Gcaud6858.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud6858.t1
Unique Name	Gcaud6858.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	247

Homology

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BLAST of Gcaud6858.t1 vs. uniprot
Match: A0A2V3IWV1_9FLOR (37S ribosomal protein S9, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWV1_9FLOR)

HSP 1 Score: 316 bits (810), Expect = 8.490e-106
Identity = 165/251 (65.74%), Postives = 194/251 (77.29%), Query Frame = 0

Query:    1 MFRLARRAANQGYGIALQI-YSQGSESKILWSPRALIHVSHTIHEDSGKKDTSASSTQSATTSFTAEGD----AQVLGFPDPSDPTQNPLAELAAEDVKTAERYWKQVQSSQQKPEYHQKLNEYGEAHAIGRRKRSRAKIWLTDGEGRISINDRSWVEYFPRIDHRDKILKPLDLLGMIGKMDIRCDVRGGGVNGQAEAIRHGIARALQNWDPSMRPTLKTNGLLTRDSRVVEPKKYGRKKARKSFQWVKR 246
            M  +AR AA +   +     Y +   + +  +  A +H S  +  +SG     A+S   +  +  +  D    A VL FPDP+DP QNPLAELAAE+V+TAE YWK+VQS+QQK +Y Q+LNEYGEAHAIGRRKRSRA+IWLTDGEG I IN++SWV+YFPRIDHRDK+LKPLDLLGMIGKMDIRCDV+GGG NGQAEAIRHGIARALQ WDP+MR TLK+NGLLTRDSRVVE KKYGRKKARKSFQWVKR
Sbjct:   37 MLPIARGAAIRAQRVLHYFHYRRSIGAALALTQTASVHASSIVQSESGVTSPGATSADPSKQASASGSDLKPVANVLHFPDPTDPKQNPLAELAAEEVRTAEAYWKKVQSTQQKHQYRQELNEYGEAHAIGRRKRSRARIWLTDGEGHIVINNQSWVDYFPRIDHRDKVLKPLDLLGMIGKMDIRCDVKGGGTNGQAEAIRHGIARALQKWDPNMRSTLKSNGLLTRDSRVVESKKYGRKKARKSFQWVKR 287

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BLAST of Gcaud6858.t1 vs. uniprot
Match: R7Q7R1_CHOCR (Ribosomal protein S9 family protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7R1_CHOCR)

HSP 1 Score: 211 bits (536), Expect = 4.530e-66
Identity = 102/156 (65.38%), Postives = 121/156 (77.56%), Query Frame = 0

Query:   91 EDVKTAERYWKQVQSSQQKPEYHQKLNEYGEAHAIGRRKRSRAKIWLTDGEGRISINDRSWVEYFPRIDHRDKILKPLDLLGMIGKMDIRCDVRGGGVNGQAEAIRHGIARALQNWDPSMRPTLKTNGLLTRDSRVVEPKKYGRKKARKSFQWVKR 246
            EDV+    Y K+V S+ + P Y +K+NE GEA+AIG RKRS+AK+WL  G G I +N RSWV+YF R+D RDKILKP  LL + G MD+ C+V+GGG  GQAEA RH +ARALQNW+P  RPT+K NG LTRDSR VEPKKYGRKKARKSFQWVKR
Sbjct:    3 EDVEERREYLKKVNSTNKPPVYKRKVNENGEAYAIGSRKRSKAKVWLRPGTGDIVVNGRSWVDYFRRLDQRDKILKPFGLLRLTGSMDVTCEVKGGGTTGQAEAFRHALARALQNWNPEYRPTMKENGFLTRDSREVEPKKYGRKKARKSFQWVKR 158

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BLAST of Gcaud6858.t1 vs. uniprot
Match: A0A5P1ERK1_ASPOF (Uncharacterized protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1ERK1_ASPOF)

HSP 1 Score: 156 bits (395), Expect = 4.500e-42
Identity = 72/132 (54.55%), Postives = 100/132 (75.76%), Query Frame = 0

Query:  115 KLNEYGEAHAIGRRKRSRAKIWLTDGEGRISINDRSWVEYFPRIDHRDKILKPLDLLGMIGKMDIRCDVRGGGVNGQAEAIRHGIARALQNWDPSMRPTLKTNGLLTRDSRVVEPKKYGRKKARKSFQWVKR 246
            +++E G A+  GRRK S A++W+  G+G+  +ND+ +  YFP +DHR ++L+P  +   +G  D++C V+GGGV+GQ  AIR GI+RALQNW+P +RP LK+ G LTRD+RVVE KKYG+ KARKSFQWVKR
Sbjct:  259 RVDEKGRAYGTGRRKCSIARVWINPGDGKFIVNDKQFDVYFPILDHRAELLRPFTVTNSLGLWDVKCTVKGGGVSGQVGAIRLGISRALQNWEPGLRPYLKSAGYLTRDARVVERKKYGKAKARKSFQWVKR 390

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BLAST of Gcaud6858.t1 vs. uniprot
Match: W1NIC0_AMBTC (Uncharacterized protein n=2 Tax=Magnoliopsida TaxID=3398 RepID=W1NIC0_AMBTC)

HSP 1 Score: 157 bits (398), Expect = 6.680e-42
Identity = 84/168 (50.00%), Postives = 114/168 (67.86%), Query Frame = 0

Query:   84 PLAELAAEDVKTAERYWKQVQSSQQKPE-----YHQKLNEYGEAHAIGRRKRSRAKIWLTDGEGRISINDRSWVEYFPRIDHRDKILKPLDLLGMIGKMDIRCDVRGGGVNGQAEAIRHGIARALQNWDPSMRPTLKTNGLLTRDSRVVEPKKYGRKKARKSFQWVKR 246
            PL+EL    +  +ER   + +  QQK E     Y +K++E G A+  GRRK S A++W+  G+G+  +ND+ +  YFP +DHR  +LKP      +G  D++C V+GGGV+GQA AIR GI+RALQNW+P +R  L++ GLLTRD RVVE KK G+ KARKSFQWVKR
Sbjct:  296 PLSELEDARLANSERKSPRFEMEQQKQEEIAKTYVRKVDEKGRAYGTGRRKCSIARVWVQPGDGKFIVNDKQFDVYFPILDHRIDLLKPFVETKTLGLWDVKCTVKGGGVSGQAGAIRLGISRALQNWEPGLRSYLRSTGLLTRDPRVVERKKPGKAKARKSFQWVKR 463

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BLAST of Gcaud6858.t1 vs. uniprot
Match: A0A2I0B7J8_9ASPA (Uncharacterized protein n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0B7J8_9ASPA)

HSP 1 Score: 156 bits (395), Expect = 8.760e-42
Identity = 81/176 (46.02%), Postives = 115/176 (65.34%), Query Frame = 0

Query:   71 VLGFPDPSDPTQNPLAELAAEDVKTAERYWKQVQSSQQKPEYHQKLNEYGEAHAIGRRKRSRAKIWLTDGEGRISINDRSWVEYFPRIDHRDKILKPLDLLGMIGKMDIRCDVRGGGVNGQAEAIRHGIARALQNWDPSMRPTLKTNGLLTRDSRVVEPKKYGRKKARKSFQWVKR 246
            + G P  S+     +A+L A   +      KQ + ++ +    +K++E G A+  GRRK S A++W+  GEGR  +ND+ +  YFP +DHR  +L+P  +   +G  D+ C V+GGGV+GQ  A+R GI+RALQ+W+P +RP LK+ G LTRDSRVVE KK G+ KARKSFQWVKR
Sbjct:  251 IKGLPPLSEIEDAAIAKLNATSTRAEVERKKQEEIAKSRV---RKVDEKGRAYGTGRRKCSVARVWIQPGEGRFMVNDKEFDAYFPILDHRADLLQPFTITNTLGLWDVTCTVKGGGVSGQVGAVRLGISRALQHWEPGLRPYLKSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 423

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BLAST of Gcaud6858.t1 vs. uniprot
Match: A0A4Y7KRW4_PAPSO (Uncharacterized protein n=1 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7KRW4_PAPSO)

HSP 1 Score: 148 bits (373), Expect = 2.140e-41
Identity = 74/131 (56.49%), Postives = 97/131 (74.05%), Query Frame = 0

Query:  116 LNEYGEAHAIGRRKRSRAKIWLTDGEGRISINDRSWVEYFPRIDHRDKILKPLDLLGMIGKMDIRCDVRGGGVNGQAEAIRHGIARALQNWDPSMRPTLKTNGLLTRDSRVVEPKKYGRKKARKSFQWVKR 246
            +++ G A+  GRR  + A++W+  G+GR SIND+S+  YFP +DHR  IL+P      +G  D++C V+GGG++GQ  AI+ GI+RALQNW+PS+RP LKT G LTRDSRVVE KK G  KARKSFQWVKR
Sbjct:   32 VDDKGRAYGTGRR--NIARVWVQPGDGRFSINDKSFDVYFPILDHRAAILRPFSETKTLGIWDVKCTVQGGGLSGQVGAIQLGISRALQNWEPSLRPYLKTEGFLTRDSRVVERKKPGMAKARKSFQWVKR 160

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BLAST of Gcaud6858.t1 vs. uniprot
Match: A0A453AUI8_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453AUI8_AEGTS)

HSP 1 Score: 149 bits (375), Expect = 4.080e-41
Identity = 70/131 (53.44%), Postives = 95/131 (72.52%), Query Frame = 0

Query:  116 LNEYGEAHAIGRRKRSRAKIWLTDGEGRISINDRSWVEYFPRIDHRDKILKPLDLLGMIGKMDIRCDVRGGGVNGQAEAIRHGIARALQNWDPSMRPTLKTNGLLTRDSRVVEPKKYGRKKARKSFQWVKR 246
            ++E G A+  G+RK S A++W+  G+G+  +ND+ +  YFP +DHR  +L+P  +   +G  D+ C V+GGGV+GQ  A+R GI+RALQNW+P +RP LK  G LTRDSRVVE KK G+ KARKSFQWVKR
Sbjct:   75 VDEKGRAYGTGKRKCSIARVWIQPGDGKFVVNDKQFDAYFPILDHRADLLRPFTVTKTLGLWDVACTVKGGGVSGQVGAVRLGISRALQNWEPGLRPYLKAAGYLTRDSRVVERKKPGKAKARKSFQWVKR 205

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BLAST of Gcaud6858.t1 vs. uniprot
Match: A0A3R7JDC3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JDC3_9STRA)

HSP 1 Score: 149 bits (377), Expect = 4.540e-41
Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = 0

Query:  115 KLNEYGEAHAIGRRKRSRAKIWLTDGE----GRISINDRSWVEYFPRIDHRDKILKPLDLLGMIGKMDIRCDVRGGGVNGQAEAIRHGIARALQNWDPSMRPTLKTNGLLTRDSRVVEPKKYGRKKARKSFQWVKR 246
            KL+E G A+  GRRK S A++W+        GRI +N +  V+YF R  HR+++LKP  ++  IG  D+ C V+GGG+ GQA A+RHGIARALQN+DP  RP LK  GL+TRD R+VE KK G+KKARK FQWVKR
Sbjct:   98 KLDEKGRAYGTGRRKTSTARVWVKQSAEPFGGRIVVNKKDVVDYFVRDTHREEVLKPFSVIEKIGGFDVYCTVKGGGMTGQAGAVRHGIARALQNYDPEYRPALKKAGLMTRDPRMVERKKPGQKKARKKFQWVKR 233

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BLAST of Gcaud6858.t1 vs. uniprot
Match: S8CMG1_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CMG1_9LAMI)

HSP 1 Score: 149 bits (375), Expect = 8.800e-41
Identity = 71/131 (54.20%), Postives = 93/131 (70.99%), Query Frame = 0

Query:  116 LNEYGEAHAIGRRKRSRAKIWLTDGEGRISINDRSWVEYFPRIDHRDKILKPLDLLGMIGKMDIRCDVRGGGVNGQAEAIRHGIARALQNWDPSMRPTLKTNGLLTRDSRVVEPKKYGRKKARKSFQWVKR 246
            +++ G A+  G+RK S A++W+  G G+ ++N+R +  YFP IDHR  +L+P      +G  D+RC V+GGG +GQ  AIR GI+RALQNW+P  RP LK  G LTRDSRVVE KK G+ KARKSFQWVKR
Sbjct:  102 IDDKGRAYGTGKRKCSIARVWIQPGGGKFTVNEREFDVYFPTIDHRAALLRPFSETKTLGMWDVRCTVKGGGTSGQVGAIRLGISRALQNWEPEFRPPLKAAGFLTRDSRVVERKKPGKAKARKSFQWVKR 232

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BLAST of Gcaud6858.t1 vs. uniprot
Match: UPI0012636BD1 (30S ribosomal protein S9, mitochondrial-like n=2 Tax=Pistacia vera TaxID=55513 RepID=UPI0012636BD1)

HSP 1 Score: 148 bits (374), Expect = 1.240e-40
Identity = 70/131 (53.44%), Postives = 94/131 (71.76%), Query Frame = 0

Query:  116 LNEYGEAHAIGRRKRSRAKIWLTDGEGRISINDRSWVEYFPRIDHRDKILKPLDLLGMIGKMDIRCDVRGGGVNGQAEAIRHGIARALQNWDPSMRPTLKTNGLLTRDSRVVEPKKYGRKKARKSFQWVKR 246
            +++ G A+  GRRK S A++W+  GEG+  +ND+ +  YFP +DHR  +L+P      +G  D+ C V+GGGV+GQ  AIR GI+RALQNW+P +RP L++ G LTRD RVVE KK G+ KARKSFQWVKR
Sbjct:  102 VDDQGRAYGTGRRKCSIARVWIQPGEGKFVVNDKEFDVYFPMLDHRATLLRPFSETKTLGLWDVNCTVKGGGVSGQVGAIRLGISRALQNWEPDLRPALRSVGFLTRDPRVVERKKPGKAKARKSFQWVKR 232

The following BLAST results are available for this feature:

BLAST of Gcaud6858.t1 vs. uniprot

BLAST of Gcaud6858.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3IWV1_9FLOR	8.490e-106	65.74	37S ribosomal protein S9, mitochondrial n=1 Tax=Gr...	[more]
R7Q7R1_CHOCR	4.530e-66	65.38	Ribosomal protein S9 family protein n=1 Tax=Chondr...	[more]
A0A5P1ERK1_ASPOF	4.500e-42	54.55	Uncharacterized protein n=1 Tax=Asparagus officina...	[more]
W1NIC0_AMBTC	6.680e-42	50.00	Uncharacterized protein n=2 Tax=Magnoliopsida TaxI...	[more]
A0A2I0B7J8_9ASPA	8.760e-42	46.02	Uncharacterized protein n=1 Tax=Apostasia shenzhen...	[more]
A0A4Y7KRW4_PAPSO	2.140e-41	56.49	Uncharacterized protein n=1 Tax=Papaver somniferum...	[more]
A0A453AUI8_AEGTS	4.080e-41	53.44	Uncharacterized protein n=1 Tax=Aegilops tauschii ...	[more]
A0A3R7JDC3_9STRA	4.540e-41	55.15	Uncharacterized protein n=3 Tax=Phytophthora kerno...	[more]
S8CMG1_9LAMI	8.800e-41	54.20	Uncharacterized protein (Fragment) n=1 Tax=Genlise...	[more]
UPI0012636BD1	1.240e-40	53.44	30S ribosomal protein S9, mitochondrial-like n=2 T...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000754	Ribosomal protein S9	PFAM	PF00380	Ribosomal_S9	coord: 126..246 e-value: 1.6E-47 score: 161.1
IPR000754	Ribosomal protein S9	PANTHER	PTHR21569	RIBOSOMAL PROTEIN S9	coord: 51..246
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 116..246 e-value: 6.1E-51 score: 174.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..67
None	No IPR available	PANTHER	PTHR21569:SF1	28S RIBOSOMAL PROTEIN S9, MITOCHONDRIAL	coord: 51..246
IPR020574	Ribosomal protein S9, conserved site	PROSITE	PS00360	RIBOSOMAL_S9	coord: 185..203
IPR023035	Ribosomal protein S9, bacterial/plastid	HAMAP	MF_00532_B	Ribosomal_S9_B	coord: 117..246 score: 28.893503
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 123..246

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_37_length_70757_cov_4.492641	contig	NODE_37_length_70757_cov_4.492641:5478..6218 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud6858.t1	Gcaud6858.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_37_length_70757_cov_4.492641 5478..6218 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud6858.t1 ID=Gcaud6858.t1|Name=Gcaud6858.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=247bp
MFRLARRAANQGYGIALQIYSQGSESKILWSPRALIHVSHTIHEDSGKKD
TSASSTQSATTSFTAEGDAQVLGFPDPSDPTQNPLAELAAEDVKTAERYW
KQVQSSQQKPEYHQKLNEYGEAHAIGRRKRSRAKIWLTDGEGRISINDRS
WVEYFPRIDHRDKILKPLDLLGMIGKMDIRCDVRGGGVNGQAEAIRHGIA
RALQNWDPSMRPTLKTNGLLTRDSRVVEPKKYGRKKARKSFQWVKR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000754	Ribosomal_S9
IPR014721	Ribosomal_S5_D2-typ_fold_subgr
IPR020574	Ribosomal_S9_CS
IPR023035	Ribosomal_S9_bac/plastid
IPR020568	Ribosomal_S5_D2-typ_fold