Gcaud3630.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3630.t1
Unique NameGcaud3630.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length322
Homology
BLAST of Gcaud3630.t1 vs. uniprot
Match: A0A1X6NQQ7_PORUM (IU_nuc_hydro domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQQ7_PORUM)

HSP 1 Score: 233 bits (594), Expect = 2.820e-70
Identity = 127/311 (40.84%), Postives = 179/311 (57.56%), Query Frame = 0
Query:    9 VPIFVGSYYALMDQSNRDLDDSRMKRSYRSYIPFGPGGVLYSDVMYGMAQFLPQGRRAYDIRKTPDTDEASIHALVKHLDRTKPLEKITFLSIGTLTPFALMFSKRHIHKVKPLLRRVDGLYVMGGAVDVKGNIFSSTTNNKAEFNIFADPDGAELAFMDMRRY-MDITLCPLDAINDVPLTESMLSELYTKSKTPEAQLVGHMMKNLRDTWFKPNAFYQTAFLWDPSAAVAMLHPAVIRTRRKRMIRVVVEEGIDGPDQGWTKPCTSAEILEGTCAEIAVIESLNGKLVRHTLVETLQQRENSAELPLVC 318
            VP+ +GS+ AL D+ + +      +  YR  IP GP G LY+D ++G A  LPQ  RAYD+  TPDTD+ SI AL+  L       +I +LS+GTLT  A +F   +   + PLL R+  L +MGGAVDV GN+FS   N  AEFN++ DP GA +         + + L PLDA +D P+  ++L+ L     TPEAQ VG +M+ LR TWF P +F+ TA+LWDP+AA+ +  P V+       ++VV ++G  G   GWTK C +AE+  G C    V+  +NG  V   +   LQ   N+A   L+C
Sbjct:   84 VPVLIGSHVALSDERDANGTGLGPRLRYRDTIPVGPDGFLYADTVWGAAHLLPQSFRAYDVEGTPDTDDQSIPALLAVLAGLPIGRRIEWLSVGTLTMVAKLFRPPYAAALAPLLPRIQSLTIMGGAVDVAGNLFSLPNNTVAEFNMYNDPLGAHVGMAAAAAAGIPVRLVPLDATSDAPIARALLAALRDAPATPEAQFVGVVMEKLRRTWFDPPSFFSTAYLWDPTAAIVLHAPWVVTNASVTQVKVV-DDGPRGDLTGWTKRCDAAEVAAGECFPSVVVYDVNGGAVNKQVERLLQAPVNAAVRSLLC 393          
BLAST of Gcaud3630.t1 vs. uniprot
Match: A0A7S1JFC7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JFC7_9EUGL)

HSP 1 Score: 107 bits (267), Expect = 2.180e-22
Identity = 90/306 (29.41%), Postives = 130/306 (42.48%), Query Frame = 0
Query:   44 PGGVLYS-----------DVMYGMAQ-FLPQGRRAYDIRKTPDTDEASIHALVKHLDRTKPLEKITFLSIGTLTPFALMFSKRHIHKVKPLLRRVDGLYVMGGAVDVKGNIFSSTTNNKAEFNIFADPDGAELAFMDMRRYMDITLCPLDAINDVPLTESMLSELYTKSKTPEAQLVGHMMKNLRDTWFKP-NAFY--------------QTAFLWDPSAAVAMLHPAVIRTRRKRMIRVVVEEGIDGPDQGWTK--PCTSAEILEGTCAEIAVIESLNGKLVRHTLVETLQQRENSAELPLVCLD 320
            PGG  YS           + +YG  Q +LP     Y      DT  ++   L KH D        T L++G+LT      +K      K     +  +  M GAV+V+GN+FS   N KAEFN F DP  A+  F     +  ITL PLDA N VP+T   L  L ++  TPE + V  + + +R++WF   N FY                 F WDP AAV + HP  +  +   ++             GWT+  P  +A  +E   A     E    K +   + + L++   + + PL  LD
Sbjct:  133 PGGCTYSHAVPKATFLDTETLYGTGQTYLPYSPLVYYRNNLTDTPPSATEVLKKHADAAVD----TVLTLGSLTSLEEFRTKEPASFAK-----LKHIVAMFGAVEVRGNLFSVPVNKKAEFNAFLDPHAAQNVFAG-DNWESITLVPLDATNQVPMTPRYLDHL-SRLGTPEGRFVYELTRRVRNSWFAGLNGFYGLDENGVRTEQALADAYFFWDPLAAVVLTHPDSVEMKTGHILFCANASTPMLATDGWTQLVPAGTAGAVEVKYASGVTPEK--AKFMEDHIADMLERNGCNEDQPLPLLD 425          
BLAST of Gcaud3630.t1 vs. uniprot
Match: A0A5C7K4S3_9CHLR (IU_nuc_hydro domain-containing protein n=1 Tax=Thermomicrobiales bacterium TaxID=2482790 RepID=A0A5C7K4S3_9CHLR)

HSP 1 Score: 102 bits (254), Expect = 3.080e-21
Identity = 80/226 (35.40%), Postives = 112/226 (49.56%), Query Frame = 0
Query:   68 DIRKTPDTDEASIHALVKHLDRTKPLEKITFLSIGTLTPFALMFSKRHIHKVKPLLRRVDGLYVMGGAVDVKGNIFSSTTNNKAEFNIFADPDGAELAFMDMRRYMDITLCPLDAINDVPLTESMLSELYTKSKTPEAQLVGHMMKNLRDTWFKPNAFYQTAFLWDPSAAVAMLHPAVIRTRRKRMIRVVVEEGIDGPDQGWTKPCTSA-EILEGTCAEIAVIESL 292
            D RK  D D     AL     +  P E IT L++G LT                L+  ++ +YVMGGAVDV+G+ F S  N  AE+NIF+DP GA L F   +    ITL PLDA N+VP+T   ++ L  +  +P A+ V  +  N  ++  +   +Y     WDP AAV M  P ++ T   R + VV   G   P+ G TKP  +  EIL  T  +   +E +
Sbjct:  134 DGRKPADDDAV---ALFTSTVQNSP-EPITVLALGPLTNIGAALEA-----TPALVDNIEMIYVMGGAVDVEGS-FVSDANTSAEWNIFSDPHGAALTF---QSGAPITLVPLDATNEVPVTPEFVARLDAEKASPAAEFVAALFANNMES-IEGGGYY----FWDPLAAVVMADPGIV-TLTPRTVTVVDLPG--DPEDGRTKPDDNGVEILVATAPDAQALEDV 338          
BLAST of Gcaud3630.t1 vs. uniprot
Match: L8GQ41_ACACA (Inosineuridine preferring nucleoside hydrolase family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GQ41_ACACA)

HSP 1 Score: 101 bits (251), Expect = 1.310e-20
Identity = 79/261 (30.27%), Postives = 128/261 (49.04%), Query Frame = 0
Query:    9 VPIFVGSYYALMDQSNRDLDDSRMKRSYRSYIPFGPGGVLYSDVMYGMAQFLPQGRRAYDIRKT-----PDTDEASIHALVKHLDRTKPLEKITFLSIGTLTPFALMFSKRHIHKVKPLLRRVDGLYVMGGAVDVKGNIF---SSTTNNKAEFNIFADPDGAELAFMDMRRYMDITLCPLDAINDVPLTESMLSELYTKSK-TPEAQLVGHMMKNLRDTWFKPNAFYQTAFLWDPSAAVAMLHPAVIRTRRKRMIRVVVEE 260
            VP++ G  YA     + +LD       Y+  +P  P G +++D   G+ Q  P   R  D ++      P   +    A+ + +D       I FLS+GTLT    +F +        L +RVD +Y+MGGAV+V GN+F    +  N  AE NI+ DP+ A   F+     + ITL PLDA +D P+ +  ++EL  K++ T EA  V  ++  ++       AF     LWDP AA  +  P+++  +    + VV+++
Sbjct:  113 VPVWAGEAYA-----SAELDSGNYSCKYQKTVPLFPRGKVWADTAVGLNQRYP---RLTDPQRNYYPGFPQVYDRLPQAMAE-IDGP-----IVFLSLGTLTEIDYLFRR-----FPELKQRVDRIYIMGGAVNVPGNLFFPRGNVPNTYAECNIYLDPESARNVFISG---VPITLIPLDATDDFPIADDFIAELGQKARRTKEAGWVHALLATIK-------AFGSNISLWDPLAAGVLADPSIVVEQVTVNMTVVIDQ 344          
BLAST of Gcaud3630.t1 vs. uniprot
Match: UPI0013C3061C (nucleoside hydrolase n=1 Tax=Aggregatilinea lenta TaxID=913108 RepID=UPI0013C3061C)

HSP 1 Score: 99.8 bits (247), Expect = 2.390e-20
Identity = 68/187 (36.36%), Postives = 97/187 (51.87%), Query Frame = 0
Query:   94 EKITFLSIGTLTPFALMFSKRHIHKVKPLLRRVDGLYVMGGAVDVKGNIFSSTTNNKAEFNIFADPDGAELAFMDMRRYMDITLCPLDAINDVPLTESMLSELYTKSKTPEAQLVGHMMKNLRDTWFKPNAFYQTAFLWDPSAAVAMLHPAVIRTRRKRMIRVVVEEGIDGPDQGWTKPCTSAEILE 280
            EK+T L++G LT  A     + +     L+  ++ +YVMGGAVDV G+  S   N  AE+NI+ DP  A + F        ITL PLDA NDVPLT   L +L  + +TPEA+ +   + N  D + +   +Y     WDP AA  M  P  + T  +R + V+    + GPD G T P  +   +E
Sbjct:  144 EKVTVLALGPLTNIA-----QALDDTPSLIDNIEMIYVMGGAVDVPGSEVSEE-NTTAEWNIYCDPVAARMVF---ESGAPITLVPLDATNDVPLTMDFLQQLEAEKQTPEAEFIYTALSNSMD-FIESGGYY----FWDPLAAGIMADPG-LATLTEREVTVI---DVPGPDYGRTAPVGNGPRIE 312          
BLAST of Gcaud3630.t1 vs. uniprot
Match: A0A6F8T069_9GAMM (IU_nuc_hydro domain-containing protein n=1 Tax=Legionella antarctica TaxID=2708020 RepID=A0A6F8T069_9GAMM)

HSP 1 Score: 91.7 bits (226), Expect = 2.400e-17
Identity = 64/183 (34.97%), Postives = 95/183 (51.91%), Query Frame = 0
Query:   73 PDTDEASIHALVKHLDRTKPLEKITFLSIGTLTPFALMFSKRHIHKVKPLL--RRVDGLYVMGGAVDVKGNIFSSTT---NNKAEFNIFADPDGAELAFMDMRRYMDITLCPLDAINDVPLTESMLSELYTKSKTPEAQLVGHMMKNLRDTWFKPNAFYQTAFLWDPSAAVAMLHPAVIRTRR 250
            P+   +++  LVK L+ +   E+I  L+ G LT  A +  K       P L   +++ + +MGGAV ++GNI +  T   N  AE+NI+ADP  A++ F      + ITL PLDA N VP+T+     L  K + P  +L+  M+K L D       F Q   LWDP AA+  + P +  T R
Sbjct:  100 PNITNSAVDLLVKTLEDSN--ERIAILATGPLTNIAELIKKY------PQLAKEKIEKIVIMGGAVHIEGNIKALDTKSNNTVAEWNIYADPKAADIVFSST---IPITLVPLDATNQVPMTKEFFDSLIHKQQ-PALKLIYQMLKKLIDD-LSMETFLQQFCLWDPLAAMICIDPQIAITER 269          
BLAST of Gcaud3630.t1 vs. uniprot
Match: A0A662A950_9BACT (IU_nuc_hydro domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A662A950_9BACT)

HSP 1 Score: 90.9 bits (224), Expect = 4.220e-17
Identity = 56/173 (32.37%), Postives = 92/173 (53.18%), Query Frame = 0
Query:   69 IRKTPDTDEASIHALVKHLDR-TKPLEKITFLSIGTLTPFALMFSKRHIHKVKPLLRRVDGLYVMGGAVDVKGNI-FSSTTNNK-AEFNIFADPDGAELAFMDMRRYMDITLCPLDAINDVPLTESMLSELYTKSKTPEAQLVGHMMKNLRDTWFKPNAFYQTAFLWDPSAAV 238
            I   P  +E ++  ++ +L   +KP   I ++++G +T    +  +  +     L  +++ +Y+MGGAV+V GN+ +    +N  AE+NIF DPD A++ F   +  +++ L PLDA N+ P+TE   + L     TPEA  V  MM  L +        Y T + WDP AAV
Sbjct:  130 INPNPALEECAVDFIINYLGNLSKP---INYVALGPMTNLGQVLQQEPV-----LASKINAVYIMGGAVNVPGNLQYGGIEDNPYAEWNIFLDPDAADIVF---QSGINVVLIPLDATNNAPVTEDFYNRLTNDHTTPEADFVFEMMSELMEV-------YDTFYFWDPLAAV 284          
BLAST of Gcaud3630.t1 vs. uniprot
Match: A0A7W1S646_9CHLR (Nucleoside hydrolase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7W1S646_9CHLR)

HSP 1 Score: 89.7 bits (221), Expect = 8.690e-17
Identity = 73/241 (30.29%), Postives = 118/241 (48.96%), Query Frame = 0
Query:   60 LPQGRRAYDIRKTPDTDEASIHALVKHLDRTKPLEKITFLSIGTLTPFALMFSKRHIHKVKPLLRRVDGLYVMGGAVDVKGNI---FSSTTNNKAEFNIFADPDGAELAFMDMRRYMDITLCPLDAINDVPLTESMLSELYTKSKTPEAQLVGHMMKNLRDTWFKPNAFYQTAFLWDPSAAVAMLHPAVIRTRRKRMIRVVVEEGIDGPDQGWTKPCTSAEI---LEGTCAEIAVIESLNG 294
            LP+ +R+    ++P   +A    L+  + R  P EK+T L++  LT  A + +         L  +++ +Y+MGGA++V GN+      T N  AE+NI+ D   A++    +R    +TL PLDA N VPLT S  + L  + +TP A  V  ++K L     K  +  +T  LWD  AA    HP + +    R +RV   +G+        K C    +   ++ T  E+ V+ +LNG
Sbjct:   93 LPKAKRS----RSPQNSQA----LLTDVIRRSP-EKVTLLTLAPLTNIAEVLAAS-----PELADKIEMIYMMGGALNVPGNLAEMLPGTKNRFAEWNIYVDYYAADVI---LRSGAPVTLIPLDATNQVPLTTSFYTRLVYQPQTPAADFVMRVVKRL-----KMLSGQRTLTLWDLVAAAIATHPEIAQFET-RQLRVEQADGVTIGRVVEDKSCRPVRVCTAVDQTAVELIVLNTLNG 310          
BLAST of Gcaud3630.t1 vs. uniprot
Match: A0A2W4PAX1_9CHLR (IU_nuc_hydro domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W4PAX1_9CHLR)

HSP 1 Score: 88.2 bits (217), Expect = 4.760e-16
Identity = 67/200 (33.50%), Postives = 98/200 (49.00%), Query Frame = 0
Query:   94 EKITFLSIGTLTPFALMFSKRHIHKVKPLLRRVDGLYVMGGAVDVKGNIFSSTTNNKAEFNIFADPDGAELAFMDMRRYMDITLCPLDAINDVPLTESMLSELYTKSKTPEAQLVGHMMKNLRDTWFKPNAFYQTAFLWDPSAAVAMLHPAVIRTRRKRMIRVVVEEGIDGPDQGWTKPCTSA-EILEGTCAEIAVIESL 292
            E IT L++G LT  A             L+  +  + VMGGAVDV G+ F S  N  AE+NI+ADP  A L F      + ITL PLDA N+ P+T   ++ L    +T   ++V   + N +D+  +   +Y     WDP AAV + +P ++ T   R + V+    + G + G TKP  +  EI   T  +    E L
Sbjct:  177 EPITVLALGPLTNIAAALEA-----TPSLVDNIAEIVVMGGAVDVDGS-FVSEENTSAEWNIYADPHAARLTF---ESGVPITLVPLDATNETPVTPDFVTRLREAPQTAATEIVLAALANSQDS-IEAGGYY----FWDPLAAVVLTNPELV-TLETRDVTVI---DVPGNEYGRTKPVGNGPEIRVATAPDAEAFEQL 358          
BLAST of Gcaud3630.t1 vs. uniprot
Match: A0A363U9B9_9CHLR (Nucleoside hydrolase n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A363U9B9_9CHLR)

HSP 1 Score: 87.0 bits (214), Expect = 9.850e-16
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 0
Query:   94 EKITFLSIGTLTPFALMFSKRHIHKVKPLLRRVDGLYVMGGAVDVKGNI---FSSTTNNKAEFNIFADPDGAELAFMDMRRYMDITLCPLDAINDVPLTESMLSELYTKSKTPEAQLVGHMMKNLRDTWFKPNAFYQTAFLWDPSAAVAMLHPAVIRTRRKRMIRVVVEEGIDGPDQGWTKPCTSAEILEGTCAEIAVIESLNGKLVRHTLVETLQQRE 309
            +K+T L++G LT  A       +     L  +++ +Y+MGGAVDV GN+    +   N  AE+NI+ DP  A L F   R    +TL PLDA N  P+TE+ +  +    +TPEA+ V  ++       F     Y   + WD  +A  +   ++     K +I  VVEE  +G D G T+       + G  A I V  S +G+      ++TL   E
Sbjct:  151 DKMTILALGPLTNLA-----EALQTAPGLKDKIEMIYIMGGAVDVPGNVGYSHAGIDNPFAEWNIYVDPHAAALVF---RSGAPVTLVPLDATNHAPVTEAFVKRIKNDRQTPEARFVFDLLTRTEYHDFIRMGGY---YFWDTLSAAILTDNSLADFETKMLI--VVEE--EGSDSGRTQ-------VSGDGASIRVAVSADGERFEQLFLDTLNMPE 347          
The following BLAST results are available for this feature:
BLAST of Gcaud3630.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1X6NQQ7_PORUM2.820e-7040.84IU_nuc_hydro domain-containing protein n=1 Tax=Por... [more]
A0A7S1JFC7_9EUGL2.180e-2229.41Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A5C7K4S3_9CHLR3.080e-2135.40IU_nuc_hydro domain-containing protein n=1 Tax=The... [more]
L8GQ41_ACACA1.310e-2030.27Inosineuridine preferring nucleoside hydrolase fam... [more]
UPI0013C3061C2.390e-2036.36nucleoside hydrolase n=1 Tax=Aggregatilinea lenta ... [more]
A0A6F8T069_9GAMM2.400e-1734.97IU_nuc_hydro domain-containing protein n=1 Tax=Leg... [more]
A0A662A950_9BACT4.220e-1732.37IU_nuc_hydro domain-containing protein n=1 Tax=Bac... [more]
A0A7W1S646_9CHLR8.690e-1730.29Nucleoside hydrolase n=1 Tax=Anaerolineae bacteriu... [more]
A0A2W4PAX1_9CHLR4.760e-1633.50IU_nuc_hydro domain-containing protein n=1 Tax=Chl... [more]
A0A363U9B9_9CHLR9.850e-1631.05Nucleoside hydrolase n=1 Tax=Anaerolineales bacter... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001910Inosine/uridine-preferring nucleoside hydrolase domainPFAMPF01156IU_nuc_hydrocoord: 8..270
e-value: 2.4E-23
score: 83.2
IPR036452Ribonucleoside hydrolase-likeGENE3D3.90.245.10coord: 1..312
e-value: 2.3E-36
score: 127.9
IPR036452Ribonucleoside hydrolase-likeSUPERFAMILY53590Nucleoside hydrolasecoord: 8..305
NoneNo IPR availablePANTHERPTHR46692:SF1INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE FAMILY PROTEINcoord: 13..234
NoneNo IPR availablePANTHERPTHR46692INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE FAMILY PROTEINcoord: 13..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_938_length_15940_cov_4.442425contigNODE_938_length_15940_cov_4.442425:7960..8925 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3630.t1Gcaud3630.t1Gracilaria caudata M_176_S67 malemRNANODE_938_length_15940_cov_4.442425 7960..8925 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3630.t1 ID=Gcaud3630.t1|Name=Gcaud3630.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=322bp
MMGSRYASVPIFVGSYYALMDQSNRDLDDSRMKRSYRSYIPFGPGGVLYS
DVMYGMAQFLPQGRRAYDIRKTPDTDEASIHALVKHLDRTKPLEKITFLS
IGTLTPFALMFSKRHIHKVKPLLRRVDGLYVMGGAVDVKGNIFSSTTNNK
AEFNIFADPDGAELAFMDMRRYMDITLCPLDAINDVPLTESMLSELYTKS
KTPEAQLVGHMMKNLRDTWFKPNAFYQTAFLWDPSAAVAMLHPAVIRTRR
KRMIRVVVEEGIDGPDQGWTKPCTSAEILEGTCAEIAVIESLNGKLVRHT
LVETLQQRENSAELPLVCLDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001910Inosine/uridine_hydrolase_dom
IPR036452Ribo_hydro-like