LM S  + ++R  AL CVQ++M++
Sbjct:  177 LQALGQMFRVDVARKLFCLNYPKNVAIVARLLDAEMHKQ-----------------VQALYQAVFVLWLLSFASAGETADAVSQAMDVAFVPRRLSLLLREVTAE--KVVRVCVATLNNL-TKDK-FSPRLRREMVGAGISKTVEQLCVRRWA-------DIDILNDMASLGESLHEEKKLMSSFEVYHHEVLSGALQWTHVHSDDMFWRDNVERMEKNNMEVLRCLVRLLN--QSSDPVVLSVACNDLGMFVKYHPRGRYIAQSL-GMKKKLMLLM-SHENADVRRHALNCVQVLMIT 443          
BLAST of Gcaud7224.t1 vs. uniprot
Match: VATH1_CAEBR (Probable V-type proton ATPase subunit H 1 n=2 Tax=Caenorhabditis TaxID=6237 RepID=VATH1_CAEBR)

HSP 1 Score: 86.3 bits (212), Expect = 2.130e-14
Identity = 80/300 (26.67%), Postives = 141/300 (47.00%), Query Frame = 0
Query:  206 ALSALSKLLRRDAARYMFCKKDGVSTLASILHTKPGRSFTAIGEQVANAQSNADPVEASYHAVFAVWMLTFAKDPNVVHLFLKSVVSSGLVVVLAKLLNHSSGQRLKIARVTLASLRNMATGDTDFH--RDIRRDLVSTEIPQTLQRIMHMTSGAGSLIGKDDEAMADALALHQLLLKEKASMSSLQAYVSEVKFGALHWSPIHTDSVFWEKNAAKLVESHREVLGLLSDMISSAKTTDEERI-IACHDLVCIIQYSPTGRHAVASIPGLKKCLMKLMTSASSPELRLKALCCVQLIMLS 502
            A+  +  L R D  R  F    G  +L+  L++     F                 +  Y  +F +W+LTF      V L         L+  ++ +L  S  +  K+ R+ LA+LRN+   + D +  +   R +V  +I   L ++ H+ +       +D + + D   L + L K    ++S + Y SE++ GAL WSP H   +FW +NA KL ++ +E+L +L  M+   K+ D   + +A +D+   ++Y P G+  V  + G K+ LM+L+T    P +R  AL   Q +M++
Sbjct:  179 AVRCMQTLFRIDPYRVSFVNISGYESLSHALYSTRKCGF-----------------QIQYQIIFCMWLLTFNGHAAEVAL------CGNLIQTISTILGTSHKE--KVIRIVLATLRNLIASNEDEYMKKQAARQMVQNQI---LVKLDHLENRKF----QDVDLIDDMAFLQKELKKVVEVLTSFEEYESELRHGALFWSPPHKCEIFWTENAHKLNDNRQELLKMLITMLE--KSNDPLVLCVAANDIGEFVRYYPRGKMHVEQLGG-KEALMRLLT-VPDPNVRYFALLAAQKLMVN 442          
BLAST of Gcaud7224.t1 vs. uniprot
Match: A0A1W0WSK0_HYPDU (V-type proton ATPase subunit H n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0WSK0_HYPDU)

HSP 1 Score: 83.2 bits (204), Expect = 3.170e-13
Identity = 79/296 (26.69%), Postives = 137/296 (46.28%), Query Frame = 0
Query:  210 LSKLLRRDAARYMFCKKDGVSTLASILHTKPGRSFTAIGEQVANAQSNADPVEASYHAVFAVWMLTFAKDPNVVHLFLKSVVSSGLVVVLAKLLNHSSGQRLKIARVTLASLRNMATGDTDFHRDIRRDLVSTEIPQTL--QRIMHMTSGAGSLIGKDDEAMADALALHQLLLKEKASMSSLQAYVSEVKFGALHWSPIHTDSVFWEKNAAKLVESHREVLGLLSDMISSAKTTDEERIIACHDLVCIIQYSPTGRHAVASIPGLKKCLMKLMTSASSPELRLKALCCVQLIMLSG 503
            L  ++R    R  F   DG+S++ + L            +QV N Q         Y  +F +W LTF  DP++   F     +   + VLA +L  S  Q+ K+ R+ +A+LRN+     +       D ++ E   T+   RI++      +   +D++ + D   L   L     ++S+   YVSE+K GAL WSP+H +  FW +N     +S+ E++ +L  ++    T      +A HD+   ++Y P G+  V  + G K   M ++T   +  +R +AL  VQ +M+  
Sbjct:  299 LQMIVRVAEYRVAFTNLDGISSILTAL------------KQVNNFQ-------IQYQLIFCLWCLTF--DPDIAAKFQ----NYNAIQVLASVLAES--QKDKVTRIIIATLRNLLENPIE-------DALAQEHALTMIHSRILNTLKFLSTKKFEDNDILEDIQYLTDELESIAVNISTYDQYVSELKSGALEWSPVHKNEPFWRENVTLFNDSNYELVKILVRLLE-VSTDPMVLAVAVHDIGQYMRYYPPGKKVVERLGG-KDRAMSMLTHPDA-NVRYQALLAVQKMMVQN 557          
BLAST of Gcaud7224.t1 vs. uniprot
Match: A0A3N4LEJ6_9PEZI (V-type proton ATPase subunit H n=1 Tax=Terfezia boudieri ATCC MYA-4762 TaxID=1051890 RepID=A0A3N4LEJ6_9PEZI)

HSP 1 Score: 77.0 bits (188), Expect = 2.300e-11
Identity = 73/291 (25.09%), Postives = 127/291 (43.64%), Query Frame = 0
Query:  206 ALSALSKLLRRDAARYMFCK--KDGVSTLASILHTKPGRSFTAIGEQ--VANAQSNADPVEASYHAVFAVWMLTFAKD-PNVVHLFLKSVVSSGLVVVLAKLLNHSSGQRLKIARVTLASLRNMATGDTDFHRDIRRDLVSTEIPQTL-QRIMHMTSGAGSLIGKDDEAMADALALHQLLLKEKASMSSLQAYVSEVKFGALHWSPIHTDSVFWEKNAAKLVESHR-EVLGLLSDMIS----SAKTTDEERIIACHDLVCIIQYSPTGRHAVASIPGLKKCLMKLMTSASS 485
            A+ +   LLR   AR  F    ++G+  L SIL T  G + ++ G      N       ++  YH +  +W LTF +     +H          L+  L ++L  S  +  KIAR+T + L N+A+              S  +P  L    + +     S    D +  +D   L + L   + S ++   Y +EV+ G L WSP HT++ FW+KNA +++E +  E++  L   +     +A+       +A HD+  +++  P  R    S+    KC+  +  S +S
Sbjct:  188 AVQSYVSLLRSSYARITFWNAGEEGLRPLISILETAAGGNGSSYGNMSNTGNLIQGGVSLQLLYHILLVIWELTFEEAISEEIHAIYD------LIPTLTQILRSSLKE--KIARITTSILYNLAS-----------KAPSINLPPLLFVNALPLLRSTQSRFTSDPDLASDLTYLIETLENYQRSQTTFDEYAAEVRSGHLSWSPPHTNTDFWKKNARRIIEENNGELMKCLGRALGCGDGNAQRDKTVLAVAAHDVGVLVREVPEKRKVWESLSVKAKCMQLMANSDAS 459          
BLAST of Gcaud7224.t1 vs. uniprot
Match: A0A1J5WYJ5_9MICR (V-type ATPase V1 subunit H n=1 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WYJ5_9MICR)

HSP 1 Score: 74.7 bits (182), Expect = 9.290e-11
Identity = 68/260 (26.15%), Postives = 117/260 (45.00%), Query Frame = 0
Query:  245 TAIGEQVANAQSNADPVEASYHAVFAVWMLTF-----AKDPNVVHLFLKSVVSSGLVVVLAKLLNHSSGQRLKIARVTLASLRNMATGDTDFHRDIR--RDLVSTEIPQTLQRIMHMTSGAGSLIGKDDEAMADALALHQLLLKEKASMSSLQAYVSEVKFGALHWSPIHTDSVFWEKNAAKLVESHREVLGLLSDMISSAKTTDEERIIACHDLVCIIQYSPTGRHAVASIPGLKKCLMKLMTSASSPELRLKALCCVQ 497
            T I  ++ +    AD V   Y+ V+ +W+ +F     AK+        + +VS  L +           ++ KIAR+ +    N+       H   R  R LV T +   ++ +     G       D+E   +   L + L +   S+++ + Y +E++   L WSP HT ++FWEKN+ +L E  +E+L +LSD+++      E   IA HDL   +++ P G  AV       K +    T     E+R ++L  VQ
Sbjct:  165 TDIVRRIVDGSRKAD-VGTKYYFVYLLWVFSFNPLAAAKEEKA-----REIVSFSLQL-------FREVEKEKIARLCVFIFSNLI-----LHGGARTARLLVGTRVGPFVEVVRGKKYG-------DEELSEEVCFLQKRLSEASISLTTFEEYAAELRTKRLEWSPTHTSTLFWEKNSPRLFEKKKELLRILSDIVTQEGEA-ESVAIATHDLGQFVKFCPVGVEAVKEFAIKDKIIRN--TQHPDREVRYQSLIAVQ 396          
The following BLAST results are available for this feature:
BLAST of Gcaud7224.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3IXH0_9FLOR1.620e-23870.53Putative V-type proton ATPase subunit H n=1 Tax=Gr... [more]
R7QKJ3_CHOCR3.440e-6652.16V-ATPase_H_C domain-containing protein n=1 Tax=Cho... [more]
M2WUD8_GALSU2.950e-2129.14V-type H+-transporting ATPase subunit h isoform 1 ... [more]
A0A7S0ZD79_9RHOD3.840e-2129.77Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
VATH1_CAEBR2.130e-1426.67Probable V-type proton ATPase subunit H 1 n=2 Tax=... [more]
A0A1W0WSK0_HYPDU3.170e-1326.69V-type proton ATPase subunit H n=1 Tax=Hypsibius d... [more]
A0A3N4LEJ6_9PEZI2.300e-1125.09V-type proton ATPase subunit H n=1 Tax=Terfezia bo... [more]
A0A1J5WYJ5_9MICR9.290e-1126.15V-type ATPase V1 subunit H n=1 Tax=Amphiamblys sp.... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038497ATPase, V1 complex, subunit H, C-terminal domain superfamilyGENE3D1.25.40.150coord: 399..503
e-value: 1.4E-20
score: 75.5
IPR004908ATPase, V1 complex, subunit HPFAMPF03224V-ATPase_H_Ncoord: 29..351
e-value: 9.0E-17
score: 61.3
IPR004908ATPase, V1 complex, subunit HPANTHERPTHR10698V-TYPE PROTON ATPASE SUBUNIT Hcoord: 14..501
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 8..387
e-value: 2.5E-24
score: 88.1
IPR011987ATPase, V1 complex, subunit H, C-terminalPFAMPF11698V-ATPase_H_Ccoord: 386..501
e-value: 6.7E-24
score: 84.3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 285..303
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 304..487
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 510..511
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..284
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 488..509
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 206..502

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_726_length_19042_cov_4.198195contigNODE_726_length_19042_cov_4.198195:5029..6564 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7224.t1Gcaud7224.t1Gracilaria caudata M_176_S67 malemRNANODE_726_length_19042_cov_4.198195 5029..6564 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7224.t1 ID=Gcaud7224.t1|Name=Gcaud7224.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=512bp
MPANATVHTITTHSDMAWALYLSNTNQAAVSDDQLAELDAYEQATKAGPL
HRSRLLASRIGNIVHALVCTAGAVNSRVQMLRAVNLLREVLNGADYVLLR
HAIRGYTAALIEHQPTTRYSSTHNQTSSVGPPFLGPLANIAVNRVSDQQL
SAIAADSLAFLLGCASLDHGADKSIPSHICDQADEQTRRVIAMLITEIVL
TSSPPALSALSKLLRRDAARYMFCKKDGVSTLASILHTKPGRSFTAIGEQ
VANAQSNADPVEASYHAVFAVWMLTFAKDPNVVHLFLKSVVSSGLVVVLA
KLLNHSSGQRLKIARVTLASLRNMATGDTDFHRDIRRDLVSTEIPQTLQR
IMHMTSGAGSLIGKDDEAMADALALHQLLLKEKASMSSLQAYVSEVKFGA
LHWSPIHTDSVFWEKNAAKLVESHREVLGLLSDMISSAKTTDEERIIACH
DLVCIIQYSPTGRHAVASIPGLKKCLMKLMTSASSPELRLKALCCVQLIM
LSGRVAMVYNQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038497ATPase_V1-cplx_hsu_C_sf
IPR004908ATPase_V1-cplx_hsu
IPR011989ARM-like
IPR011987ATPase_V1-cplx_hsu_C
IPR016024ARM-type_fold