Gcaud3664.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud3664.t1
Unique Name	Gcaud3664.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	313

Homology

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BLAST of Gcaud3664.t1 vs. uniprot
Match: A0A2V3IW99_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW99_9FLOR)

HSP 1 Score: 105 bits (263), Expect = 7.050e-23
Identity = 86/229 (37.55%), Postives = 111/229 (48.47%), Query Frame = 0

Query:   83 NIHSDNAPHDPSADNTMESAPKSDAPPTADESEKKPIDAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVESDFELSPKRVTKKRKATTAAKXXXXXXXGKAQVKTRAPPANTAARNIKRSPAAAQRSVAKQKNTRATLSSASGKKRLGARIPVDSSALSSIASSAHKPRRPSLKPFPSPLIRSGLSRNASVPPLHAYLKK 311
            NI    AP DPSA+NTMES PKS+ P  A+E E   + +                                                           ESDFELSP++ TKKR A T AK       G+ Q    A P   A +  +++ +AA +S    K + +  S+ +GKKRLGARIP +S ALSS+++SA + +   LK  PSPLIRSGLSRNA+VP LHAYL K
Sbjct:   83 NIAMQKAPPDPSAENTMESVPKSEDPAVAEEKENNDLGSEIKSSPADEQHSTRISRSTRKQKTYAISDSESDASVHEDDDAYNSADDSPVEADG----ESDFELSPRKTTKKRTAVTQAKSPAPQKRGRTQ----ATPKKLAVKRTRQTASAAPKSSI-GKTSASKPSTVTGKKRLGARIPCNSFALSSLSASARRTQSTQLKSHPSPLIRSGLSRNAAVPRLHAYLGK 302

The following BLAST results are available for this feature:

BLAST of Gcaud3664.t1 vs. uniprot

BLAST of Gcaud3664.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IW99_9FLOR	7.050e-23	37.55	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..182

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_78_length_55752_cov_4.650078	contig	NODE_78_length_55752_cov_4.650078:46561..47591 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud3664.t1	Gcaud3664.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_78_length_55752_cov_4.650078 46561..47591 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud3664.t1 ID=Gcaud3664.t1|Name=Gcaud3664.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=313bp
MRRNRSSSYAESSDDDFALSDDEKSSSRLKRPRRTTTRPRRLAVRSPQSS
SFQLDENDDDDDVICVPDSLEQHNEQQPPPFTNIHSDNAPHDPSADNTME
SAPKSDAPPTADESEKKPIDAPPKSSSEKHSEQSKRSSRVLKKRKTYVIS
DSESEASAHEDDDAYNSADDSPPEEDDDVVESDFELSPKRVTKKRKATTA
AKRSTPPKKGKAQVKTRAPPANTAARNIKRSPAAAQRSVAKQKNTRATLS
SASGKKRLGARIPVDSSALSSIASSAHKPRRPSLKPFPSPLIRSGLSRNA
SVPPLHAYLKKN*