Gcaud3530.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3530.t1
Unique NameGcaud3530.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length632
Homology
BLAST of Gcaud3530.t1 vs. uniprot
Match: A0A2V3IYG7_9FLOR (Pumilio-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYG7_9FLOR)

HSP 1 Score: 754 bits (1948), Expect = 4.560e-267
Identity = 380/568 (66.90%), Postives = 464/568 (81.69%), Query Frame = 0
Query:   65 RRELMNQAKAKWEQLRPRSTSKEKSVRLIQELLEMLQSRIVEFVFRHDGSRIVQWMLGEGNEKQRESVMKELMASADQQVTFGSGPFFTKLACDRFGSHLAFKMLRTASKKQRQVIFDKYLRGSTPELMRSRHGADVLDFAYQTTLSTRAKAELSVEMLYGKERKLFDSVRSKLFD-KVNESDKKRSRNVFARSLELLEESFRDVVVDSAGSVVNQLIDRENILRFEIVHAAIKDYFDVLVTSYPKGRAQELASLLGPAVVHIAHTKPGVQVAVQCVKLLDAKHRKKLIRGLKTHIRKLVEDEFGHRLIISLFEWVDDTRLVGNMIRTELFSASHLDAELNDGGDSQKSKSRGGRSRAEKKGKEKQEKA--RVDSEIEPGANIDLVYLRTVCTHRYAHMALLNLLVGRESRYFNPDMYGFVWEGVNVEKFGLMSKKEAEIRRRELLAAFDDGIREVMKREMRTLLMNHWSAAVVLGALLSETTSESVVSGIVSCLESEEGVSELAGNVCARKTLATIFKIGGSKTSCTVLDNCETEALRALLNSKGCETIGEHLARSSGRMEVRMLLE 629
            RRELM +A+ KWEQLRP+ST+K+KSV L+QELL+MLQ RI EFVFRHDGSRIVQWMLG GNE  + +VMKELM  A++Q   G+ PFF +LACDRFGSHLAFK+LRTASKK RQVIF KYLRG+  ELMRS+ GADVLDFAYQTTL+ ++KAELSVE+LY KERKLF++VR +LF+ +   +     RNVF  SL+LLEESFRDV  +SAGS ++QL+D+E +LRFEIVHAA+K+Y +V++  Y K RAQE+A LL P +VH AHTK GVQVAV CVKLLDAKHRKKL+RGLKTHIRKL+EDEFGHRLIISLFEWVDDTRLVG  +RTE+FSAS LDAELNDGG+ QK + RGGRSRAEKKGK  Q K+  +     E  ++ID+ Y++ +C H+Y  MAL+NLLVGR+SRYFNPDMYGF+WEG++ +KFG+ SKK+  +RRREL+    +G+R VM+ EM+ +LM HWSAAVV+GALLSE+TS+SV+ GIV CL  EE VSE+ G+ CARKTLAT+FK+GGSKTSC VLD C TE +RAL+   GC  IG+HLA+SSGR +V  LL+
Sbjct:   60 RRELMAKARQKWEQLRPKSTTKDKSVVLVQELLDMLQGRIAEFVFRHDGSRIVQWMLGAGNENHKAAVMKELMEGAEEQAASGANPFFVRLACDRFGSHLAFKILRTASKKDRQVIFGKYLRGNVSELMRSKSGADVLDFAYQTTLNPKSKAELSVELLYSKERKLFETVRKRLFEERRGGAAGVGGRNVFGESLDLLEESFRDVAAESAGSTISQLVDKEELLRFEIVHAAVKEYLEVVMKRYAKQRAQEMAELLAPTIVHFAHTKCGVQVAVACVKLLDAKHRKKLVRGLKTHIRKLLEDEFGHRLIISLFEWVDDTRLVGGTVRTEMFSASRLDAELNDGGEVQKRRPRGGRSRAEKKGKAAQGKSNEKWGGGAEGESDIDVEYMKGLCMHKYGRMALMNLLVGRDSRYFNPDMYGFIWEGIDEDKFGVTSKKDETVRRRELVETLAEGMRRVMRGEMKDMLMKHWSAAVVIGALLSESTSDSVIDGIVGCLAREESVSEVVGSTCARKTLATVFKLGGSKTSCAVLDGCATELVRALVRGAGCAAIGDHLAKSSGRKDVAQLLQ 627          
BLAST of Gcaud3530.t1 vs. uniprot
Match: S0F2V0_CHOCR (CPL domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F2V0_CHOCR)

HSP 1 Score: 587 bits (1514), Expect = 1.590e-201
Identity = 287/572 (50.17%), Postives = 417/572 (72.90%), Query Frame = 0
Query:   65 RRELMNQAKAKWEQLRPRSTSKEKSVRLIQELLEMLQSRIVEFVFRHDGSRIVQWMLGEGNEKQRESVMKELMASADQQVTFGSGPFFTKLACDRFGSHLAFKMLRTASKKQRQVIFDKYLRGSTPELMRSRHGADVLDFAYQTTLSTRAKAELSVEMLYGKERKLFDSVRSKLFDKVNESDKKRSR------NVFARSLELLEESFRDVVVDSAGSVVNQLIDRENILRFEIVHAAIKDYFDVLVTSYPKGRAQELASLLGPAVVHIAHTKPGVQVAVQCVKLLDAKHRKKLIRGLKTHIRKLVEDEFGHRLIISLFEWVDDTRLVGNMIRTELFSASHLDAELNDGGDSQKSKSRGGRSRAEKKGKEKQEKARVDSEIEPGANIDLVYLRTVCTHRYAHMALLNLLVGRESRYFNPDMYGFVWEGVNVEKFGLMSKKEAEIRRRELLAAFDDGIREVMKREMRTLLMNHWSAAVVLGALLSETTSESVVSGIVSCLESEEGVSELAGNVCARKTLATIFKIGGSKTSCTVLDNCETEALRALLNSKGCETIGEHLARSSGRMEVRMLLES 630
            RRE+M QAK  WEQLRP++TS +KSV+L+ ELL++L  RIVEFVFRHDGSRIVQWML +G+  Q+ SVMKEL+  + +    G  PFF KLACDR+G HLAFKMLR   KK++ +++D YLRG+  +L+R+ +GADVLDFA+QT L  + K EL +E+LY K+RKL D+ R+ +  + +E  +   +      ++FA SL+++ E+F   VVDSAG++++QL+D+E +LRFEI+HAA+K+Y  V++ SYPK +AQE+A LLGP +VH AH+KPG+ VA+ CVK+LDAKHRKK++R LKTHIRKL+EDE+GHRLI++LFEWVDDTRLVG  +  E+FS+S + AE+ +   + KS SRGG+S+A+KKGK+ +E  ++ ++      +D+ Y++T+C H+YA + +L+L  GR++RYFNPD+YG VW  V+ EKFG +SKK+ ++RR EL   F+  I ++M++++ +LL + WSA +VLGAL++ +TS +V +G+   L+ E+ +  L G+ CARKT+ T+FKIGG   +C VLD C    +R  +  +G   I  HL  S+ R +    L +
Sbjct:   41 RREVMAQAKTTWEQLRPKATSSDKSVKLVAELLKLLSGRIVEFVFRHDGSRIVQWMLADGDNAQKTSVMKELIEGSKKPAMEGEMPFFVKLACDRYGHHLAFKMLRVGDKKEKSLLYDNYLRGNVAQLIRNSYGADVLDFAFQTVLKAKEKTELVLELLYMKQRKLLDTFRTTILKEASEKTQSSVKPQPQPASIFAHSLDVVGETFASAVVDSAGTILSQLLDKEKLLRFEIIHAALKEYMLVVMESYPKEKAQEMAVLLGPVLVHFAHSKPGIFVAINCVKILDAKHRKKVVRALKTHIRKLLEDEYGHRLILALFEWVDDTRLVGKTVSAEIFSSSSMAAEMAEIEMASKSSSRGGKSKADKKGKQPKETTKISTK-----EVDMGYVKTMCQHKYARVPVLSLFFGRDTRYFNPDVYGVVWGEVDTEKFGQLSKKDVKVRREELRVVFEASICDLMRKDLVSLLQSRWSAPMVLGALVNSSTSGAVSTGLTEALKDEKNMKILTGDTCARKTVGTVFKIGGKGLACRVLDECGMSIIRKFVKREGSAAIARHLVNSAERDDANRALHA 607          
BLAST of Gcaud3530.t1 vs. uniprot
Match: A0A7S2ZU50_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZU50_9RHOD)

HSP 1 Score: 187 bits (474), Expect = 5.240e-48
Identity = 146/514 (28.40%), Postives = 238/514 (46.30%), Query Frame = 0
Query:   67 ELMNQAKAKWEQLRPRSTS-KEKSVRLIQELLEMLQSRIVEFVFRHDGSRIVQWMLGEGNEKQRESVMKELMASADQQVTFGSGPFFTKLACDRFGSHLAFKMLRTASKKQRQV--IFDKYLRGSTPELMRSRHGADVLDFAYQTTLSTRAKAELSVEMLYGKERKLFDSVRSKLFDKVNESDKKRSRNVFARSLELLEESFRDVVVDSAGSVVNQLIDRENILRFEIVHAAIKDYFDVLVTSYPKGRAQELASLLGPAVVHIAHTKPGVQVAVQCVKLLDAKHRKKLIRGLKTHIRKLVEDEFGHRLIISLFEWVDDTRLVGNMIRTELFSASHLDAELNDGGDSQKSKSRGGRSRAEKKGKEKQEKARVDSEIEPGANIDLVYLRTVCTHRYAHMALLNLLVGRESRYFNPDMYGFVWEGVNVEKFGLMSKKEAEIRRRELLAAFDDGIREVMKREMRTLLMNHWSAAVVL------GALLSETTSESVVSGIVSCLESE----EGVSELAG 567
            E   +AK  WE+LR R    K     L+ +++++L+  +  F  RHD +RIVQW+L  GN +QR  V++ L+            P    L+ DR+G H+    L      + +V  I++++ RG+   + ++   A+VLD  YQ   ++  + EL +E+L+GKE KL  S R K          K + +     +      F  V+ D   +++    ++E+ +R +IVH  +  +F +    + +  A E+A+L  P  +H+ HTK G    V C+KLLDAK+RKKLI+ ++  IRK+ ED +GH  I++L+E VDDT+L+                                            +KA +   I    + +L    T   HRYA + LLNLL   E RYFNP  Y F+W G         S K+   RR+EL       + E +++ +  LL +   + + L        L+ E     +++ +   L +E    EG  E +G
Sbjct:   64 ETAQEAKKLWEKLRNRKEKDKGSDTELVAKIIDVLRDDLNGFSHRHDTARIVQWVLKCGNREQRSEVVQGLL------------PHVLSLSSDRYGRHVVMSALTKGRATRGEVLAIYERF-RGNVYSMCKNNLSAEVLDQFYQMNTTSAQRRELCLELLHGKEGKLLSSFRQK----------KTTASSLEEVIAEAGPEFGKVLYDGTKAILIGFAEKESTVRLQIVHDVLH-HFLIYACEHDREGAAEMAALYAPVAIHLVHTKNGAASFVACLKLLDAKNRKKLIKSVQEDIRKISEDSYGHLTIMALYEHVDDTKLL--------------------------------------------QKAVLKPHIGKSDSEEL----TTLLHRYASLPLLNLLAPHEGRYFNPANYAFIWTGET------KSVKDDGKRRQELADFAIPLLIESVQKNVLELLCDPAGSKIFLELVVKDSPLIEELWKTEIMTKVADALTTELEPSEGGEESSG 499          
BLAST of Gcaud3530.t1 vs. uniprot
Match: A0A1Y1VS80_9FUNG (ARM repeat-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1VS80_9FUNG)

HSP 1 Score: 155 bits (393), Expect = 5.550e-37
Identity = 136/565 (24.07%), Postives = 246/565 (43.54%), Query Frame = 0
Query:   67 ELMNQAKAKWEQLRPRSTSKEKSVRLIQELLEMLQSRIVEFVFRHDGSRIVQWMLGEGNEKQRESVMKELMASADQQVTFGSGPFFTKLACDRFGSHLAFKMLRTASKKQRQVIFDKYLRGSTPELMRSRHGADVLDFAYQTTLSTRAKAELSVEMLYGKERKLFDSVRSKLFDKVNESDKKRSRNVFARSLELLEESFRDVVVDSAGSVVNQLIDRENILRFEIVHAAIKDYFDVLVTSYPKGRAQELASLLGPAVVHIAHTKPGVQVAVQCVKLLDAKHRKKLIRGLKTHIRKLVEDEFGHRLIISLFEWVDDTRLVGNMIRTELFSASHLDAELNDGGDSQKSKSRGGRSRAEKKGKEKQEKARVDSEIEPGANIDLVYLRTVCTHRYAHMALLNLLVGRESRYFNPDMYGFVWEGVNVEKFGLMSKKEAEIRRRELLAAFDDGIREVMKREMRTLLMNHWSAAVVLGALLSETTSESVVSGIVSCLESEEGV-SELAGNVCARKTLATIFKIGGSKTSCTVLDNCETEALRALLNSKGCETIGEHLARSSGRMEVRMLLES 630
            E+++QAK  WE++R +   K +  +LI +L+ +++ R+VE +F+HD SR++Q  L  GN + R  +  EL               + +L+   +G  +  K+L    K +  VI + Y  G   +L+R +  +++++ A+    +  A+    VE  YG E  LF S   K  D + +   ++  ++    L+ L E+            ++ ++D+  I    IVH A+ +Y    +T       QE+ +++   V  I HTK G QVA+ C+     K RK +++  K  ++K+ ++E+GH +++ LF+ VDDT LV   I +E+ +   LD  +ND                                                  +Y    +L LL GR  +Y +PD    +  G  V      SKKE   R +ELL A    + + +   + ++L   + + V      +    +S +   +  L +E+   + +  N  A +TL T+ +      S  +  + E     A+L++   +    H + S G   V  LLES
Sbjct:   55 EILSQAKKIWEKMRRKDVPKPEREKLISDLMALVKGRVVEVIFKHDASRVIQTCLKYGNPEHRNQIASELKGR------------YLELSKSMYGKFIVIKILHYCPKYREHVIKEFY--GKVRKLIRHKEASEIIEEAFGQ-FANSAQRHALVEEFYGPEFALFKSADKKSLDDILKEKPEKKESI----LKHLNET------------ISAILDKGTI-NHSIVHRAMYEY----LTHTDANGVQEMIAIIKEQVAEILHTKDGAQVAMLCLLYATPKDRKVIVKSFKPFVQKICQEEYGHMVLLRLFDVVDDTVLVNKNIISEICNT--LDEIVND--------------------------------------------------KYGRRVVLYLLAGRSPKYISPDNITLLQTGDEVR--ATTSKKEPAARSKELLNAISPALLKYVSENLGSMLREPFPSQVCFEVFRNAAGDKSALFDALKTLIAEDDEENHILENTIASRTLKTLIQSEYKSKSGEIKTDGEATIGPAILDAVQSQIA--HFSTSGGSFVVLALLES 527          
BLAST of Gcaud3530.t1 vs. uniprot
Match: A0A1S3JC21_LINUN (pumilio homolog 3 isoform X1 n=3 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JC21_LINUN)

HSP 1 Score: 153 bits (386), Expect = 2.870e-35
Identity = 122/475 (25.68%), Postives = 216/475 (45.47%), Query Frame = 0
Query:   67 ELMNQAKAKWEQLRPRSTSKEKSVRLIQELLEMLQSRIVEFVFRHDGSRIVQWMLGEGNEKQRESVMKELMASADQQVTFGSGPFFTKLACDRFGSHLAFKMLRTASKKQRQVIFDKYLRGSTPELMRSRHGADVLDFAYQTTLSTRAKAELSVEMLYGKERKLFDSVRSKLFDKVNESDKKRSRNVFARSLELLEE-SFRDVVVDSAGSVVNQLIDRENILRFEIVHAAIKDYFDVLVTSYPKGRAQ-ELASLLGPAVVHIAHTKPGVQVAVQCVKLLDAKHRKKLIRGLKTHIRKLVEDEFGHRLIISLFEWVDDTRLVGNMIRTELFSASHLDAELNDGGDSQKSKSRGGRSRAEKKGKEKQEKARVDSEIEPGANIDLVYLRTVCTHRYAHMALLNLLVGRESRYFNPDMYGFVWEGVNVEKFGLMSKKEAEIRRRELLAAFDDGIREVMKREMRTLLMNHWSAAVVLGAL 539
            E++ Q K  WE LR      E+  +L QEL+ M++ ++ E VF HD +R++Q ++  G+++QR  + +EL                 +L   ++ S    K+L+  +K Q+  +F K   G+  +++R    A VL++ Y    +T A+    +E  YG    LF                 +S NV      L E+ + RD+++ +    +  L+D+  +L   IVH A  +YF     +Y   +A+ ++  LL   +VH+ HT+ G +VA+ C+    AK RK +I+  K H+ KL ++E+GH ++++LF+ VDDT+L+   +  E+  +                                                    L  VC  +Y    LL LL  R+  YF+PD    V + + +      SKK+A +RR+ELL+A    + + +    + L+M++    ++L  L
Sbjct:  332 EVIQQTKKIWESLRRHDLKAEEKTKLCQELMNMVRGKVKELVFAHDTARVIQCLMKNGSQEQRTELFEELKDD------------LVELCKTKYSSFFVKKVLKYGTKAQKNAVF-KAFHGNVRKIVRHTVAAAVLEYGYNE-YATAAQRSALMEEFYGPSFALF-----------------KSPNVTTLEQILKEQPTRRDMILSNMKEAITPLVDK-TVLSHTIVHRAFFEYF-----TYASNKARMDMIELLRENIVHMVHTRDGSRVAMYCIWYGTAKDRKVIIKSFKGHVVKLCKEEYGHMVMLALFDAVDDTKLMEKAVLQEMLKS----------------------------------------------------LYEVCFDQYGLKVLLYLLSPRDQVYFHPD----VIKVLELGDANPNSKKDAAVRRKELLSAVSSPLLQFIVDHTKELVMSNSRLLLILDIL 713          
BLAST of Gcaud3530.t1 vs. uniprot
Match: A0A8B7Z137_ACAPL (pumilio homolog 3-like isoform X1 n=2 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Z137_ACAPL)

HSP 1 Score: 152 bits (383), Expect = 2.870e-35
Identity = 127/503 (25.25%), Postives = 224/503 (44.53%), Query Frame = 0
Query:   67 ELMNQAKAKWEQLRPRSTSKEKSVRLIQELLEMLQSRIVEFVFRHDGSRIVQWMLGEGNEKQRESVMKELMASADQQVTFGSGPFFTKLACDRFGSHLAFKMLRTASKKQRQVIFDKYLRGSTPELMRSRHGADVLDFAYQTTLSTRAKAELSVEMLYGKERKLFDSVRSKLFDKVNESDKKRSRNVFARSLELLEESFRDVVVDSAGSVVNQLIDRENILRFEIVHAAIKDYFDVLVTSYPKGRAQELASLLGPAVVHIAHTKPGVQVAVQCVKLLDAKHRKKLIRGLKTHIRKLVEDEFGHRLIISLFEWVDDTRLVGNMIRTELFSASHLDAELNDGGDSQKSKSRGGRSRAEKKGKEKQEKARVDSEIEPGANIDLVYLRTVCTHRYAHMALLNLLVGRESRYFNPDMYGFVWEGVNVEKFGLMSKKEAEIRRRELLAAFDDGIREVMKREMRTLLMNHWSAAVVLGALLSETTSESVVS-GIVSCLESEEGVSELAGN 568
            EL  +AK  W  +R ++ SKEK  +L+ EL  ++Q ++ E +  HD  R++Q  L  G++KQR+ +  E+   A++ +    G         ++  H   KMLR   K+ R  I   +  G   +L+R R  A+VL+ AY    + + ++ L +E  Y     +F    +   + + E +  + + +    L++L                +Q+I++ ++++  IVH A+ D+    +   P     EL   +   VVHI HT  G + A+ C+    AK RK +I+  KT + K+ ++EFGH ++++LF+ VDDT LV  +I  E+  +                                                    +  V   +Y    LL LL  R S +F+P +   + +G         SKKE E+RR+ELLAA  D +   +    + L  +  S+ ++L A+L+    + V     ++ L +EE +  LA +
Sbjct:  133 ELTQRAKTIWNTVREKNCSKEKRSKLLTELCGLIQGKVFELLSAHDTVRVIQCCLQFGSDKQRQEIFDEVK-DAEKILLLAKG---------KYSKHFVMKMLRYGKKEHRSYIMTCF-HGQVSKLVRHREAAEVLELAYNYHANAKQRSAL-LEEFYSPRFAIFKEEGTHTLEDILEKEPDKKQGIMEHMLKML----------------SQVIEK-SVVKHSIVHKALLDF----LVHAPAKMKTELIEGMRDVVVHILHTHDGARAAMHCLWFGTAKDRKAIIKSFKTFVVKICKEEFGHLVLLALFDCVDDTLLVRKVIIDEMMKS----------------------------------------------------ISEVAEDQYGRKVLLYLLSPRNSTHFHPQIVEILRKGDG----NPASKKETELRRKELLAAASDHLLSFVSENAKELTCSK-SSCLLLLAVLTHAKGDKVGGYQAIASLAAEEFIPALASD 545          
BLAST of Gcaud3530.t1 vs. uniprot
Match: UPI00074FB033 (pumilio domain-containing protein KIAA0020 homolog n=1 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FB033)

HSP 1 Score: 150 bits (378), Expect = 1.050e-34
Identity = 117/490 (23.88%), Postives = 215/490 (43.88%), Query Frame = 0
Query:   71 QAKAKWEQLRPRSTSKEKSVRLIQELLEMLQSRIVEFVFRHDGSRIVQWMLGEGNEKQRESVMKELMASADQQVTFGSGPFFTKLACDRFGSHLAFKMLRTASKKQRQVIFDKYLRGSTPELMRSRHGADVLDFAYQTTLSTRAKAELSVEMLYGKERKLFDSVRSKLFDKVNESDKKRSRNVFARSLELLEESFRDVVVDSAGSVVNQLIDRENILRFEIVHAAIKDYFDVLVTSYPKGRAQELASLLGPAVVHIAHTKPGVQVAVQCVKLLDAKHRKKLIRGLKTHIRKLVEDEFGHRLIISLFEWVDDTRLVGNMIRTELFSASHLDAELNDGGDSQKSKSRGGRSRAEKKGKEKQEKARVDSEIEPGANIDLVYLRTVCTHRYAHMALLNLLVGRESRYFNPDMYGFVWEGVNVEKFGLMSKKEAEIRRRELLAAFDDGIREVMKREMRTLLMNHWSAAVVLGALLSETTSESVVSGIVSCLESEE 560
            +AK  WE LR +    EK  +L+ EL E+L  +I    F HD +R++Q  +  GNEKQR+ V +EL  S            FT+L+  ++  ++  K+L   +K Q   I  K  +G   +++R    + V++FAY        +  L+ E LYG   +++ S      DKV E+  ++                R+ ++D    ++  +  +E +++  +VH    D+F     + PK R+ E+   +  AV+++AHT  G +VA+ C+     K RK +++ +KT++ K+   EF H ++++ F+ +DDT+LV  +I +E+  +                                                    L ++  ++Y    LL LL  R+  YF+P +   + +G         SKK+ ++RRRELL A    +   +      + M+  +  +V   L +           ++ L ++E
Sbjct:  123 KAKQIWEALRQKKCDLEKRKKLLSELQELLHGKIKSMAFAHDSTRVIQCYIRFGNEKQRQEVFEELKES------------FTELSKSKYSRNIVKKLLMYGTKPQVAEII-KSFKGKVRKMLRHAEASAVVEFAYNDKAILEQRNMLTQE-LYGNIFQVYKSSEHPTLDKVLEAHPEK----------------RETIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFF---THATPKQRS-EMTEAVREAVIYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVATGEFSHLVLLAAFDCIDDTKLVKQLIISEMSDS----------------------------------------------------LASIIQNKYGRKVLLYLLSPRDPTYFSPAIIKILQQGDG----NAYSKKDVDVRRRELLEAVSPSLLNYVNLHAEEMAMDKATCIMVTSILKASVGDIQPALNTIASLAAKE 522          
BLAST of Gcaud3530.t1 vs. uniprot
Match: A0A8D2L5V1_VARKO (Pumilio RNA binding family member 3 n=2 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2L5V1_VARKO)

HSP 1 Score: 148 bits (374), Expect = 3.510e-34
Identity = 118/494 (23.89%), Postives = 224/494 (45.34%), Query Frame = 0
Query:   67 ELMNQAKAKWEQLRPRSTSKEKSVRLIQELLEMLQSRIVEFVFRHDGSRIVQWMLGEGNEKQRESVMKELMASADQQVTFGSGPFFTKLACDRFGSHLAFKMLRTASKKQRQVIFDKYLRGSTPELMRSRHGADVLDFAYQTTLSTRAKAELSVEMLYGKERKLFDSVRSKLFDKVNESDKKRSRNVFARSLELLEESFRDVVVDSAGSVVNQLIDRENILRFEIVHAAIKDYFDVLVTSYPKGRAQELASLLGPAVVHIAHTKPGVQVAVQCVKLLDAKHRKKLIRGLKTHIRKLVEDEFGHRLIISLFEWVDDTRLVGNMIRTELFSASHLDAELNDGGDSQKSKSRGGRSRAEKKGKEKQEKARVDSEIEPGANIDLVYLRTVCTHRYAHMALLNLLVGRESRYFNPDMYGFVWEGVNVEKFGLMSKKEAEIRRRELLAAFDDGIREVMKREMRTLLMNHWSAAVVLGALLSETTSESVVSGIVSCLESEE 560
            +++ + K  WE LR +  +KEK  +L+ EL E+L+ +I    F HD +R++Q  +  G+EKQR+ V +EL  S            F +L+  ++  ++  K+L   +K Q   I  K  +G   +++R    + V+++AY        +  L+ E LYG   ++  S   +  ++V E+  ++                R+ ++D    ++  +  +E +++  +VH    D+F   + + PK R+ E+   +  AV+++AHT  G +VA+ C+     K RK +++ +KT+I K+   EF H ++++ F+ +DDT+LV  +I +E+                                         DS            L ++  ++Y    LL LL  R+  YF+P +   + +G         SKK+ +IRRRELL A    + + +      ++M+  +  VV G L +          +++ L + E
Sbjct:  120 DVVLKGKQIWETLRRKDCNKEKRKKLLGELQELLRGKIKNMAFAHDSTRVIQCYIQFGDEKQRQEVFEELRES------------FIELSKSKYSRNIVKKLLVYGTKPQIAEII-KSFKGEVRKMLRHAEASAVVEYAYNDKAILEQRNMLTEE-LYGNTFQVCKSSEHRTLNEVLEARPEK----------------RESIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFF---IHAVPKQRS-EMIEAIREAVIYLAHTHDGARVALHCLWHGTPKDRKVIVKTMKTYIEKIATGEFSHLVLLAAFDCIDDTKLVKQLIISEI----------------------------------------TDS------------LTSIINNKYGRKVLLYLLSPRDPTYFSPAIIKILQQGDG----NTCSKKDTDIRRRELLEAVSPALLKYLNLHTEEMVMDKATFIVVTGILKTAVGDVQPAMKVIASLAARE 523          
BLAST of Gcaud3530.t1 vs. uniprot
Match: A0A2D4LHM1_9SAUR (PUM-HD domain-containing protein (Fragment) n=11 Tax=Serpentes TaxID=8570 RepID=A0A2D4LHM1_9SAUR)

HSP 1 Score: 148 bits (374), Expect = 3.980e-34
Identity = 115/473 (24.31%), Postives = 215/473 (45.45%), Query Frame = 0
Query:   67 ELMNQAKAKWEQLRPRSTSKEKSVRLIQELLEMLQSRIVEFVFRHDGSRIVQWMLGEGNEKQRESVMKELMASADQQVTFGSGPFFTKLACDRFGSHLAFKMLRTASKKQRQVIFDKYLRGSTPELMRSRHGADVLDFAYQTTLSTRAKAELSVEMLYGKERKLFDSVRSKLFDKVNESDKKRSRNVFARSLELLEESFRDVVVDSAGSVVNQLIDRENILRFEIVHAAIKDYFDVLVTSYPKGRAQELASLLGPAVVHIAHTKPGVQVAVQCVKLLDAKHRKKLIRGLKTHIRKLVEDEFGHRLIISLFEWVDDTRLVGNMIRTELFSASHLDAELNDGGDSQKSKSRGGRSRAEKKGKEKQEKARVDSEIEPGANIDLVYLRTVCTHRYAHMALLNLLVGRESRYFNPDMYGFVWEGVNVEKFGLMSKKEAEIRRRELLAAFDDGIREVMKREMRTLLMNHWSAAVVLGAL 539
            +++ + K  WE LR ++  KEK  +L+ +L ++L  +I +  F HD +R++Q  +  GNEKQR+ V +EL  S            FT+L+  ++  ++  K+L   +K Q   I  K  +G   +++R    + V+++AY        +  L+ E LYG   +++               K   ++   + LE+  E  R+ ++D    ++  +  +E +++  +VH    D+F   +   PK R+ E+   +  AV+++AHT  G +VA+ C+     K RK +++ +KT++ K+   EF H ++++ F+ +DDT+L+  +I +EL                                                 N     L TV  ++Y    LL LL  R+  YF+P +   + +G         SKK+A++R  ELL A    + + +      ++M+  +  VV G L
Sbjct:  136 DIIIKGKQIWETLRRKNCDKEKRKKLLSDLQKLLHGKIKDMAFAHDSTRVIQCYIQFGNEKQRQEVFEELKES------------FTELSKSKYSRNIVKKLLMYGTKPQIGEII-KSFKGEVKKMLRHAEASAVVEYAYNDKAILEQRNMLTEE-LYGNTFQVY---------------KTADQSTLGQVLEIQPEK-REAIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAI---PKQRS-EMIEAIREAVIYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKIATGEFSHLVLLAAFDCIDDTKLMKQLILSEL-----------------------------------------------NGN-----LATVINNKYGRKVLLYLLSPRDPTYFSPAIIKILQQGNE----NAHSKKDADVRHNELLEAISPPLLQHLGAHAEEMVMDKAAFIVVTGIL 518          
BLAST of Gcaud3530.t1 vs. uniprot
Match: A0A4W3HKH4_CALMI (PUM-HD domain-containing protein n=5 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3HKH4_CALMI)

HSP 1 Score: 147 bits (372), Expect = 6.860e-34
Identity = 136/603 (22.55%), Postives = 254/603 (42.12%), Query Frame = 0
Query:   67 ELMNQAKAKWEQLRPRSTSKEKSVRLIQELLEMLQSRIVEFVFRHDGSRIVQWMLGEGNEKQRESVMKELMASADQQVTFGSGPFFTKLACDRFGSHLAFKMLRTASKKQRQVIFDKYLRGSTPELMRSRHGADVLDFAYQTTLSTRAKAELSVEMLYGKERKLFDSVRSKLFDKVNESDKKRSRNVFARSLELLEESFRDVVVDSAGSVVNQLIDRENILRFEIVHAAIKDYFDVLVTSYPKGRAQELASLLGPAVVHIAHTKPGVQVAVQCVKLLDAKHRKKLIRGLKTHIRKLVEDEFGHRLIISLFEWVDDTRLVGNMIRTELFSASHLDAELNDGGDSQKSKSRGGRSRAEKKGKEKQEKARVDSEIEPGANIDLVYLRTVCTHRYAHMALLNLLVGRESRYFNPDMYGFVWEGVNVEKFGLMSKKEAEIRRRELLAAFDDGIREVMKREMRTLLMNHWSAAVV---LGALLSET----------TSESVVSG----------------IVSCLESEEG-VSELAGNVCARKTLATIFKIGGSKT----------SCTVLDNCETEALRALLNSKGCETIGEHLARSSGRMEVRMLLE 629
            +L+ ++K  WE +R +  +KEK   L++EL ++L  +I +  F HD +R++Q  +  G E+QR+ V +EL                 +L+  ++G H+  K L   +K+Q   I  K  +G   +++R    + +++FAY    +   +  L  E LYG +  +  S      D+V ES+                  +R+ +++    ++  +  +E +++  +VH    D+F       P     E+   +  AV+++AHT  G +VA+ C+     K RK +++ +KT + K    EF H ++++ F+ +DDT+LV  +I +E+ S+                                                    L ++  ++Y    LL LL  R+  +  P++   + EG         SKK+AE+RR ELL A    + E ++   R ++MN+ ++ +V   LG  L +            +E+ V G                ++  L  ++G + EL    C  +TL     I   KT           C +L + + +    +   KG +++   L ++     V MLLE
Sbjct:  130 DLVIRSKQIWESVRRKDCTKEKRAELMKELQKLLHGKIKDVAFAHDSTRVIQCYIQFGEEEQRKEVFEELKEH------------LIELSKSKYGRHIVKKFLMYGNKQQVAEII-KSFKGEVKKMLRHSEASSIVEFAYNDK-AVLEQRNLLTEELYGTKFMICKSAACPTLDQVLESN----------------PDWREGILEEMKQILAPMAQKEAVIKHSLVHKVFLDFF----RHCPAKLRSEMIEAVREAVIYLAHTHDGARVAMHCLWHGTTKDRKVIVKTMKTFVEKSASGEFSHLVLLAAFDCIDDTKLVKQIIISEIISS----------------------------------------------------LPSLINNKYGKKVLLYLLSPRDPGHIVPEIIKLLQEGDG----NAYSKKDAEVRRHELLEAISPALLEYLQENAREVVMNNATSVIVADILGCALGDVQPVIKAIANVAAETFVPGGQEGKLHMAEHPAGHLVLKWLIEQDGKLKELGKPECFARTLVECVGIENLKTWAQVNRGAIVLCCLLQSKDEDVANTM--KKGLKSLVPKLQKTKSLKGVEMLLE 640          
The following BLAST results are available for this feature:
BLAST of Gcaud3530.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYG7_9FLOR4.560e-26766.90Pumilio-like n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
S0F2V0_CHOCR1.590e-20150.17CPL domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A7S2ZU50_9RHOD5.240e-4828.40Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A1Y1VS80_9FUNG5.550e-3724.07ARM repeat-containing protein n=1 Tax=Basidiobolus... [more]
A0A1S3JC21_LINUN2.870e-3525.68pumilio homolog 3 isoform X1 n=3 Tax=Lingula ungui... [more]
A0A8B7Z137_ACAPL2.870e-3525.25pumilio homolog 3-like isoform X1 n=2 Tax=Acanthas... [more]
UPI00074FB0331.050e-3423.88pumilio domain-containing protein KIAA0020 homolog... [more]
A0A8D2L5V1_VARKO3.510e-3423.89Pumilio RNA binding family member 3 n=2 Tax=Varanu... [more]
A0A2D4LHM1_9SAUR3.980e-3424.31PUM-HD domain-containing protein (Fragment) n=11 T... [more]
A0A4W3HKH4_CALMI6.860e-3422.55PUM-HD domain-containing protein n=5 Tax=Callorhin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001313Pumilio RNA-binding repeatSMARTSM00025pum_5coord: 99..134
e-value: 0.81
score: 18.7
coord: 318..353
e-value: 120.0
score: 4.6
coord: 147..182
e-value: 0.0032
score: 26.7
coord: 354..390
e-value: 73.0
score: 6.2
IPR001313Pumilio RNA-binding repeatPFAMPF00806PUFcoord: 113..137
e-value: 0.028
score: 14.2
coord: 154..182
e-value: 0.33
score: 10.7
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 98..134
score: 8.477259
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 143..182
score: 8.197282
IPR012959CPL domainPFAMPF08144CPLcoord: 456..558
e-value: 7.5E-14
score: 52.3
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 71..399
e-value: 1.1E-34
score: 121.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 405..434
NoneNo IPR availablePANTHERPTHR13389:SF0PUMILIO HOMOLOG 3coord: 16..611
IPR040059Pumilio homologue 3PANTHERPTHR13389UNCHARACTERIZEDcoord: 16..611
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 81..476

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_25_length_75543_cov_4.432116contigNODE_25_length_75543_cov_4.432116:69958..71853 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3530.t1Gcaud3530.t1Gracilaria caudata M_176_S67 malemRNANODE_25_length_75543_cov_4.432116 69958..71853 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3530.t1 ID=Gcaud3530.t1|Name=Gcaud3530.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=632bp
MDTENRTTDIGEEPEKNVDDNNVKPTRKKRSPSEIKESANKKPRKSPNSS
KQAEKPQRATRREERRELMNQAKAKWEQLRPRSTSKEKSVRLIQELLEML
QSRIVEFVFRHDGSRIVQWMLGEGNEKQRESVMKELMASADQQVTFGSGP
FFTKLACDRFGSHLAFKMLRTASKKQRQVIFDKYLRGSTPELMRSRHGAD
VLDFAYQTTLSTRAKAELSVEMLYGKERKLFDSVRSKLFDKVNESDKKRS
RNVFARSLELLEESFRDVVVDSAGSVVNQLIDRENILRFEIVHAAIKDYF
DVLVTSYPKGRAQELASLLGPAVVHIAHTKPGVQVAVQCVKLLDAKHRKK
LIRGLKTHIRKLVEDEFGHRLIISLFEWVDDTRLVGNMIRTELFSASHLD
AELNDGGDSQKSKSRGGRSRAEKKGKEKQEKARVDSEIEPGANIDLVYLR
TVCTHRYAHMALLNLLVGRESRYFNPDMYGFVWEGVNVEKFGLMSKKEAE
IRRRELLAAFDDGIREVMKREMRTLLMNHWSAAVVLGALLSETTSESVVS
GIVSCLESEEGVSELAGNVCARKTLATIFKIGGSKTSCTVLDNCETEALR
ALLNSKGCETIGEHLARSSGRMEVRMLLESQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001313Pumilio_RNA-bd_rpt
IPR012959CPL_dom
IPR011989ARM-like
IPR040059PUM3
IPR016024ARM-type_fold