Gcaud3621.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3621.t1
Unique NameGcaud3621.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length212
Homology
BLAST of Gcaud3621.t1 vs. uniprot
Match: A0A2V3J1V1_9FLOR (LMWPc domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1V1_9FLOR)

HSP 1 Score: 347 bits (889), Expect = 6.020e-119
Identity = 174/211 (82.46%), Postives = 192/211 (91.00%), Query Frame = 0
Query:    1 MSAFDTNPDFTTGDAFREWILARDRGETAHESSDAHSSCAASRVAVLFVGRDNSTVSAAAEAIFTDLCSRRALDCFSCHSAGTRVEVEGALPDHGFIEALRFKRGLDISRKMACALDKSDLESYNLIVCMDEHVRSELLFMVADEEGRYNDAMEERIVSLSSYCSSPKLRNMQFRSGKYSPDALNLVLAALVDACNGLLVSLIESPGVPPS 211
            M AF  NP+FTTGDAFREWILARDRGETA E+S AHSSCAASRVAVLFVG DNSTVSAAAEAIFTD+CSRRALDCFSCHS GT V++EG  PD  FIEALRFKRGLDISRKMACALDKSDLESYNL+VCM E VRS+LL+MVAD+EG++NDA E+ IV LSSYC +P+LR+MQFRSGK+SPDALNLV+AALVDACNGLLVSLIESP +PPS
Sbjct:   41 MCAFGDNPNFTTGDAFREWILARDRGETAREASHAHSSCAASRVAVLFVGDDNSTVSAAAEAIFTDMCSRRALDCFSCHSVGTGVKLEGEPPDQSFIEALRFKRGLDISRKMACALDKSDLESYNLVVCMTESVRSKLLYMVADKEGKHNDAAEDSIVVLSSYCLNPELRSMQFRSGKHSPDALNLVIAALVDACNGLLVSLIESPPIPPS 251          
BLAST of Gcaud3621.t1 vs. uniprot
Match: A0A7S1XIV5_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XIV5_9RHOD)

HSP 1 Score: 163 bits (413), Expect = 1.640e-46
Identity = 92/198 (46.46%), Postives = 133/198 (67.17%), Query Frame = 0
Query:    9 DFTTGDAFREWILARDRGETAHESSDAHSSCAASRVAVLFVGRDNSTVSAAAEAIFTDLCSRRALD-CFSCHSAGTRVEVEGALPDHGFIEALRFKRGLDISRKMACALDKSDLESYNLIVCMDEHVRSELLFMVADEEGRYNDAMEERIVSLSSYCSSPKLRNMQF-RSGKYSPDALNLVLAALVDACNGLLVSLIE 204
            + T GDA R+W+LA +R +++ +  +   S    +++VLFV  DN +VS  AEA+F DL  RR L+   SC+SAG  V V GA  D  F+EAL F+R LD+S   A   +  D+ SY+LIVCMDE  RS++++M A  +G+++  +EE+I  LSSYC   +LR+MQF  + +YS +AL LV++A+VDAC GLL +LIE
Sbjct:   72 EVTVGDAVRQWMLANERAQSSEQVKEKQRS---PKLSVLFVDVDNRSVSVVAEAVFADLVQRRGLEEKVSCYSAGVDVTV-GAPADARFVEALMFRRKLDVSGHSAIEFEPQDVSSYDLIVCMDERTRSQVIYMTAAPDGKHDVQVEEKIRLLSSYCMDDRLRSMQFPTNSQYSREALKLVMSAVVDACGGLLRALIE 265          
BLAST of Gcaud3621.t1 vs. uniprot
Match: A0A5J4YLQ1_PORPP (LMWPc domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YLQ1_PORPP)

HSP 1 Score: 127 bits (318), Expect = 2.310e-31
Identity = 82/205 (40.00%), Postives = 120/205 (58.54%), Query Frame = 0
Query:   11 TTGDAFREW-------ILARDRGETAHESSDAHSSCAASRVAVLFVGRDNSTVSAAAEAIFTDLCSRRALDC-FSCHSAGTRVEVEGALPDHGFIEALRFKRGLDISRKMACALDKSDLESYNLIVCMDEHVRSELLFMVADEEGRYNDAMEERIVSLSSYCSSPKLRNMQFRSGKYSPDALNLVLAALVDACNGLLVSLIESPG 207
            T  +A +EW       +  R +GE   ++  A  S       +LFV   N  +S  AEA+FTDLC RR ++  F  +SAGT+  V GA PD  FI AL F+R LDIS  +A   +  DL+SY+L+V   E V+S++L+M+A + G ++ A E +I  LSSY S P LRN Q+   +YS ++L  ++++LVD    LL +L+E  G
Sbjct:  177 TVSEALQEWRGADAASVEQRQKGEQREKARGAKES---RERKILFVDEFNLRISVVAEAMFTDLCVRRGIEARFFSYSAGTKATV-GAAPDADFINALWFRRKLDISNHLAVEFEPQDLDSYDLVVVPSEAVKSQILYMLAPD-GMHDTACESKIRVLSSYASGP-LRNKQWPDRQYSRESLKFLMSSLVDVLTQLLFTLLEEDG 375          
The following BLAST results are available for this feature:
BLAST of Gcaud3621.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J1V1_9FLOR6.020e-11982.46LMWPc domain-containing protein n=1 Tax=Gracilario... [more]
A0A7S1XIV5_9RHOD1.640e-4646.46Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A5J4YLQ1_PORPP2.310e-3140.00LMWPc domain-containing protein n=1 Tax=Porphyridi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023485Phosphotyrosine protein phosphatase ISMARTSM00226LMWPc_2coord: 44..201
e-value: 0.0076
score: -17.6
IPR023485Phosphotyrosine protein phosphatase IPFAMPF01451LMWPccoord: 46..142
e-value: 2.0E-10
score: 41.2
NoneNo IPR availableGENE3D3.40.50.2300coord: 28..204
e-value: 1.8E-20
score: 75.6
NoneNo IPR availablePANTHERPTHR47439LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATEDcoord: 27..203
IPR036196Phosphotyrosine protein phosphatase I superfamilySUPERFAMILY52788Phosphotyrosine protein phosphatases Icoord: 44..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_173_length_41010_cov_4.294826contigNODE_173_length_41010_cov_4.294826:12649..13284 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3621.t1Gcaud3621.t1Gracilaria caudata M_176_S67 malemRNANODE_173_length_41010_cov_4.294826 12649..13284 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3621.t1 ID=Gcaud3621.t1|Name=Gcaud3621.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=212bp
MSAFDTNPDFTTGDAFREWILARDRGETAHESSDAHSSCAASRVAVLFVG
RDNSTVSAAAEAIFTDLCSRRALDCFSCHSAGTRVEVEGALPDHGFIEAL
RFKRGLDISRKMACALDKSDLESYNLIVCMDEHVRSELLFMVADEEGRYN
DAMEERIVSLSSYCSSPKLRNMQFRSGKYSPDALNLVLAALVDACNGLLV
SLIESPGVPPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023485Ptyr_pPase
IPR036196Ptyr_pPase_sf