Gcaud3500.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3500.t1
Unique NameGcaud3500.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length268
Homology
BLAST of Gcaud3500.t1 vs. uniprot
Match: R7QL44_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL44_CHOCR)

HSP 1 Score: 224 bits (570), Expect = 1.360e-68
Identity = 117/268 (43.66%), Postives = 162/268 (60.45%), Query Frame = 0
Query:    1 MKLTDDHKRRFIQDGYLHLKHVVSPTHVASLLHVTDHFYDTHQYTLHDSNKDILPHFPEACEKHSVLTSLPRQTPILSLCEQLLGVGNVTLPGRTQIAYRPYDERLANRGLKLTDPMYSHWYHVDGGDGKYARTASPFTLLVGVCLSPGQTVDENRGQLNVWPTSHVTLHQVLKQRIQAGVIT--GRNLFGTPKEKPDIGPAKRVLMNVGDVVLAHHRLGHSGGINLSPHVRKNLYYRVTHRGHDQLLHAVWS-ASLWTEYDALHHLV 265
            M LT++ KR FI+DGYL L++V +       L V D       +T     +D LP      E+   +  +   T +   CE L+G G +      QIA RP +E+   +G+ +T+ M  H +H+DGG GKY +TASPFTLLVGV LS GQ ++ENRGQLNVWP SH  LH +L++R+Q  ++T  G+NLFG    KPDIG  KRVL+  GD  +AH RLGHSGG+NL    R  LY+RV+H+ HD  L  +   +S++ E++ +  LV
Sbjct:   60 MVLTEEQKRSFIRDGYLVLRNVATREMAKDALRVVDKARAKGAFT----EEDALPDVKREAERAPEIYRMMTDTILPEACEDLIGKGKIKYGKNAQIAIRPTEEKFKEKGMTMTENMPKHKWHIDGGKGKYRKTASPFTLLVGVALSEGQDIEENRGQLNVWPGSHFKLHPLLRERVQKDLVTDNGQNLFGYGPGKPDIGQPKRVLLRPGDACIAHQRLGHSGGVNLHADPRIQLYFRVSHKNHDDCLEQILEGSSVFLEFEGIKELV 323          
BLAST of Gcaud3500.t1 vs. uniprot
Match: A0A2V3II39_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II39_9FLOR)

HSP 1 Score: 140 bits (354), Expect = 8.490e-37
Identity = 89/247 (36.03%), Postives = 130/247 (52.63%), Query Frame = 0
Query:    3 LTDDHKRRFIQDGYLHLKHVVSPTHVASLLHVTDHFYDTHQYTLHDSNKDI--LPHFPEACEKHSVLTSLPRQTPILSLCEQLLGVGNVTLPGRT-QIAYRPYDERLANRGLKLTDPMYSHWYHVDGGDGKYARTASPFTLLVGVCLSPGQTVDENRGQLNVWPTSHVTLHQVLKQRIQAGVITGRNLFGTPKEKPDIGPAKRVLMNVGDVVLAHHRLGHSGGINLSPHVRKNLYYRVTHRGHDQLL 246
            LT+  K  FI+DGY+ L  +V      + L+  D  Y++ +Y L  +N +    P F  + +  + +T L  +T +  + E LLG  N  L     QIAY   DE     GL L D    + +H+D   G YA   + F L+ GV LS GQ VD+NRGQL VWP SH   H+++++ IQ        +      KPD+G  KRVL+  GD  + H RL H+ G+N    +RKN+Y+R++ + HD  L
Sbjct:    4 LTEVQKLEFIRDGYVVLPGIVPFDMAGAALYHCDIAYESKKYNLPQNNGNYRPTPSFWHSVKSANPVTDLFYKTDLYQVAEDLLGPSNTVLRKEEGQIAYTLPDEE---SGLGLDDDHPKNKWHIDTPQGPYANQGTSFILMFGVALSEGQIVDQNRGQLTVWPGSHFRTHKLMREIIQTHP-ADEVVRKFKSWKPDLGFPKRVLVMPGDGFIVHQRLAHAPGVNKFSKIRKNIYFRLSTKMHDATL 246          
BLAST of Gcaud3500.t1 vs. uniprot
Match: R7QKB4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKB4_CHOCR)

HSP 1 Score: 133 bits (334), Expect = 3.500e-34
Identity = 69/193 (35.75%), Postives = 105/193 (54.40%), Query Frame = 0
Query:   54 LPHFPEACEKHSVLTSLPRQTPILSLCEQLLGVGNVTL-PGRTQIAYRPYDERLANRGLKLTDPMYSHWYHVDGGDGKYARTASPFTLLVGVCLSPGQTVDENRGQLNVWPTSHVTLHQVLKQRIQAGVITGRNLFGTPKEKPDIGPAKRVLMNVGDVVLAHHRLGHSGGINLSPHVRKNLYYRVTHRGHDQL 245
            LP F +   ++  +  L  ++ ++   EQL+G G+VTL      +++    E  A  G+ LT+P  S  + +  G G Y  +      +VGV LS GQ VDENRGQ  VWP SHV +H VL Q ++        L     +K D+G  KR+L+  GD  +AH RL  + GINL   VRK++Y+++ H  +D++
Sbjct:   32 LPLFQKPIRRNQKVRDLFFKSGLVDASEQLIGEGHVTLRENMPDVSFNAQSELAAEEGMGLTEPFPSRKWQMQSGQGFYKGSGGDCNFMVGVALSDGQDVDENRGQFTVWPGSHVIIHPVLSQLVREDPPPDHLLKALRAKKIDVGSPKRILLKPGDAFIAHQRLASTQGINLLKKVRKSVYFKIAHTDYDEM 224          
BLAST of Gcaud3500.t1 vs. uniprot
Match: R7QI68_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI68_CHOCR)

HSP 1 Score: 124 bits (311), Expect = 2.430e-31
Identity = 69/165 (41.82%), Postives = 99/165 (60.00%), Query Frame = 0
Query:    1 MKLTDDHKRRFIQDGYLHLKHVVSPTHVASLLHVTDHFYDTHQYTLHDSNKDILPHFPEACEKHSVLTSLPRQTPILSLCEQLLGVGNVTLPGRT-QIAYRPYDERLANRGLKLTDPMYSHWYHVDGGDG-KYARTASPFTLLVGVCLSPGQTVDENRGQLNVWP 163
            M  T   +  F++DGY+ L++VV        L   D  + T++Y++ ++  D LP F +  +  SVLT L  +T IL   E L G GNV + G   QIA+RP ++R+  +G +    M S  +H+D G G KY +++S FT LVGV LSPGQ +DENRGQL+VWP
Sbjct:   30 MSFTRKDRDDFVRDGYVILQNVVPVQKARDALSYVDEAFATNRYSVRENKDDKLPAFWDKEQNSSVLTDLVLKTGILPALEHLYGTGNVAILGNAGQIAFRPRNDRMIAKGFQKAQLMGSTSWHIDDGPGGKYVKSSSCFTTLVGVPLSPGQEIDENRGQLHVWP 194          
BLAST of Gcaud3500.t1 vs. uniprot
Match: A0A2V3II10_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II10_9FLOR)

HSP 1 Score: 125 bits (313), Expect = 1.390e-30
Identity = 92/259 (35.52%), Postives = 128/259 (49.42%), Query Frame = 0
Query:   10 RFIQDGYLHLKHVVSPTHVASLLHVTDHFYDTHQYTLHDSNKDILPHFPEACEKHSVLTSLPRQTPILSLCEQLLGVGNVTLPGRTQIAYRPYDERLANRGLKLTDPMYSHWYHVD-GGDGKYARTASPFTLLVGVCLSPGQTVDENRGQLNVWPTSHVTLHQVLKQRIQAGV--ITGRNLFGTPKEKPDIGPAKRVLMNVGDVVLAHHRLGHSGGINLSPHVRKNLYYRVTHRGHDQL--LHAVWSAS--LWTEYDAL 261
            + +  GY  +K+V+    V   L           Y L + +   LP F +A ++   + +L   + +  L E +       L G  QIA RP DE L  RG+          +HVD GG GKY +  + F+LLVGV L+  +  D N GQLNVWP SHV LH+ L++ ++  V  IT    F   + +PDIG   RV +  GDVVLAH RLGH GG N+    R  +Y+RV   GH     +   W     +WT +D L
Sbjct:   38 QLLSQGYTVIKNVIPADVVKKALGHISSARKNENYVLRNGSG--LPSFYDAVQEADQIMNLMTTSSLQRLLESIYDSEIEILGGAGQIAIRPVDEDLVKRGVDKHKRANRTAWHVDEGGSGKYVQRPADFSLLVGVALTDSEG-DVNSGQLNVWPGSHVKLHEALQEHLRRDVEGITPNVRF--TEGRPDIGKPVRVCVLKGDVVLAHQRLGHCGGPNVVQE-RIMVYFRVRKSGHGNSNGVRERWMRGDGVWTGFDGL 290          
BLAST of Gcaud3500.t1 vs. uniprot
Match: A0A2D4BPK0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BPK0_PYTIN)

HSP 1 Score: 100 bits (248), Expect = 3.440e-20
Identity = 83/273 (30.40%), Postives = 124/273 (45.42%), Query Frame = 0
Query:    3 LTDDHKRRFIQDGYLHLKHVVSPTHVASLLHVTDHFYDTHQYTLHDSNKDILPHFPEACEKHSVLTSLPRQTPILSLCEQLLGVGNVTLPGRTQIAYRPYDERLANRGLKLTDPMYSHWYHVDGGDGKYARTASPFTLLVGVCLSPGQTVDENRGQLNVWPTSHVTLHQVLK----------QRIQAGVITGRNLFGTPKEKPDIGPAKRVLMNVGDVVLAHHRLGHSGGINLSPHVRKNLYYRVTHRGHDQL-LHAVWSASLWTEYDALHHL 264
            LTD  +  F++DGYL ++ VV    V + L   +H        + D   +              + +L   +      E L+G G V  P   QIA R + E    R     DP+ + W+     DG       PFTLL+GV LS     +   G   V+P SH +LH++L+          +  QA  I G          PD+G   ++L   GD+VLAH  L H GG+N SP +R  +Y+R+ H  H++L +HA  +  LW + + LHH+
Sbjct:  383 LTDSQRHAFMRDGYLQIRDVVPMKLVNAALRRINHELGIPGRMI-DGGVEGSGKLAGNVSNSDDILNLFFLSEAKQYAEALIGPGRVVPPRGAQIAMR-FPELGEPR-----DPVGTEWHT----DGMRQGKLHPFTLLLGVTLS--DVHEPLAGNFTVFPGSHRSLHKLLRDDGKLEGFDDECYQAASIWGDGTL------PDLGIPLQLLAKRGDIVLAHPNLAHRGGLNFSPDIRYQIYFRLKHERHEELQVHA--ATDLWCDLEGLHHV 634          
BLAST of Gcaud3500.t1 vs. uniprot
Match: A0A2D4BGD6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGD6_PYTIN)

HSP 1 Score: 98.2 bits (243), Expect = 4.920e-20
Identity = 82/273 (30.04%), Postives = 123/273 (45.05%), Query Frame = 0
Query:    3 LTDDHKRRFIQDGYLHLKHVVSPTHVASLLHVTDHFYDTHQYTLHDSNKDILPHFPEACEKHSVLTSLPRQTPILSLCEQLLGVGNVTLPGRTQIAYRPYDERLANRGLKLTDPMYSHWYHVDGGDGKYARTASPFTLLVGVCLSPGQTVDENRGQLNVWPTSHVTLHQVLK----------QRIQAGVITGRNLFGTPKEKPDIGPAKRVLMNVGDVVLAHHRLGHSGGINLSPHVRKNLYYRVTHRGHDQL-LHAVWSASLWTEYDALHHL 264
            LTD  +  F++DGYL ++ VV    V + L   +H        + D   +              + +L   +      E L+G G V  P   QIA R + E    R     DP+ + W+     DG       PFTLL+GV LS     +   G   V+P SH +LH++L+          +  QA  + G          PD+G   ++L   GD+VLAH  L H GG+N SP +R  +Y+R+ H  H +L +HA  +  LW + + LHH+
Sbjct:  120 LTDSQRHAFMRDGYLQIRDVVPMKLVNAALRRINHELGIPGRMI-DGGVEGSGKLAGNVSNSDDILNLFFLSEAKQYAEALIGPGRVVPPRGAQIAMR-FPELGEPR-----DPVGTEWHT----DGMRQGKLHPFTLLLGVTLS--DVHEPLAGNFTVFPGSHRSLHKLLRXDGKLEGXDDECYQAASVWGDGTL------PDLGIPLQLLAKRGDIVLAHPNLAHRGGLNFSPDIRYQIYFRLKHERHXELQVHA--ATXLWCDLEGLHHV 371          
BLAST of Gcaud3500.t1 vs. uniprot
Match: A0A225X5V4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X5V4_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.930e-17
Identity = 78/267 (29.21%), Postives = 123/267 (46.07%), Query Frame = 0
Query:    3 LTDDHKRRFIQDGYLHLKHVVSPTHVASLLHVTDHFYDTHQYTLHDSNKDILPHFPEACEKHSVLTSLPRQTPILSLCEQLLGVGNVTLPGRTQIAYRPYDERLANRGLKLTDPMYSHWYHVDGGDGKYARTASPFTLLVGVCLSPGQTVDENRGQLNVWPTSHVTLHQVLKQRIQAGVITGRN--------LFGTPKEKPDIGPAKRVLMNVGDVVLAHHRLGHSGGINLSPHVRKNLYYRVTHRGHDQLLHAVWSASLWTEYDAL 261
            L++  ++ FIQ+GYL ++  V  T   + L   +H        +    +  +          ++L +L   + +    E L+GVG V  P  +QIA R + E    R     +P+ + W+     DG       PFTLL G+ LS     +   G L V+P SHVTL   L +    G + G +        ++G     PD+G   ++L + GD+VLAH  L H GG+N SP +R  +Y+R+ H   D+L     +A LW +   L
Sbjct:  199 LSESQRQSFIQNGYLQIRGAVPLTLANAALRRINHDLGIPGNMIDGGVEGAIKLAGNTSNSDAIL-NLYHLSDVCKYVEALVGVGQVVPPQGSQIALR-FPELGEPR-----EPLGTEWHT----DGMRQGRLHPFTLLAGIALS--NVPEPLCGNLTVFPGSHVTLQSRLTRD---GKLHGHDDECYKADSVWGDGT-LPDLGTPVQLLASRGDLVLAHPNLAHRGGLNFSPDIRYQVYFRIKHHQLDELQEQC-AADLWADLQGL 447          
BLAST of Gcaud3500.t1 vs. uniprot
Match: A0A5D6Y211_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y211_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 8.340e-17
Identity = 79/270 (29.26%), Postives = 118/270 (43.70%), Query Frame = 0
Query:    3 LTDDHKRRFIQDGYLHLKHVVSPTHVASLLHVTDHFYDTHQYTLHDSNKDILPHFPEACEKHSVLTSLPRQTPILSLCEQLLGVGNVTLPGRTQIAYRPYDERLANRGLKLTDPMYSHWYHVDGGDGKYARTASPFTLLVGVCLSPGQTVDENRGQLNVWPTSHVTLHQVLKQRIQAGVITGR--NLFGTPK-----EKPDIGPAKRVLMNVGDVVLAHHRLGHSGGINLSPHVRKNLYYRVTHRGHDQLLHAVWSASLWTEYDALHHLV 265
            L++  +R F+Q+GYL ++  VS   V + L   +H        +    ++              + +L   +      E L+G G V  P   Q+A R + E    R     +P  + W+     DG       PF+LL+GV LS  +  +   G L V+P SH  LH +L      G + G     F T         PD+G   ++L + GD+VLAH  L H GG+N SP +R  +Y+R+ H  H  L      A LW + D L  LV
Sbjct:  176 LSESQRRSFMQNGYLQVRGAVSLALVDAALRRINHELGVPGRMVDGGVEEGSAKLAGNVSNSEEVLNLFHLSDARKYAEALVGAGKVRPPTGAQLALR-FPELGEPR-----EPRGTEWHT----DGMRQGKRHPFSLLLGVALSDVR--EPLAGNLTVFPESHARLHALLTAD---GRLEGYADECFRTDSVWGGGTLPDLGAPVQLLASRGDIVLAHPTLAHRGGLNFSPDIRYQVYFRLKHVDHAALA----PADLWADLDGLQELV 426          
BLAST of Gcaud3500.t1 vs. uniprot
Match: UPI001D0F72C9 (phytanoyl-CoA dioxygenase family protein n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D0F72C9)

HSP 1 Score: 87.0 bits (214), Expect = 1.090e-16
Identity = 89/272 (32.72%), Postives = 115/272 (42.28%), Query Frame = 0
Query:    1 MKLTDDHKRRFIQDGYLHLKHVVSPTHVASLLHVTDHFYDTHQYTLHDSNKDILPHF-PEA----CEKHSVLTSLPRQTPILSLCEQL---LGVGNVTLPGRTQIAYRPYDERLANRGLKLTDPMYSHWYHVDGG---DGKYARTASP--FTLLVGVCLSPGQTVDENRGQLNVWPTSHVTLHQVLKQRIQAGVITGRNLFGTP-KEKPDIGPAKRVLMNVGDVVLAHHRLGHSGGINLSPHVRKNLYYRVTHRGHDQLLHAVWSASLWTEY 258
            M+L DD  RRF  DG+L L  VV    +A+     D           D    +   F P A    CE       + R++P LSL EQL   LG+       +      PYD                   H+ GG   DG       P  FTLLVGV LS     + + G L VWP SH+   Q+ ++R    V+ G     T   + P +     VL   GD+VLAHH LGH+ G N +P  R+ LYYR+   GH     A +    WTEY
Sbjct:    1 MRLDDDDLRRFATDGHLLLPGVVDEALLAAADAEVDELVAGTPPMEGDGGPGVNAWFEPRARLPRCE------DVLRRSPALSLAEQLVDPLGLDFAFDHVQVSTTTAPYD-------------------HIPGGPHIDGHAPGQDPPASFTLLVGVLLSDQS--EPSTGNLWVWPGSHLDHQQLFRER-GTKVLQGSGGHSTLIPDPPVLARQVPVLGRRGDLVLAHHLLGHNKGGNTAPQQRRTLYYRLAATGHTDRWEATY-LDAWTEY 243          
The following BLAST results are available for this feature:
BLAST of Gcaud3500.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QL44_CHOCR1.360e-6843.66Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3II39_9FLOR8.490e-3736.03Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QKB4_CHOCR3.500e-3435.75Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QI68_CHOCR2.430e-3141.82Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3II10_9FLOR1.390e-3035.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2D4BPK0_PYTIN3.440e-2030.40Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A2D4BGD6_PYTIN4.920e-2030.04Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A225X5V4_9STRA1.930e-1729.21Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A5D6Y211_9STRA8.340e-1729.26Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
UPI001D0F72C91.090e-1632.72phytanoyl-CoA dioxygenase family protein n=1 Tax=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.620q2cbj1_9rhob like domaincoord: 2..261
e-value: 8.7E-20
score: 72.9
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 1..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_436_length_25374_cov_4.383380contigNODE_436_length_25374_cov_4.383380:23582..24622 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3500.t1Gcaud3500.t1Gracilaria caudata M_176_S67 malemRNANODE_436_length_25374_cov_4.383380 23582..24622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3500.t1 ID=Gcaud3500.t1|Name=Gcaud3500.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=268bp
MKLTDDHKRRFIQDGYLHLKHVVSPTHVASLLHVTDHFYDTHQYTLHDSN
KDILPHFPEACEKHSVLTSLPRQTPILSLCEQLLGVGNVTLPGRTQIAYR
PYDERLANRGLKLTDPMYSHWYHVDGGDGKYARTASPFTLLVGVCLSPGQ
TVDENRGQLNVWPTSHVTLHQVLKQRIQAGVITGRNLFGTPKEKPDIGPA
KRVLMNVGDVVLAHHRLGHSGGINLSPHVRKNLYYRVTHRGHDQLLHAVW
SASLWTEYDALHHLVQH*
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