Gcaud3782.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3782.t1
Unique NameGcaud3782.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length201
Homology
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BLAST of Gcaud3782.t1 vs. uniprot
Match: A0A2V3IPD7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPD7_9FLOR)

HSP 1 Score: 104 bits (259), Expect = 1.200e-24
Identity = 57/127 (44.88%), Postives = 82/127 (64.57%), Query Frame = 0 
Query:   66 KCDDEVMHATADGRTPDWAQTKRRRRALAQTWSDIPDLVNLMVSFSVDESQLKAKESSRAPLDISSPTSISHGNKTYTTGKLVKKLNFEDSNIVGGDAQSDREATRKVT-GIEDSLLDSFRRVKIEQ 191
            +CDD V+HA+A GRTP+WA  KR RRAL  TWS+IPDLVNL+VSFSVDES++++   +     ++SPTS++  +  +    +VK LN+ED     G  +SD      V+   E  L+D+   +KIE+
Sbjct:   50 ECDDVVLHASASGRTPEWAHKKRCRRALVNTWSNIPDLVNLLVSFSVDESKVRSGHRTNPSRRLTSPTSVNIEDHIHNQVNVVKVLNYEDYTQNDGKHRSDGAVQALVSVKSEKPLVDALCGLKIEK 176
The following BLAST results are available for this feature:
BLAST of Gcaud3782.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IPD7_9FLOR1.200e-2444.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_55_length_62747_cov_4.797082contigNODE_55_length_62747_cov_4.797082:3496..4389 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3782.t1Gcaud3782.t1Gracilaria caudata M_176_S67 malemRNANODE_55_length_62747_cov_4.797082 3496..4389 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3782.t1 ID=Gcaud3782.t1|Name=Gcaud3782.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=201bp
MIVQISKEHDTPYPACELPMLRSPEHCDSSQEQTLSYKRNISRSKAGPML
DLTAHLFGPGLGILVKCDDEVMHATADGRTPDWAQTKRRRRALAQTWSDI
PDLVNLMVSFSVDESQLKAKESSRAPLDISSPTSISHGNKTYTTGKLVKK
LNFEDSNIVGGDAQSDREATRKVTGIEDSLLDSFRRVKIEQGNDEAEEIE
*
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