Gcaud3583.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud3583.t1 vs. uniprot
Match: A0A2V3J547_9FLOR (Small nuclear ribonucleoprotein-associated protein B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J547_9FLOR) HSP 1 Score: 255 bits (652), Expect = 4.780e-84 Identity = 144/205 (70.24%), Postives = 158/205 (77.07%), Query Frame = 0
Query: 1 MSLSKNSKMLQFINYRVRVTLDDRRTLVGRFLAFDKHMNVVLSDCEEFRKPKKTQKDQRRALGLILLRGESVVSMAVESPPAPKKGKRSATAAGLPVVERAPPGRGEAMRALAGPAPGLGGPAQPQLAAQPRMYAP------------PPYGRGVPAXXXXXXXXXXSYAPPPPTGAVAMGGVTDVMVNNGRPMGYGRGAPPPSG 193
MSLSKNS+MLQFINYRVRVTLDDRRTLVGRFLAFDKHMN+VLSDCEEFRK KKTQKD+RRALGL+LLRGE VVSMAVE+ PAPKKGKR+ATAAGLPV +RA PGRGE M AL PA GLGGPAQPQL+AQPRMYAP PPYGRGV X+ A PPP G +TDV ++ GR M +GRG PPP+G
Sbjct: 1 MSLSKNSRMLQFINYRVRVTLDDRRTLVGRFLAFDKHMNIVLSDCEEFRKAKKTQKDERRALGLLLLRGECVVSMAVENAPAPKKGKRTATAAGLPVADRAAPGRGEVMAALNAPAQGLGGPAQPQLSAQPRMYAPLPGAYPGSGVAPPPYGRGV------LPAAYXTAAAPPPRG------MTDVAMSGGRGMPFGRGVPPPNG 193
BLAST of Gcaud3583.t1 vs. uniprot
Match: R7QDE4_CHOCR (Sm protein, snRNP core protein, SmB n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDE4_CHOCR) HSP 1 Score: 206 bits (525), Expect = 1.030e-64 Identity = 111/150 (74.00%), Postives = 127/150 (84.67%), Query Frame = 0
Query: 1 MSLSKNSKMLQFINYRVRVTLDDRRTLVGRFLAFDKHMNVVLSDCEEFRKPKKTQKDQRRALGLILLRGESVVSMAVESPPAPKKGKRSATAAGLPVV--ERAPPGRGEAMRALAGPAPGLGGPA----QPQLAAQPRMYAPPPYGRGVP 144
MSL+K+SKMLQFINYR+R+TLDDRRTLVGRFLAFDKHMNVVL+DCEEFRK KK + ++RRALGL+LLRGESVVS+AVESPPAPKKGKRSATAAGL +P GRG A LAGPAPGLGG + QPQL++ P++Y PPPYGRG P
Sbjct: 1 MSLTKSSKMLQFINYRMRITLDDRRTLVGRFLAFDKHMNVVLADCEEFRKAKKAETEERRALGLVLLRGESVVSIAVESPPAPKKGKRSATAAGLTAQPDRPSPMGRGMAAPGLAGPAPGLGGGSLAAMQPQLSSNPQLYQPPPYGRGGP 150
BLAST of Gcaud3583.t1 vs. uniprot
Match: A0A0D3DF66_BRAOL (Small nuclear ribonucleoprotein-associated protein n=3 Tax=Brassica TaxID=3705 RepID=A0A0D3DF66_BRAOL) HSP 1 Score: 140 bits (354), Expect = 3.550e-38 Identity = 96/213 (45.07%), Postives = 120/213 (56.34%), Query Frame = 0
Query: 1 MSLSKNSKMLQFINYRVRVTLDDRRTLVGRFLAFDKHMNVVLSDCEEFRK--PKKTQK-----DQRRALGLILLRGESVVSMAVESPPAPKKGKRSATAAGLPVVERAPPGRG-------------EAMRALAGPAPGLGGPA----QPQLAAQP------RMYAPPPYGRGVPAXXXXXXXXXXSYAPPPPTGAVAMGGVTDVMVNNGRPMG 183
MS+SK+SKMLQFINYR+RVT+ D R L+G+F+AFD+HMN+VL DCEEFRK P K +K + RR LGL+LLRGE V+S+ VE PP P++ + A +G V A PG G +A LAGP G+GGPA QPQ++ P +M PPP GRG+P PPPP G G RPMG
Sbjct: 1 MSMSKSSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKINEEREDRRTLGLVLLRGEEVISITVEGPPPPEESRAKAGGSGGAV---AGPGMGRAAGRGVPTGPLVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVMRPPGQMLPPPPMGRGLPQ------------GPPPPYGMRPQFGGPXXXXYGQRPMG 198
BLAST of Gcaud3583.t1 vs. uniprot
Match: A0A7S0BJ51_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BJ51_9RHOD) HSP 1 Score: 140 bits (354), Expect = 5.230e-38 Identity = 84/167 (50.30%), Postives = 109/167 (65.27%), Query Frame = 0
Query: 1 MSLSKNSKMLQFINYRVRVTLDDRRTLVGRFLAFDKHMNVVLSDCEEFRKPKKTQKDQRRALGLILLRGESVVSMAVESPPAPKKGKRSATAAG-LPVVERAPPGRGEAMR--------ALAGPAPGLGGPA----QPQLAAQPRMYA-----------PPPYGRGV 143
MS+SK+SKMLQ++NYR+RVTLDD R LVG+FLAFDKHMN+VL +CEE++K KK ++ R+LGLILLRGE VVS+ VESPPA + ++ ++ G P P GRG L+GP G+GGPA QP ++AQP+MY PP YG G+
Sbjct: 29 MSISKSSKMLQYVNYRMRVTLDDGRMLVGKFLAFDKHMNLVLGNCEEWKKSKKKDTEEMRSLGLILLRGECVVSLTVESPPAEQDSRKRSSGKGPAPQGRGMPAGRGIPQGPPPGAPPVGLSGPVRGVGGPAPTTMQPHVSAQPQMYGGRGGSQMGAPGPPGYGGGM 195
BLAST of Gcaud3583.t1 vs. uniprot
Match: A0A7S0E0S6_9CRYP (Hypothetical protein (Fragment) n=2 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0E0S6_9CRYP) HSP 1 Score: 137 bits (344), Expect = 3.710e-37 Identity = 79/156 (50.64%), Postives = 109/156 (69.87%), Query Frame = 0
Query: 3 LSKNSKMLQFINYRVRVTLDDRRTLVGRFLAFDKHMNVVLSDCEEFRK-----PKKTQKDQRRALGLILLRGESVVSMAVES-PPAPKKGKRSATAAGLPVVERAPPGRG-------EAMRALAGPAPGLGGPAQPQLAAQPR-MYAPPPYGRGVP 144
++K+SK+LQ++NYR+RVT++D R LVG+F+AFDKHMN+VL DC+EFR+ K +++++R+LGL++LRGESVVS+ VES PP+ K R A G+ AP GRG +A LAGPA G+GGP Q+A Q R + APP GRG+P
Sbjct: 5 MTKSSKILQYVNYRMRVTIEDGRQLVGKFMAFDKHMNIVLGDCDEFRRLSVKGGKGEEREEKRSLGLVILRGESVVSLTVESKPPSEDKKNRLAAGVGMGPGVAAPGGRGLPMAPVGQAPAGLAGPARGVGGPGMMQMAPQGRGISAPPQMGRGMP 160
BLAST of Gcaud3583.t1 vs. uniprot
Match: A0A2I4FNI2_JUGRE (Small nuclear ribonucleoprotein-associated protein n=4 Tax=Fagales TaxID=3502 RepID=A0A2I4FNI2_JUGRE) HSP 1 Score: 139 bits (349), Expect = 3.750e-37 Identity = 83/156 (53.21%), Postives = 105/156 (67.31%), Query Frame = 0
Query: 1 MSLSKNSKMLQFINYRVRVTLDDRRTLVGRFLAFDKHMNVVLSDCEEFRK-----PKKTQKDQRRALGLILLRGESVVSMAVESPPAPKKGKRSATAAGL---PVVERAPPGRG-------EAMRALAGPAPGLGGPA----QPQLAAQPRMYAPP 137
MS+SK+SKMLQ+INYR+RVT+ D R LVG+F+AFD+HMN+VL DCEEFRK KKT + RR LGL+LLRGE V+SM VE PP P++ + A A P + RA GRG +A LAGP G+GGPA QPQ ++P++ APP
Sbjct: 1 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTDNEDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVNAAAMAGPGIGRAA-GRGIPTAPLIQAQPGLAGPVRGVGGPAPGMMQPQQMSRPQLSAPP 155
BLAST of Gcaud3583.t1 vs. uniprot
Match: UPI001C4E8A0F (small nuclear ribonucleoprotein-associated proteins B and B'-like n=4 Tax=Proteaceae TaxID=4328 RepID=UPI001C4E8A0F) HSP 1 Score: 138 bits (347), Expect = 8.640e-37 Identity = 82/157 (52.23%), Postives = 106/157 (67.52%), Query Frame = 0
Query: 1 MSLSKNSKMLQFINYRVRVTLDDRRTLVGRFLAFDKHMNVVLSDCEEFRK------PKKTQKDQRRALGLILLRGESVVSMAVESPPAPKKGKRSATAAGL---PVVERAPPGRG-------EAMRALAGPAPGLGGPA----QPQLAAQPRMYAPP 137
MS+SK+SKMLQ+INYR+RVT+ D R LVG+F+AFD+HMN+VL DCEEFRK K ++++RR LGL+LLRGE VVSM VE PP P++ + A A P + RA GRG +A LAGP G+GGPA QPQ++ P++ APP
Sbjct: 1 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNEEREERRTLGLVLLRGEEVVSMTVEGPPPPEESRAKAVGAAAMAGPGLGRAA-GRGIPTAPLVQAQPGLAGPVRGVGGPASNMMQPQISRPPQLSAPP 156
BLAST of Gcaud3583.t1 vs. uniprot
Match: A0A5K0WUU8_9MAGN (Sm domain-containing protein (Fragment) n=2 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K0WUU8_9MAGN) HSP 1 Score: 137 bits (345), Expect = 1.020e-36 Identity = 86/159 (54.09%), Postives = 107/159 (67.30%), Query Frame = 0
Query: 1 MSLSKNSKMLQFINYRVRVTLDDRRTLVGRFLAFDKHMNVVLSDCEEFRK--PKKTQK----DQRRALGLILLRGESVVSMAVESPPAPKKGKRSATAAGL-PVVERAPPGRG-------EAMRALAGPAPGLGGPA----QPQLAAQPRMY---APPP 138
MS+SK+SKMLQFINYR+RVT+ D R LVG+F+AFD+HMN+VL DCEEFR+ P K QK + RR LGL+LLRGE V+SM VE PP P++ + + AG P + RA GRG +A LAGP G+GGPA QPQ++ P Y APPP
Sbjct: 1 MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRRLPPVKGQKGEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKSVVAGAGPGIGRAA-GRGVPTAHLVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVSYPQPAPPP 158
BLAST of Gcaud3583.t1 vs. uniprot
Match: A0A4P1RS25_LUPAN (Small nuclear ribonucleoprotein-associated protein n=6 Tax=Lupinus TaxID=3869 RepID=A0A4P1RS25_LUPAN) HSP 1 Score: 137 bits (345), Expect = 1.560e-36 Identity = 85/158 (53.80%), Postives = 107/158 (67.72%), Query Frame = 0
Query: 1 MSLSKNSKMLQFINYRVRVTLDDRRTLVGRFLAFDKHMNVVLSDCEEFRK--PKKTQK-----DQRRALGLILLRGESVVSMAVESPPAPKKGKRSAT---AAGLPVVERAPPGRG-------EAMRALAGPAPGLGGPA----QPQLAAQPRMYAPP 137
MS+SK+SKMLQFINYR+RVT+ D R LVG+F+AFD+HMN+VL DCEEFRK P K +K + RR LGL+LLRGE V+SM VE PP P++ + A A G P + RA GRG +A LAGP G+GGPA QPQ++ P++ APP
Sbjct: 1 MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPAEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVNSAALGGPGLGRAA-GRGIPAAPVVQAQPGLAGPVRGVGGPAPGMMQPQISRPPQLSAPP 157
BLAST of Gcaud3583.t1 vs. uniprot
Match: M2XN13_GALSU (Small nuclear ribonucleoprotein B and B n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XN13_GALSU) HSP 1 Score: 135 bits (340), Expect = 1.700e-36 Identity = 80/156 (51.28%), Postives = 103/156 (66.03%), Query Frame = 0
Query: 1 MSLSKNSKMLQFINYRVRVTLDDRRTLVGRFLAFDKHMNVVLSDCEEFRKPKKTQKDQRRALGLILLRGESVVSMAVESPPAPKKGKRSATAAGLPVVERAPPGRGEAMR--------ALAGPAPGLGGPAQPQ-LAAQP---RMYAPPPYGRGVP 144
M++ +NSK+LQ+INYR+RV+LDD+R +VG+ LAFDKH+N+VL+DCEEFRK KK K+++RALGL+LLRGESV++M VESPP + ++ A P P GR M LAGP G+GGP PQ A P R AP P GVP
Sbjct: 1 MAVPRNSKLLQYINYRLRVSLDDQRVIVGQLLAFDKHLNLVLNDCEEFRKLKKQDKEEKRALGLVLLRGESVITMTVESPPPEQTTRKPAQRGPAPTGRGFPAGRAMPMAPPPAAVPAGLAGPVRGIGGPPPPQGRAVAPTIGRGAAPMPPPPGVP 156 The following BLAST results are available for this feature:
BLAST of Gcaud3583.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud3583.t1 ID=Gcaud3583.t1|Name=Gcaud3583.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=194bpback to top |