Gcaud3763.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3763.t1
Unique NameGcaud3763.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length318
Homology
BLAST of Gcaud3763.t1 vs. uniprot
Match: A0A2V3IY94_9FLOR (Regulator of nonsense transcripts 1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY94_9FLOR)

HSP 1 Score: 373 bits (958), Expect = 4.040e-116
Identity = 180/306 (58.82%), Postives = 227/306 (74.18%), Query Frame = 0
Query:    7 WKTSLFQLALFRNPWRRISNGLRFLSFPWFRKQTNQVQCLQTREHTANPELRSKPTRSPYDLVLFRRSRFVAHLNELSRRRSDSAPPRDESTALELALKSAGNAHEERVVAFLENILSISAYRIPFAHPDRYNMTIEAIRRREPIIAGAALHDDAFAGYADVLILSALDPYLTETQPANVDPNAYIVCEIKLSSFSTMDFLLQTAAYASMLSIIHKRLDIRHPSHAYLWLGSPENPPIRLDYRDLKYFFRRVKKDFLTFSQSFDESAPLPEPDAPLQMLSPWKTFAMETLNEADSLHLIAGIRQSQ 312
            W+ + F    FRNP R++    R    P  R   NQ +C+QT+E +  P  R KP+RSP+DLV FRRSRFVAHLNEL  RR D AP RDE+T LE AL+SAG  HEER++++LE++ + + YRIPFAHPDRY +T EAIRR+EP+IAGAAL DD   GYAD+L+LS++DPY+T  Q A+VDPNAYI CE+K SS  ++DF LQ A YASML  +H+RL IRHP +AYL LG P +PP RL++RDLKY FRRVK D+++F  +F+E  P+P PD P+  LSPW+T A ETL +ADSL LIAGIR SQ
Sbjct:    7 WRATFFHFPFFRNPLRQVVQRFRIPGSPGTRD--NQARCVQTKEPSQKPVARPKPSRSPHDLVSFRRSRFVAHLNELCHRRPDLAPERDETTTLEDALRSAGRVHEERLLSYLESLTATTVYRIPFAHPDRYKLTEEAIRRKEPLIAGAALRDDTLGGYADLLMLSSIDPYVTSGQQADVDPNAYIPCEVKFSSLISIDFALQVACYASMLQDVHRRLGIRHPDYAYLCLGPPHSPPTRLNFRDLKYLFRRVKNDYISFMSNFNECHPIPVPDGPIHTLSPWRTLAKETLEDADSLQLIAGIRTSQ 310          
BLAST of Gcaud3763.t1 vs. uniprot
Match: R7Q7W8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7W8_CHOCR)

HSP 1 Score: 67.0 bits (162), Expect = 1.430e-8
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 0
Query:  253 YFFRRVKKDFLTFSQSFDESAPLPEPDAPLQMLSPWKTFAMETLNEADSLHLIAGIRQSQCIEV 316
            Y   R K+DF  F + FD SA +  PD P++MLSPWK +A+E L E D L LIAGIR+SQ  ++
Sbjct:    2 YLLERTKRDFGVFLKEFDASAQVL-PDVPVEMLSPWKGYALEILQEKDDLRLIAGIRRSQVNQI 64          
BLAST of Gcaud3763.t1 vs. uniprot
Match: U4QVD0_9BACT (Uncharacterized protein n=2 Tax=Leptospirillum TaxID=179 RepID=U4QVD0_9BACT)

HSP 1 Score: 65.1 bits (157), Expect = 6.140e-8
Identity = 63/213 (29.58%), Postives = 98/213 (46.01%), Query Frame = 0
Query:  104 LKSAGNAHEERVVAFLEN----ILSISAYRIPFAHPDRYNMTIEAIRRREPIIAGAALHDDAFAGYADVLILSALDPYLTETQPANVDPNAYIVCEIKLSSFSTMDFLLQTAAYASMLSIIHKRLDIRHPSHAYLWLGSPENPPIRLDYRDLKYFFRRVKKDFLTFSQSFDESAPLPEPDAPLQMLSPWKTFAMETLNEADSLHLIAGIRQSQ 312
            L+  G  HE+  +  L++    +L I +  +     DR   T  A+     +I  AAL D ++  YAD L          ET P++    +Y V + KLS   T   ++Q   Y+ +L+    ++    P   +L LG   +   R+D  D  +++R +KK F TFSQS  E +  PEP A   +   WK        E D L L+A IR++Q
Sbjct:   48 LQEKGEEHEKAYLQKLKSNGHQVLEIPSSGLLL---DRTKATRNAMISGVEVIYQAALLDSSWHAYADFL-------KRIET-PSDFGNFSYEVIDTKLSRSPTSKHIIQLCVYSDLLA----KVQGFFPHLMHLVLGDGRDVSFRVD--DFHFYYRNLKKQFETFSQSPPEGS-YPEPCASCDLCR-WKELCARRWEEDDHLSLVANIRRNQ 241          
The following BLAST results are available for this feature:
BLAST of Gcaud3763.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IY94_9FLOR4.040e-11658.82Regulator of nonsense transcripts 1-like n=1 Tax=G... [more]
R7Q7W8_CHOCR1.430e-851.56Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
U4QVD0_9BACT6.140e-829.58Uncharacterized protein n=2 Tax=Leptospirillum Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_94_length_52825_cov_4.981075contigNODE_94_length_52825_cov_4.981075:13631..14666 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3763.t1Gcaud3763.t1Gracilaria caudata M_176_S67 malemRNANODE_94_length_52825_cov_4.981075 13631..14666 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3763.t1 ID=Gcaud3763.t1|Name=Gcaud3763.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=318bp
MLVETRWKTSLFQLALFRNPWRRISNGLRFLSFPWFRKQTNQVQCLQTRE
HTANPELRSKPTRSPYDLVLFRRSRFVAHLNELSRRRSDSAPPRDESTAL
ELALKSAGNAHEERVVAFLENILSISAYRIPFAHPDRYNMTIEAIRRREP
IIAGAALHDDAFAGYADVLILSALDPYLTETQPANVDPNAYIVCEIKLSS
FSTMDFLLQTAAYASMLSIIHKRLDIRHPSHAYLWLGSPENPPIRLDYRD
LKYFFRRVKKDFLTFSQSFDESAPLPEPDAPLQMLSPWKTFAMETLNEAD
SLHLIAGIRQSQCIEVN*
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