Gcaud3537.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3537.t1
Unique NameGcaud3537.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length445
Homology
BLAST of Gcaud3537.t1 vs. uniprot
Match: A0A2V3IRZ0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRZ0_9FLOR)

HSP 1 Score: 188 bits (477), Expect = 6.920e-51
Identity = 193/481 (40.12%), Postives = 244/481 (50.73%), Query Frame = 0
Query:    1 MVTVDMSKTRQQISKRKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQNWLEEEKRRDRQRQNGIVSPSTP----RVRFADNVSVTEIPTVPTHSLPKPVSSPTGVRLVREGADQPMAGVALMRGANGLCFSVLYADEDGYDEDDDPDFVPNALSDEIGIGLS-LP-TRPRRRIVPQSVPISTPSASAKPANPDTSHSPNASPTTXXXXXXXXXXXXTKPPN-NASSPKLNGIAKSSKRKRTHSQMLSAQHSAXXXXXXXXXXXXXXXXXXXXXXDPA----------ETKTSPAKPSDSPRRRKKKKR------KLI---HAGQ-------SPEQNGHHQPKSPASAVRQSHNDTNSNSPQPSFTSVKGEANKQNGELVNGDYDDSEIDAMFGEMVQRKAQIRSEQRSRKKADRPNGEKPVSDGHKGKSKR----KSPTRYTEEGFRIMSYDELKADQPAGLNGECPFDCSCCF 444
            MVTVDMSKTR QISKRKRR                                AVQ WLE+EKR  ++R+    SPSTP    RVRFA+NVSV EIPT P H LPKP SSP GVRL R+  D       L+R A  L F+ L++ ED YDE +DPDF+P   ++E G  L+ LP T P+RRI+   VP+   ++S +      S S N SP               KP    A SP      K+   ++     + A  +   XXXXXXXXXXXXXXXXXXXX             +  T P      P              KL+   H+ Q       SP++N     +  AS  +    D    + + +  S  GE ++ NG   + D +DSEID MFGE+V++KAQ + E+  R      + + P     K +  R    K PTRYTEEGFRIM+YDE+KADQP GLNGECPFDCSCC+
Sbjct:    1 MVTVDMSKTRLQISKRKRRIRRLQRRRIQKAQREHQAQFLAAGKAKESRQRAVQKWLEDEKRLAKRRETSSRSPSTPKRKPRVRFAENVSVAEIPTKPQHKLPKPTSSPIGVRLARDDDDNESPNRHLVRNATTLRFA-LFSSEDNYDESNDPDFIPG--TEEEGEELNPLPMTTPKRRIIAVPVPLENSASSGRQKILQASAS-NTSPRLTDRSQSHASPKAGKPKTIRAKSP-----IKTEFPEQCEPCTVDASPNGPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDKRVTLPNVNDAVPXXXXXXXXXXXXXXKLLNGQHSAQAGPTKLISPKKNDKDPDQKIASISKSLSGDEAKRNVKQNSPSGLGERSEGNGVDHSTDREDSEIDTMFGELVRQKAQKKLEKGRRVNLREDSIKSPKKQASKTEINRPQQKKGPTRYTEEGFRIMTYDEIKADQPLGLNGECPFDCSCCY 472          
BLAST of Gcaud3537.t1 vs. uniprot
Match: R7QJV1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJV1_CHOCR)

HSP 1 Score: 80.9 bits (198), Expect = 2.980e-13
Identity = 41/101 (40.59%), Postives = 66/101 (65.35%), Query Frame = 0
Query:  345 ANKQNGELVNGDYDDSE-IDAMFGEMVQRKAQIRSEQRSRKKADRPNGEKPVSDGHKGKSKRKSPTRYTEEGFRIMSYDELKADQPAGLNGECPFDCSCCF 444
            AN    +  + D DD E ID +F ++V+++A  ++ Q ++++ ++     P  +G K K  +  P RYT++G RI+SYD++ ADQP GLNG CPF+CSCC+
Sbjct:  213 ANGNGPKATSSDSDDEEEIDDLFDDLVKQRAANKATQLAQRQKEQQAKPSPKKNG-KTKKHQGLPARYTDDGLRILSYDDIAADQPKGLNGACPFECSCCY 312          
BLAST of Gcaud3537.t1 vs. uniprot
Match: A0A5J4YTE3_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTE3_PORPP)

HSP 1 Score: 72.0 bits (175), Expect = 1.090e-10
Identity = 27/44 (61.36%), Postives = 36/44 (81.82%), Query Frame = 0
Query:  401 GKSKRKSPTRYTEEGFRIMSYDELKADQPAGLNGECPFDCSCCF 444
            G++ +  P RYT+EG+R+ +YDE+ ADQP GLNG CP+DCSCCF
Sbjct:  193 GRNGKAGPARYTDEGYRVWTYDEIAADQPEGLNGPCPWDCSCCF 236          
BLAST of Gcaud3537.t1 vs. uniprot
Match: A0A7S3A2X9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A2X9_9RHOD)

HSP 1 Score: 68.9 bits (167), Expect = 8.810e-10
Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 0
Query:  410 RYTEEGFRIMSYDELKADQPAGLNGECPFDCSCCF 444
            RYTE+G RI +YD+LK DQP GLNG CPFDCSCCF
Sbjct:  180 RYTEDGLRIYTYDDLKRDQPEGLNGPCPFDCSCCF 214          
The following BLAST results are available for this feature:
BLAST of Gcaud3537.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IRZ0_9FLOR6.920e-5140.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QJV1_CHOCR2.980e-1340.59Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YTE3_PORPP1.090e-1061.36Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S3A2X9_9RHOD8.810e-1077.14Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013885Protein of unknown function DUF1764, eukaryoticPFAMPF08576DUF1764coord: 358..444
e-value: 4.4E-14
score: 53.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..284
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..444
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 37..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 46..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_237_length_34827_cov_4.750864contigNODE_237_length_34827_cov_4.750864:10155..11489 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3537.t1Gcaud3537.t1Gracilaria caudata M_176_S67 malemRNANODE_237_length_34827_cov_4.750864 10155..11489 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3537.t1 ID=Gcaud3537.t1|Name=Gcaud3537.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=445bp
MVTVDMSKTRQQISKRKRRIRRSQRRRLQKAHRQQQAQLLAAGAAKKARQ
QAVQNWLEEEKRRDRQRQNGIVSPSTPRVRFADNVSVTEIPTVPTHSLPK
PVSSPTGVRLVREGADQPMAGVALMRGANGLCFSVLYADEDGYDEDDDPD
FVPNALSDEIGIGLSLPTRPRRRIVPQSVPISTPSASAKPANPDTSHSPN
ASPTTSSPPHHKKSAQSTKPPNNASSPKLNGIAKSSKRKRTHSQMLSAQH
SASPDASPNASPNASPKASPSDSPDPAETKTSPAKPSDSPRRRKKKKRKL
IHAGQSPEQNGHHQPKSPASAVRQSHNDTNSNSPQPSFTSVKGEANKQNG
ELVNGDYDDSEIDAMFGEMVQRKAQIRSEQRSRKKADRPNGEKPVSDGHK
GKSKRKSPTRYTEEGFRIMSYDELKADQPAGLNGECPFDCSCCF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013885DUF1764_euk