Gcaud7140.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud7140.t1 vs. uniprot
Match: A0A2V3IXS7_9FLOR (30S ribosomal protein S2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXS7_9FLOR) HSP 1 Score: 416 bits (1069), Expect = 1.670e-145 Identity = 199/252 (78.97%), Postives = 224/252 (88.89%), Query Frame = 0
Query: 1 MALRNSLRIVRSFSAAASSRRGPMSYSELMASPKFASSANSIFHQYSVQDLMDARVHMGHRTKLWNPKMAPYLLGHRNGMHVIDLDKTADMLRRALIAASHMAENDCTFLWLGPKDVQKSKIVEKQARKAGAFTIGGARWTGGTLTNPIKSNQAQRFNYRIPDCVFIVDTTRHMPALREAKLCGIPTIGIVDSDCDPELLTYPIPGNDDGAHAIYLYCSLMRLAILDGRARGRRLNRPSMAIPALPSTQKAR 252
MA RNS+ +R F + S + S+L++SPKF++SANS FHQYSVQDLM+ARVHMGHRTKLWNPKMAPY+LGHRNGMH+++LD TA MLRRALIAASHMAENDCTFLWLGP+D QKSKIVEKQARKAGA+TI GARW GGTLTNPIKSNQAQRFNYRIPDCVF+VDT RHMPALREA+LCGIPTIGIVDSDCDP+ LTYPIPGNDD A AIYLYCSLM+ A+LDGRARGRRL+RPS+ IP+L S Q+AR
Sbjct: 1 MATRNSISAIRRFCTSIRSHTTQLPDSDLLSSPKFSASANSTFHQYSVQDLMNARVHMGHRTKLWNPKMAPYILGHRNGMHILNLDVTATMLRRALIAASHMAENDCTFLWLGPRDPQKSKIVEKQARKAGAYTIDGARWIGGTLTNPIKSNQAQRFNYRIPDCVFVVDTIRHMPALREARLCGIPTIGIVDSDCDPQFLTYPIPGNDDAALAIYLYCSLMKHALLDGRARGRRLSRPSVQIPSLKSAQRAR 252
BLAST of Gcaud7140.t1 vs. uniprot
Match: A0A7J7IRC1_9RHOD (28S ribosomal protein S2, mitochondrial n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IRC1_9RHOD) HSP 1 Score: 202 bits (515), Expect = 4.630e-62 Identity = 104/202 (51.49%), Postives = 130/202 (64.36%), Query Frame = 0
Query: 47 SVQDLMDARVHMGHRTKLWNPKMAPYLLGHRNGMHVIDLDKTADMLRRALIAASHMAENDCTFLWLGPKDVQKSKIVEKQARKAGAFTIGGARWTGGTLTNPIKSNQAQRFNYRIPDCVFIVDTTRHMPALREAKLCGIPTIGIVDSDCDPELLTYPIPGNDDGAHAIYLYCSLMRLAILDGRARGRRLNRPSMAIPALPST 248
+++ LM A VH GHRT +WNPKM Y+ G RNGMHVIDL +TA LRRAL LWLGPKD IV +AR+AGAFT+ G RW GGTLTNP++S Q +R ++PD +F VD RH AL+EA++ IPTI ++D+DCDP+ TY +PGND+ A AI LYC+L A LDG R R N P I S+
Sbjct: 7 TLRQLMAAGVHFGHRTTVWNPKMRSYVFGKRNGMHVIDLQQTATCLRRALEVFQAAGRAGLRQLWLGPKDPLLENIVRMRARQAGAFTLLG-RWVGGTLTNPVESRQIRRLGGQLPDLLFCVDAHRHRTALKEARIVDIPTIAVIDTDCDPDWATYIVPGNDESARAIDLYCALAVQATLDG-LRERAGNLPKDTIDPAKSS 206
BLAST of Gcaud7140.t1 vs. uniprot
Match: M1UXR0_CYAM1 (Mitochondrial ribosomal protein S2, mitochondrial n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UXR0_CYAM1) HSP 1 Score: 199 bits (506), Expect = 1.870e-60 Identity = 94/184 (51.09%), Postives = 122/184 (66.30%), Query Frame = 0
Query: 45 QYSVQDLMDARVHMGHRTKLWNPKMAPYLLGHRNGMHVIDLDKTADMLRRALIAASHMAENDCTFLWLGPKDVQKSKIVEKQARKAGAFTIGGARWTGGTLTNPIKSNQAQRFNYRIPDCVFIVDTTRHMPALREAKLCGIPTIGIVDSDCDPELLTYPIPGNDDGAHAIYLYCSLMRLAILDG 228
Q +++ L+ A VH+GH+T WNPKM PY+ G RNGMH++DL ++A L+RAL LWLGPKD IV +AR+AGAFT+ G RW GGTLTNP+ S Q R +PD +F VD RH ALREA++ IP+I ++D+DCDP+ TY +PGND+ A AI LYC+L A LDG
Sbjct: 5 QATLRQLLSAGVHIGHKTSAWNPKMRPYIYGERNGMHIVDLQQSAVCLKRALEVFRAAGRAGLRQLWLGPKDPFLESIVRTRARQAGAFTLSG-RWVGGTLTNPVASRQILRLGGHLPDLIFCVDAHRHRTALREARIVDIPSIAVIDTDCDPDWATYIVPGNDESARAIDLYCALAVQATLDG 187
BLAST of Gcaud7140.t1 vs. uniprot
Match: A0A7S1ETF3_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ETF3_9RHOD) HSP 1 Score: 194 bits (494), Expect = 2.870e-58 Identity = 90/204 (44.12%), Postives = 138/204 (67.65%), Query Frame = 0
Query: 49 QDLMDARVHMGHRTKLWNPKMAPYLLGHRNGMHVIDLDKTADMLRRALIAASHMAENDCTFLWLGPKDVQKSKIVEKQARKAG--AFTIGGARWTGGTLTNPIKSNQAQRFNYRIPDCVFIVDTTRHMPALREAKLCGIPTIGIVDSDCDPELLTYPIPGNDDGAHAIYLYCSLMRLAILDGRARGRRLNRPSMAIPALPSTQK 250
+ LM+ARVH+GH+T++W P+MAPY+LG RNGMH+I+LD+T +L +AL A ++ LWLGPK+ + K++ + A+K FT +W GTLTN K+ + + F+Y++PD +F++D + A+REA GIP IGIVD+DC+PE++TYPIPGND+ A++LY SLM A+++G +R IP +P+ ++
Sbjct: 18 RQLMNARVHLGHKTRIWEPRMAPYILGVRNGMHIINLDRTVVLLSQALRFARELSYRSGRILWLGPKEPIQHKVLAEIAQKTPHVLFTKEYKKWVAGTLTNAGKTEKLEEFDYKLPDALFVLDCLHNYTAIREANQVGIPVIGIVDTDCNPEIVTYPIPGNDESTRALHLYSSLMSQAMIEGSKMAHHASRGK--IPKIPTKKE 219
BLAST of Gcaud7140.t1 vs. uniprot
Match: M2VZG4_GALSU (30S ribosomal protein S2 (Plastid) isoform 1 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VZG4_GALSU) HSP 1 Score: 193 bits (491), Expect = 2.100e-57 Identity = 94/198 (47.47%), Postives = 133/198 (67.17%), Query Frame = 0
Query: 44 HQYSVQDLMDARVHMGHRTKLWNPKMAPYLLGHRNGMHVIDLDKTADMLRRALIAASHMAENDCTFLWLGPKDVQKSKIVEKQARKAGAFTIGGARWTGGTLTNPIKSNQAQRFNYRIPDCVFIVDTTRHMPALREAKLCGIPTIGIVDSDCDPELLTYPIPGNDDGAHAIYLYCSLMRLAILDGRA--RGRRLNRPS 239
+ ++++ LM RVHMGH T+ WNPKM Y+LG RNG+H+I+L+ T LRRAL M D LWL PK + + + K A + AF + G RW GTLTNP+ S QA++F Y++PD +F +D H AL+EA++ G+P++GIVD+DCDP +TYPIPGND+ A AI LYC L+ A+ +GR+ +GR +P+
Sbjct: 71 YAFTLEQLMQCRVHMGHVTEKWNPKMGRYILGERNGIHIINLEYTWTHLRRALRVIREMVALDGFVLWLPPKRNELASVARKIAEQGEAFMLDG-RWIPGTLTNPLGSGQAKKFRYKLPDMLFCLDCRFHTVALKEAQMTGVPSVGIVDTDCDPGQVTYPIPGNDESALAISLYCQLVVHAVGEGRSLSKGRMEIKPN 267
BLAST of Gcaud7140.t1 vs. uniprot
Match: A0A5J4Z1M7_PORPP (30S ribosomal protein S2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1M7_PORPP) HSP 1 Score: 165 bits (418), Expect = 2.580e-45 Identity = 77/185 (41.62%), Postives = 117/185 (63.24%), Query Frame = 0
Query: 52 MDARVHMGHRTKLWNPKMAPYLLGHRNGMHVIDLDKTADMLRRALIAASHMAENDCTFLWLGPKD-VQKSKIVEKQARKAGA-FTIGGARWTGGTLTNPIKSNQAQRFNYRIPDCVFIVDTTRHMPALREAKLCGIPTIGIVDSDCDPELLTYPIPGNDDGAHAIYLYCSLMRLAILDGRARGRR 234
MDARVH+GH+T++WNP+MAP++LG RNGMH+I+LDKT ++ AL A + + WLGP++ Q +V R GA F RW GG TN + QRF ++PD +F++D ++ A+ EA + + I ++D+DCDP+ + YPIPGND+ + A++LY S+M A+ +G R+
Sbjct: 14 MDARVHLGHKTRVWNPRMAPFILGVRNGMHIINLDKTVVLMADALRFARELTASGGRIYWLGPREETQHDMLVSIAERTPGAIFQRKSKRWIGGMFTNAAQMGTLQRFGNKLPDALFVMDARKNRVAIAEANVMSMQVIAVLDTDCDPKEVQYPIPGNDESSLALHLYMSMMSHAMTEGHLLYRK 198
BLAST of Gcaud7140.t1 vs. uniprot
Match: RS2_RHIL3 (30S ribosomal protein S2 n=217 Tax=Proteobacteria TaxID=1224 RepID=RS2_RHIL3) HSP 1 Score: 158 bits (400), Expect = 4.140e-44 Identity = 92/250 (36.80%), Postives = 132/250 (52.80%), Query Frame = 0
Query: 46 YSVQDLMDARVHMGHRTKLWNPKMAPYLLGHRNGMHVIDLDKTADMLRRALIAASHMAENDCTFLWLGPKDVQKSKIVEKQARKAGAFTIGGARWTGGTLTN---------------PIKSNQAQRFNYR------------------------IPDCVFIVDTTRHMPALREAKLCGIPTIGIVDSDCDPELLTYPIPGNDDGAHAIYLYCSLMRLAILDGRAR-----GRRLNRPSMAIPALPSTQKA 251
+S++ L++A VH GH+T WNPKM PY+ G RN +H+IDL +T ML RAL S L++G K Q S+I+ A+++ + + +RW GG +TN I + +AQ F + PD +FI+DT + A+ EAK GIP + I+DS+CDP+L+ YPIPGNDD + AI LYC L+ A +DG AR GR L S +P P+ ++A
Sbjct: 6 FSMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGGRVLFVGTKR-QASEIIADSAKRSAQYYVN-SRWLGGMMTNWKTISNSIQRLRKLDEILNGEAQGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKIAIDEAKRLGIPVVAIIDSNCDPDLIDYPIPGNDDASRAIALYCELISRAAIDGIARQQGSSGRDLG-ASSEVPVEPALEEA 252
BLAST of Gcaud7140.t1 vs. uniprot
Match: UPI001AE550F6 (30S ribosomal protein S2 n=2 Tax=Aurantimonadaceae TaxID=255475 RepID=UPI001AE550F6) HSP 1 Score: 158 bits (400), Expect = 5.910e-44 Identity = 88/225 (39.11%), Postives = 121/225 (53.78%), Query Frame = 0
Query: 46 YSVQDLMDARVHMGHRTKLWNPKMAPYLLGHRNGMHVIDLDKTADMLRRALIAASHMAENDCTFLWLGPKDVQKSKIVEKQARKAGAFTIGGARWTGGTLTN---------------PIKSNQAQRFNYR------------------------IPDCVFIVDTTRHMPALREAKLCGIPTIGIVDSDCDPELLTYPIPGNDDGAHAIYLYCSLMRLAILDGRAR 231
YS++ L++A VH GH+T WNPKMAPY+ G RN +H++DL +T ML RAL A S L++G K Q S+IV A ++ + + ARW GG LTN + + AQ F + +PD +FI+DT + A+ EAK GIP + +VDS+C+P+ + YPIPGNDD A AI LYC L+ A +DG AR
Sbjct: 6 YSMRQLLEAGVHFGHQTHRWNPKMAPYIFGARNNIHILDLAQTVPMLHRALQAVSDSVARGGRVLFVGTKR-QASEIVADAANRSAQYYVN-ARWLGGMLTNWKTISNSIQRLRKLDELLAGDAQGFTKKERLTLQRERDKLDRALGGIKDMGGVPDMIFIIDTNKESIAIEEAKRLGIPVVAVVDSNCNPDPIDYPIPGNDDAARAISLYCDLIARAAVDGIAR 228
BLAST of Gcaud7140.t1 vs. uniprot
Match: A0A0D5LSB9_9HYPH (30S ribosomal protein S2 n=13 Tax=Hyphomicrobiales TaxID=356 RepID=A0A0D5LSB9_9HYPH) HSP 1 Score: 158 bits (399), Expect = 8.570e-44 Identity = 86/225 (38.22%), Postives = 123/225 (54.67%), Query Frame = 0
Query: 46 YSVQDLMDARVHMGHRTKLWNPKMAPYLLGHRNGMHVIDLDKTADMLRRALIAASHMAENDCTFLWLGPKDVQKSKIVEKQARKAGAFTIGGARWTGGTLTN---------------PIKSNQAQRFNYR------------------------IPDCVFIVDTTRHMPALREAKLCGIPTIGIVDSDCDPELLTYPIPGNDDGAHAIYLYCSLMRLAILDGRAR 231
++++ L++A VH GH+T WNPKM PY+ G RN +H+IDL +T ML RAL S + L +G K Q S+IV + A+++ + + +RW GG LTN I +N+AQ F + +PD +FI+DT + A+ EAK GIP + +VDS+CDP+ + YPIPGNDD + AI LYC L+ A +DG AR
Sbjct: 6 FTMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARNGRVLMVGTKR-QASEIVAESAQRSAQYYVN-SRWLGGMLTNWRTISNSIQRLRKLDEILANEAQGFTKKERLNLDREREKLDRALGGIRDMGGVPDLIFIIDTNKEKIAIEEAKRLGIPVVAVVDSNCDPDEVDYPIPGNDDASRAISLYCDLISRAAIDGIAR 228
BLAST of Gcaud7140.t1 vs. uniprot
Match: A0A562CNY3_9HYPH (30S ribosomal protein S2 n=1 Tax=Mesorhizobium sp. J18 TaxID=935263 RepID=A0A562CNY3_9HYPH) HSP 1 Score: 157 bits (398), Expect = 1.540e-43 Identity = 87/225 (38.67%), Postives = 123/225 (54.67%), Query Frame = 0
Query: 46 YSVQDLMDARVHMGHRTKLWNPKMAPYLLGHRNGMHVIDLDKTADMLRRALIAASHMAENDCTFLWLGPKDVQKSKIVEKQARKAGAFTIGGARWTGGTLTN---------------PIKSNQAQRFNYR------------------------IPDCVFIVDTTRHMPALREAKLCGIPTIGIVDSDCDPELLTYPIPGNDDGAHAIYLYCSLMRLAILDGRAR 231
+S++ L++A VH GH+T WNPKMAPY+ G RN +HVIDL +T +L +AL A S L++G K Q S+IV A+++ + + ARW GG LTN + + +AQ F + PD +F++DT + A++EAK GIP + I+DS+CDP+ + YPIPGNDD A AI LYC L+ A +DG AR
Sbjct: 6 FSMRQLLEAGVHFGHQTHRWNPKMAPYIFGARNNIHVIDLSQTVPLLEQALRAVSDTVSKGGRLLFVGTKR-QASEIVADAAQRSAQYYVN-ARWLGGMLTNWKTISNSIQRLRKLDELLAGEAQGFTKKERLNLERERAKLDRALGGIKDMGSTPDMMFVIDTNKEAIAVQEAKRLGIPVVAIIDSNCDPDPIDYPIPGNDDAARAISLYCDLIARAAIDGIAR 228 The following BLAST results are available for this feature:
BLAST of Gcaud7140.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud7140.t1 ID=Gcaud7140.t1|Name=Gcaud7140.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=257bpback to top |