Gcaud3806.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3806.t1
Unique NameGcaud3806.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length137
Homology
BLAST of Gcaud3806.t1 vs. uniprot
Match: A0A2V3IPZ9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPZ9_9FLOR)

HSP 1 Score: 227 bits (578), Expect = 1.380e-74
Identity = 112/135 (82.96%), Postives = 124/135 (91.85%), Query Frame = 0
Query:    1 MRPRNIIIKNLAEVEAAKAARPAVMKPQKVNGKWHMPKMSAKAIARRRKQYLKAGREWKWDIPHKIVEKRVPFKGHLRELRYRQRQEEIARCMARMPKLIEDYRKRTAERRRQKKYEGIEGLLRTPREIPGVKSR 135
            M+P+NI IKNLAEV AAKAARP VMKPQKVN KW MPKMSA AIARRRK+YLKAG+EW WDIPHKIVEKRVPFKGHLRELRYRQ++EEIARCMARMPKLIE+YRKRTAER+++KK EG+ GLLR PRE+PGV SR
Sbjct:    1 MKPKNITIKNLAEVVAAKAARPEVMKPQKVNDKWRMPKMSAMAIARRRKEYLKAGKEWPWDIPHKIVEKRVPFKGHLRELRYRQKKEEIARCMARMPKLIEEYRKRTAERKKKKKEEGLLGLLRKPREVPGVSSR 135          
BLAST of Gcaud3806.t1 vs. uniprot
Match: A0A2P6N142_9EUKA (Mitoc_mL59 domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N142_9EUKA)

HSP 1 Score: 60.5 bits (145), Expect = 1.430e-8
Identity = 35/89 (39.33%), Postives = 52/89 (58.43%), Query Frame = 0
Query:   26 KPQKVNGKWHMPKMSAKAIARRRKQYLKAGREWK-----WDIPHKIVEKRVPFKGHLRELRYRQRQEEIARCMARMPKLIEDYRKRTAE 109
            +P  VNG+W+ P +SA+ +A  RKQY   G E+      +++P       +  KGH        RQ++IA+ MA+MPKLIE++RK  AE
Sbjct:   30 RPHFVNGRWNKPALSARMVAEYRKQYFVRGLEFPEIPKGYEVPSTKPPAELKLKGHKHIREAPLRQQKIAQNMAKMPKLIEEFRKNKAE 118          
BLAST of Gcaud3806.t1 vs. uniprot
Match: A0A061R0U9_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R0U9_9CHLO)

HSP 1 Score: 58.5 bits (140), Expect = 2.180e-8
Identity = 39/107 (36.45%), Postives = 57/107 (53.27%), Query Frame = 0
Query:   23 AVMKPQKVNGKWHMPKMSAKAIARRRKQYLKAGREWKWDIPHKIVEKRVPFKGHLRELRYRQRQEEIARCMARMPKLIEDYRKRTAERRRQKKYEGIEGLLRTPREI 129
            A ++P  VNGKW  P +SAK +AR RK+ L AG+EW ++ P      + P KGH R     QR +++   +A M   I  YR    E  R K     + ++ TP++I
Sbjct:   13 AALQPTFVNGKWRKPAISAKNVARLRKEDLLAGKEWPYEKPRSDPPYKQP-KGHKRHKELEQRAKKVXXKLASMDDKIAQYR----ESVRIKDVLPFDQIMLTPKQI 114          
BLAST of Gcaud3806.t1 vs. uniprot
Match: A0A087SQM2_AUXPR (Uncharacterized protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SQM2_AUXPR)

HSP 1 Score: 54.7 bits (130), Expect = 6.370e-7
Identity = 36/107 (33.64%), Postives = 59/107 (55.14%), Query Frame = 0
Query:   23 AVMKPQKVNGKWHMPKMSAKAIARRRKQYLKAGREWKWDIPHKIVEKRVPFKGHLRELRYRQRQEEIARCMARMPKLIEDYRKRTAERRRQKKYEGIEGLLRTPREI 129
            A +KPQ V G WH  ++SAK +A+ R++ L A  +W+++   K  + R P KGH  + +   R   IA  +A M + IE +R      +R+ K   I+ L  TP+++
Sbjct:   12 AALKPQNVGGVWHKAQISAKNVAKLRREALLATGKWEFEPEPKEEKPRKPNKGHKHDRQKPARMRVIAENLAGMDERIEKHR----AAKREIKASLIDRLTMTPKQL 114          
BLAST of Gcaud3806.t1 vs. uniprot
Match: A0A3M7KZP9_AUXPR (Uncharacterized protein (Fragment) n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KZP9_AUXPR)

HSP 1 Score: 54.7 bits (130), Expect = 4.950e-6
Identity = 36/107 (33.64%), Postives = 59/107 (55.14%), Query Frame = 0
Query:   23 AVMKPQKVNGKWHMPKMSAKAIARRRKQYLKAGREWKWDIPHKIVEKRVPFKGHLRELRYRQRQEEIARCMARMPKLIEDYRKRTAERRRQKKYEGIEGLLRTPREI 129
            A +KPQ V G WH  ++SAK +A+ R++ L A  +W+++   K  + R P KGH  + +   R   IA  +A M + IE +R      +R+ K   I+ L  TP+++
Sbjct:    8 AALKPQNVGGVWHKAQISAKNVAKLRREALLATGKWEFEPEPKEEKPRKPNKGHKHDRQKPARMRVIAENLAGMDERIEKHR----AAKREIKASLIDRLTMTPKQL 110          
BLAST of Gcaud3806.t1 vs. uniprot
Match: A0A388KNE4_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KNE4_CHABU)

HSP 1 Score: 51.6 bits (122), Expect = 6.870e-6
Identity = 35/91 (38.46%), Postives = 51/91 (56.04%), Query Frame = 0
Query:   12 AEVEAAKAARPAVMKPQKVNGKWHMPKMSAKAIARRRKQYLKAGREWKWDIPHKIVEKRVPFKGHLRELRYRQRQEEIARCMARMPKLIED 102
            A++ A      A +KP   NGK+    MSAK IAR R+Q L  G EW +D P K ++ RV  KGH  +   + ++E+    M +MP+L+ D
Sbjct:    7 AQLAAGLKRLAAKVKPTWFNGKFVGTDMSAKNIARVRRQVLLVGEEWPYDKPRKEMKTRV--KGHKVDRIAQAKREKTKELMEQMPQLLAD 95          
The following BLAST results are available for this feature:
BLAST of Gcaud3806.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IPZ9_9FLOR1.380e-7482.96Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2P6N142_9EUKA1.430e-839.33Mitoc_mL59 domain-containing protein n=1 Tax=Plano... [more]
A0A061R0U9_9CHLO2.180e-836.45Uncharacterized protein n=1 Tax=Tetraselmis sp. GS... [more]
A0A087SQM2_AUXPR6.370e-733.64Uncharacterized protein n=1 Tax=Auxenochlorella pr... [more]
A0A3M7KZP9_AUXPR4.950e-633.64Uncharacterized protein (Fragment) n=1 Tax=Auxenoc... [more]
A0A388KNE4_CHABU6.870e-638.46Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043035Growth arrest and DNA damage-inducible proteins-interacting protein 1 domain superfamilyGENE3D6.10.280.120coord: 53..119
e-value: 3.0E-6
score: 29.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_71_length_56537_cov_4.318092contigNODE_71_length_56537_cov_4.318092:41101..41511 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3806.t1Gcaud3806.t1Gracilaria caudata M_176_S67 malemRNANODE_71_length_56537_cov_4.318092 41101..41511 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3806.t1 ID=Gcaud3806.t1|Name=Gcaud3806.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=137bp
MRPRNIIIKNLAEVEAAKAARPAVMKPQKVNGKWHMPKMSAKAIARRRKQ
YLKAGREWKWDIPHKIVEKRVPFKGHLRELRYRQRQEEIARCMARMPKLI
EDYRKRTAERRRQKKYEGIEGLLRTPREIPGVKSRF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043035Damage-induce-interact_sf