Gcaud7206.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7206.t1
Unique NameGcaud7206.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length255
Homology
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BLAST of Gcaud7206.t1 vs. uniprot
Match: A0A2V3INI4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INI4_9FLOR)

HSP 1 Score: 163 bits (413), Expect = 1.800e-46
Identity = 91/209 (43.54%), Postives = 118/209 (56.46%), Query Frame = 0 
Query:    6 ALPILLLFCLTLADGDDSDSRRGPMKGIFIPRIPFTTTSTRTESCLLLNGKNVISEPFPFDFEAADTLFACSEKTAGIVTHYPGKLSLFQSEFVCEESPLISYSDEETSVDLSPFRLPFVCLEETCVFYRARGNRVFLSAAIIPEEAPKLAARRDLRIPFLPTEVFYDFDDDMLKKFAEAQAEAFNKGVTGSIDLRAMTYLGVTKSQSP 214
            AL + LL   + A G    S    ++G+  PRIP  T  T+ E C +++ KNVI E FP  FE+   L  C+    G++TH+ G  SL    FVC+E P+ISY                VC +E CVF  A GN+VFLSAAI PEEA  L ++  + IPFLPT+VFY F+   L++FA    +AF K VTGSIDLRAM +LG      P
Sbjct:    6 ALILFLLVTTSAARGRRRRSFPPVLRGVHYPRIPIDTIYTQQERCAIVDAKNVIKEEFPNSFESYSILTTCASNRNGLITHFAGNFSLESFSFVCDEEPVISYDKNAEPPSFPVTGKDVVCGDELCVFVFATGNQVFLSAAISPEEARILPSKPAISIPFLPTKVFYRFNGK-LRQFAGRMVKAFEKDVTGSIDLRAMVFLGARSGSCP 213
The following BLAST results are available for this feature:
BLAST of Gcaud7206.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3INI4_9FLOR1.800e-4643.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_476_length_24381_cov_4.240099contigNODE_476_length_24381_cov_4.240099:7272..8474 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7206.t1Gcaud7206.t1Gracilaria caudata M_176_S67 malemRNANODE_476_length_24381_cov_4.240099 7272..8474 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7206.t1 ID=Gcaud7206.t1|Name=Gcaud7206.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=255bp
MKTLSALPILLLFCLTLADGDDSDSRRGPMKGIFIPRIPFTTTSTRTESC
LLLNGKNVISEPFPFDFEAADTLFACSEKTAGIVTHYPGKLSLFQSEFVC
EESPLISYSDEETSVDLSPFRLPFVCLEETCVFYRARGNRVFLSAAIIPE
EAPKLAARRDLRIPFLPTEVFYDFDDDMLKKFAEAQAEAFNKGVTGSIDL
RAMTYLGVTKSQSPEHDFQVLGVEQPEVEAEEKKTTVKCGKDGCMALIVD
GSGE*
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