Gcaud3527.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3527.t1
Unique NameGcaud3527.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length585
Homology
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BLAST of Gcaud3527.t1 vs. uniprot
Match: A0A2V3IYI3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYI3_9FLOR)

HSP 1 Score: 135 bits (339), Expect = 2.030e-30
Identity = 114/323 (35.29%), Postives = 170/323 (52.63%), Query Frame = 0 
Query:    1 LAASKPAPLVNKRDTPAIFNGPEAVLAVLLAAAALLADFVRNVARLSAAG--AKQTLDLNAAESTVAELREALRISREVLDETQNRLTAVSDQRAD----AQLAVAEADQMRQKMDSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETQIAEKRLLLDQLCEQIETARDTEMKLKQRLEHQQALLTKQMQQTGNMPDTIAAGTEAEDA-TLRGGDASRSEMSLQEIKRNLNAERLALSADVREAQVASEAMTQEKVDELQLLKREMKAKRDGIRARLKKAQTTVDREENEIQRREEAIDQILGSIETPD 316
            ++A +   +      P++FNGPEAVL VLLAA ALL+DF RN A L A    A +        +   EL+  L  +R++L+++Q+ L   +   AD    A LAV ++  M   M                                               ++A+K+  +D L +QI          +Q L+ +    ++Q++Q     +   A TE E   T  GGD +RSEMSL+EIK NL AE+LALSA++ +AQV S+ ++Q++VD L +LKREMKAK+D  ++RL KAQTTV++EE  I+RR++AID +L SI  P+
Sbjct:   51 ISAPQQGAITTPHRAPSLFNGPEAVLGVLLAAVALLSDFARNFATLVATPRPASEHSKFPFLHACAHELQATLSRTRQLLEQSQHILQNGASHAADGDKNALLAVRQS--MDDVMVQVHRCNQRAQQQLNDLQNALRTSSQNVLVQSSAQADAQAEVQRLRAELADKQASIDALTDQINR--------QQHLDDR----SEQLEQVVQRLERNRASTEGEPGQTSGGGDPARSEMSLKEIKLNLKAEQLALSAEIAQAQVDSDVLSQDEVDALDMLKREMKAKKDLFKSRLNKAQTTVEKEEMNIERRDKAIDDVLHSIGPPE 359
The following BLAST results are available for this feature:
BLAST of Gcaud3527.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IYI3_9FLOR2.030e-3035.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 102..143
NoneNo IPR availableCOILSCoilCoilcoord: 57..98
NoneNo IPR availableCOILSCoilCoilcoord: 151..185
NoneNo IPR availableCOILSCoilCoilcoord: 263..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..379
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..475
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 496..584
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 387..413

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_25_length_75543_cov_4.432116contigNODE_25_length_75543_cov_4.432116:61276..63030 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3527.t1Gcaud3527.t1Gracilaria caudata M_176_S67 malemRNANODE_25_length_75543_cov_4.432116 61276..63030 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3527.t1 ID=Gcaud3527.t1|Name=Gcaud3527.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=585bp
LAASKPAPLVNKRDTPAIFNGPEAVLAVLLAAAALLADFVRNVARLSAAG
AKQTLDLNAAESTVAELREALRISREVLDETQNRLTAVSDQRADAQLAVA
EADQMRQKMDSANQYAQSAQQQLQKLQRALSRVQQKRSDTAQEQERVDAE
RQRVETQIAEKRLLLDQLCEQIETARDTEMKLKQRLEHQQALLTKQMQQT
GNMPDTIAAGTEAEDATLRGGDASRSEMSLQEIKRNLNAERLALSADVRE
AQVASEAMTQEKVDELQLLKREMKAKRDGIRARLKKAQTTVDREENEIQR
REEAIDQILGSIETPDDEKVIMDGVKETEKKSTVKKRSRKPKQEVIDNDV
SAVDESEARSVKRKSGKKSPADDSTVEETLRTATEVGVDAGEDKTEALEE
ASTSEEKDVKASSTRVAGKGQRRKVGRSRKGAASASTAPKTRTRKSTRKK
RNEMDEDQPLTFQEASEVRQAMMDMLDTGIDPQVLQQEGYTFTEMELQQM
RSQLPGGAEIEGGEEMKDDRAADGDSASTMSSMRAKEEGAAGAASAENTE
SAANVEISHAGEKGELPRPKRKRSSRQSQSGPSS*
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