Gcaud6736.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud6736.t1
Unique NameGcaud6736.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length300
Homology
BLAST of Gcaud6736.t1 vs. uniprot
Match: A0A2V3IX06_9FLOR (Surfeit locus protein 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX06_9FLOR)

HSP 1 Score: 166 bits (419), Expect = 3.590e-45
Identity = 107/189 (56.61%), Postives = 136/189 (71.96%), Query Frame = 0
Query:    1 MADKSDAVRYAEQHAGTTKLLPSGKLQFTHSGMEFPPHVDWNTLQSYATGRAYRRGVARKKNDAYDFEQHVPYIVPHKQRDEKHFLYCTLTNKTLPRQRDVLLNHTNGKRYKRRLEEAQQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMQTER-----AQGAQDVLDGLLSSDEEST-SGDDQME 183
            M   S+A  YA++H  +T LLP+GK++F  +GMEFP +V  + L++Y  G+A+RR VA+K NDAY+F+QHVPYI+PH  +D+KHFLYCTLT  TLPR RDVL+NHTNGKR+KRR +EA++K          XXXXXXXXXXXXXXXXXXXX    +           DVLDG+LSSD+ES  S DD+ E
Sbjct:   86 MLPTSEAAMYAKEHPDSTTLLPNGKIRFIQTGMEFPANVQTSALKAYVDGKAFRRAVAKKINDAYEFDQHVPYIIPHPHKDKKHFLYCTLTGCTLPRSRDVLVNHTNGKRFKRRFQEAEKKRLEREQRELKXXXXXXXXXXXXXXXXXXXXXXXKDDEPMDDGTKENDVLDGILSSDDESADSSDDEGE 274          
BLAST of Gcaud6736.t1 vs. uniprot
Match: R7Q9F3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9F3_CHOCR)

HSP 1 Score: 143 bits (360), Expect = 4.690e-36
Identity = 63/121 (52.07%), Postives = 86/121 (71.07%), Query Frame = 0
Query:    1 MADKSDAVRYAEQHAGTTKLLPSGKLQFTHSGMEFPPHVDWNTLQSYATGRAYRRGVARKKNDAYDFEQHVPYIVPHKQRDEKHFLYCTLTNKTLPRQRDVLLNHTNGKRYKRRLEEAQQK 121
            M  +SD  RYA +H  +T LLPSGKLQFT SGMEF        L++YA G AY+R +  K N+ YDF QH PY+VPHK +D+ HFL+C LT+  LPR++DV++ H NGKR++R+ +EA ++
Sbjct:   91 MPSQSDVARYAAKHPSSTTLLPSGKLQFTKSGMEFAAMTSGKVLEAYANGLAYKRALQLKANEGYDFAQHEPYVVPHKHKDKNHFLFCKLTSSVLPRRKDVVIGHVNGKRFQRKFKEADRQ 211          
BLAST of Gcaud6736.t1 vs. uniprot
Match: A0A7S3SSV7_EMIHU (Hypothetical protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SSV7_EMIHU)

HSP 1 Score: 81.3 bits (199), Expect = 2.190e-15
Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 0
Query:   19 KLLPSGKLQFTHSGMEFPPHVDWNTLQSYATGRAYRRGVARKKNDAYDFEQHVPYIVPHKQRDEKHFLYCTLTNKTLPRQRDVLLNHTNGKRYKRRLEEAQ 119
            ++L SGK++ + +G E  P +D   L+++  G+ YR+  A     AYDFEQH P++VPHKQ   KH LYCT+T + + RQ   +  H NGKR+KR L E +
Sbjct:   22 EVLDSGKVRCSTTGHECLPQLD--VLRAHWEGKTYRKKAALV---AYDFEQHAPHLVPHKQ--SKHLLYCTVTRQPVSRQPSAVEGHVNGKRFKRMLAERE 115          
BLAST of Gcaud6736.t1 vs. uniprot
Match: A0A7S4C1H0_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C1H0_CHRCT)

HSP 1 Score: 81.6 bits (200), Expect = 1.010e-14
Identity = 47/121 (38.84%), Postives = 72/121 (59.50%), Query Frame = 0
Query:    1 MADKSDAVRYAEQHAGTTKLLPSGKLQFTHSGMEFPPHVDWNTLQSYATGRAYRRGVARKKNDAYDFEQHVPYIVPHKQRDEKHFLYCTLTNKTLPRQRDVLLNHTNGKRYKRRLEEAQQK 121
            M++  D   +   H    ++LPSGK++ T +G E     D + LQ+Y TG+ Y++ VA K   AYDF+QH+P+IVPH +    H LYCTLT + + RQ   +  H +  ++KR LE  +Q+
Sbjct:    1 MSEIIDVSSFVAAH-DDAEVLPSGKIRCTSTGHEVV--ADLSLLQAYWTGKRYKKQVALK---AYDFDQHLPWIVPHTKNP--HLLYCTLTRRPISRQPKTVEGHVSSLKFKRLLEAEKQR 113          
BLAST of Gcaud6736.t1 vs. uniprot
Match: R1D9S4_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D9S4_EMIHU)

HSP 1 Score: 81.3 bits (199), Expect = 1.090e-14
Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 0
Query:   19 KLLPSGKLQFTHSGMEFPPHVDWNTLQSYATGRAYRRGVARKKNDAYDFEQHVPYIVPHKQRDEKHFLYCTLTNKTLPRQRDVLLNHTNGKRYKRRLEEAQ 119
            ++L SGK++ + +G E  P +D   L+++  G+ YR+  A     AYDFEQH P++VPHKQ   KH LYCT+T + + RQ   +  H NGKR+KR L E +
Sbjct:   22 EVLDSGKVRCSTTGHECLPQLD--VLRAHWEGKTYRKKAALV---AYDFEQHAPHLVPHKQ--SKHLLYCTVTRQPVSRQPSAVEGHVNGKRFKRMLAERE 115          
BLAST of Gcaud6736.t1 vs. uniprot
Match: Q22TK7_TETTS (Surfeit locus protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q22TK7_TETTS)

HSP 1 Score: 64.3 bits (155), Expect = 4.440e-8
Identity = 35/103 (33.98%), Postives = 58/103 (56.31%), Query Frame = 0
Query:   19 KLLPSGKLQFTHSGMEFPPHVDWNTLQSYATGRAYRRGVARKKNDAYDFEQHVPYIVPHKQRDEKHFLYCTLTNKTLPRQRDVLLNHTNGKRYKRRLEEAQQK 121
            ++L +GK++   +  E  P V       Y   + Y++ + +     +DF+Q+ P+IVP K  +E HFL+C LT   +PR ++V+L H  GK+Y+R L    QK
Sbjct:   16 EILENGKIRCKLTNHEMNPDVS--KYNEYIKSKGYQKAIEKD----FDFDQYKPHIVPFKGAEE-HFLWCHLTQTKVPRMKNVILRHVEGKKYQRLLSLFNQK 111          
The following BLAST results are available for this feature:
BLAST of Gcaud6736.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IX06_9FLOR3.590e-4556.61Surfeit locus protein 2 n=1 Tax=Gracilariopsis cho... [more]
R7Q9F3_CHOCR4.690e-3652.07Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3SSV7_EMIHU2.190e-1543.56Hypothetical protein (Fragment) n=2 Tax=Emiliania ... [more]
A0A7S4C1H0_CHRCT1.010e-1438.84Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
R1D9S4_EMIHU1.090e-1443.56Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
Q22TK7_TETTS4.440e-833.98Surfeit locus protein n=1 Tax=Tetrahymena thermoph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 108..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..262
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..286
NoneNo IPR availablePANTHERPTHR34348SURFEIT LOCUS PROTEIN 2coord: 19..269
IPR008833Surfeit locus protein 2PFAMPF05477SURF2coord: 17..231
e-value: 6.1E-26
score: 91.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_622_length_20744_cov_5.309592contigNODE_622_length_20744_cov_5.309592:3716..4615 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud6736.t1Gcaud6736.t1Gracilaria caudata M_176_S67 malemRNANODE_622_length_20744_cov_5.309592 3716..4615 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud6736.t1 ID=Gcaud6736.t1|Name=Gcaud6736.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=300bp
MADKSDAVRYAEQHAGTTKLLPSGKLQFTHSGMEFPPHVDWNTLQSYATG
RAYRRGVARKKNDAYDFEQHVPYIVPHKQRDEKHFLYCTLTNKTLPRQRD
VLLNHTNGKRYKRRLEEAQQKQKQKQERMEKRNKKRQRKQEEDADADADA
DAMQTERAQGAQDVLDGLLSSDEESTSGDDQMEDEADADAEAEAEAEAEA
HERDEGSEGNAANSNDVDEVMQDHNDGEKTRVKASPNGVQRTLSGTLPAA
SERTTPQSVKARQFASIKRRRPRTPGPKRVRQARQKRKTEHAPAMENGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008833Surf2