Gcaud3638.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3638.t1
Unique NameGcaud3638.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length250
Homology
BLAST of Gcaud3638.t1 vs. uniprot
Match: A0A2V3ITP5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITP5_9FLOR)

HSP 1 Score: 368 bits (944), Expect = 3.420e-125
Identity = 175/249 (70.28%), Postives = 202/249 (81.12%), Query Frame = 0
Query:    1 MPSVTRELDGVRVEYVSNAVKSWRLATNQSLDLRQLTVYDMDLVPATRPFWLHNVFQSTVTELPSWLKLAIREDQPVEPRKFTLGDDEHRVKWRSKEALDYAQVLRRCTEQANVEYIIIIQDDVLFREQMSEVISWCDQHLQDSFTVSQQGRPKQIRKCSASLFDLSDEKEDAHELRSSNMVARVWRRDFVGSMVRYISTNFDEAPVDWLADRRCRNQRRKNVVMEPNPVRHRGQVSSFPANQRESTIT 249
            MP+VTR  +G +VEYVSNAVKSWRLATN SLDLRQLTV+DMD  P   P WL  VFQ    ELP+WL+L +R+ +   PRKFTLGDDE RV WRSKEALDYA+VL+RC E  +V+YIII+QDDVLFR +M  V+ WCD+HL+D+F  +  GR K +RKCSASLFDL++EKED HELRSSNMVARVW+R+ V SMVRY   NFDEAPVDWLADRRC+NQRR+ VVMEPNPVRHRG VSSF AN RE TIT
Sbjct:  101 MPTVTRMREGRQVEYVSNAVKSWRLATNASLDLRQLTVFDMDKHPTAEPSWLQKVFQPGFKELPTWLRLEVRDGKITPPRKFTLGDDEQRVHWRSKEALDYAEVLQRCAEGTDVDYIIIVQDDVLFRSEMQHVLHWCDEHLEDAFVTNANGRLKAVRKCSASLFDLTNEKEDGHELRSSNMVARVWKRETVESMVRYFRANFDEAPVDWLADRRCKNQRRRTVVMEPNPVRHRGSVSSFAANAREGTIT 349          
BLAST of Gcaud3638.t1 vs. uniprot
Match: A0A7S1EUC6_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EUC6_9RHOD)

HSP 1 Score: 141 bits (355), Expect = 2.690e-37
Identity = 96/254 (37.80%), Postives = 131/254 (51.57%), Query Frame = 0
Query:    1 MPSVTRELDGVRVEYVSNAVKSWRLATNQSLDLRQLTVYDMDL--------VPATRPFWLHNVFQSTVTELPSWLKLAIREDQPVEPRKFTLGDDEHRVKWRSKEALDYAQVLRRCT-----EQANVEYIIIIQDDVLFREQMSEVISWCDQHLQDSFTVSQQGRPKQIRK-CSASLFDLSDEKEDAHELRSSNMVARVWRRDFVGSMVRYISTNFDEAPVDWLADRRCR-NQRRKNVVMEPNPVRHRGQVSSF 239
            +PSV R  +   +EY+S  + S+  + +    LR +T+Y+M          VP       H+   S        L +  R     EPR  T GD   RVKWRS EA DYAQVL+RC      +    +Y++IIQDDV F  +M  V +W          +    + K +++ CS SL+D  D++ED   LR+SNMVARVWR         Y+   FD +PVDWLA+  CR +  RK  VM PNPVRH G +S+F
Sbjct:   21 IPSVARPSN---IEYLSTLLSSY--SHHAPYGLRHITIYNMHPAHERLNYPVPQRLFQEFHSNQSSQYKNKQHTLSVRFRSGIRAEPRVQTHGDSLDRVKWRSYEAQDYAQVLQRCVIDNYQKYGEFQYVLIIQDDVEFTSEMENVYAW----------ILNASKDKAMKRFCSLSLYD-EDQEEDKGMLRASNMVARVWRVSSAMKFSGYVDAYFDRSPVDWLANDFCRWSGNRKTFVMVPNPVRHLGIISTF 258          
BLAST of Gcaud3638.t1 vs. uniprot
Match: A0A5J4YRG9_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRG9_PORPP)

HSP 1 Score: 138 bits (348), Expect = 7.120e-36
Identity = 89/232 (38.36%), Postives = 119/232 (51.29%), Query Frame = 0
Query:   13 VEYVSNAVKSWR----LATNQSLDLRQLTVYDMDLVPATRPFWLHNVFQSTVTELPSWLKLAIREDQPVEPRKFTLGDDEHRVKWRSKEALDYAQVLRRC-TEQANVEYIIIIQDDVLFREQMSEVISWCDQHLQDSFTVSQQGRPKQIRKCSASLFDLSDEKEDAHELRSSNMVARVWRRDFVGSMVRYISTNFDEAPVDWLADRRCRNQRRKNVVMEPNPVRHRGQVSSF 239
            VEY+S+ + S      LA N+   L  +TVY+M  VPA         F+S  +   +WL++ IR +   E R  T GD   RV WRSKEA DY   L+ C  E  +V Y  ++QDDV F E + ++ SW  Q            RP  +  CS SL+D         ELR+ NMVARVW R        YI   +D  PVDWLA   C+ +R+   VM PNP+ HRG++S+ 
Sbjct:   84 VEYLSSTLDSLAYQLDLAGNKPAWLDGVTVYNMH-VPAEEHVTPQRYFESKRSRR-AWLRVRIRNEPVREHRVMTHGDGIRRVVWRSKEAQDYELTLQMCMAENPHVTYFAVVQDDVEFNEGIRDLASWVAQRY---------SRPAAV--CSLSLYDEDSATPPNGELRADNMVARVWERSRAADFANYIYERYDVDPVDWLARSFCKRKRKPTRVMVPNPLSHRGEISTL 302          
The following BLAST results are available for this feature:
BLAST of Gcaud3638.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3ITP5_9FLOR3.420e-12570.28Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1EUC6_9RHOD2.690e-3737.80Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4YRG9_PORPP7.120e-3638.36Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF04666Glyco_transf_54coord: 78..137
e-value: 3.7E-6
score: 26.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..249
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..249
NoneNo IPR availablePANTHERPTHR12062:SF0ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 4-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE A-LIKEcoord: 81..243
IPR006759Glycosyl transferase family 54PANTHERPTHR12062N-ACETYLGLUCOSAMINYLTRANSFERASE VIcoord: 81..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_120_length_47600_cov_4.363763contigNODE_120_length_47600_cov_4.363763:12772..13521 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3638.t1Gcaud3638.t1Gracilaria caudata M_176_S67 malemRNANODE_120_length_47600_cov_4.363763 12772..13521 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3638.t1 ID=Gcaud3638.t1|Name=Gcaud3638.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=250bp
MPSVTRELDGVRVEYVSNAVKSWRLATNQSLDLRQLTVYDMDLVPATRPF
WLHNVFQSTVTELPSWLKLAIREDQPVEPRKFTLGDDEHRVKWRSKEALD
YAQVLRRCTEQANVEYIIIIQDDVLFREQMSEVISWCDQHLQDSFTVSQQ
GRPKQIRKCSASLFDLSDEKEDAHELRSSNMVARVWRRDFVGSMVRYIST
NFDEAPVDWLADRRCRNQRRKNVVMEPNPVRHRGQVSSFPANQRESTIT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006759Glyco_transf_54