Gcaud3383.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3383.t1
Unique NameGcaud3383.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length118
Homology
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BLAST of Gcaud3383.t1 vs. uniprot
Match: A0A2V3IX38_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX38_9FLOR)

HSP 1 Score: 63.2 bits (152), Expect = 6.360e-11
Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 0 
Query:    1 MLRRKPTFLEINQADIEELDQSRRQMREKLEQDGKGKDQQHPAVFEDHSVREKAVLGMSLRD 62
            MLRRKPT +E++QADI+ELDQ R Q REK EQ+ +GK  +   + E  S RE AV GMSLRD
Sbjct:    1 MLRRKPTLIEVDQADIDELDQLRNQAREKFEQETQGKGSRAETLTE-LSARENAVQGMSLRD 61
The following BLAST results are available for this feature:
BLAST of Gcaud3383.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IX38_9FLOR6.360e-1159.68Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 9..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..44
IPR018860Anaphase-promoting complex, subunit CDC26PFAMPF10471ANAPC_CDC26coord: 1..41
e-value: 5.3E-9
score: 36.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_100_length_51433_cov_4.606891contigNODE_100_length_51433_cov_4.606891:12449..13065 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3383.t1Gcaud3383.t1Gracilaria caudata M_176_S67 malemRNANODE_100_length_51433_cov_4.606891 12449..13065 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3383.t1 ID=Gcaud3383.t1|Name=Gcaud3383.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=118bp
MLRRKPTFLEINQADIEELDQSRRQMREKLEQDGKGKDQQHPAVFEDHSV
REKAVLGMSLRDVVMGSPHACDWSLWAINPRGSHNRFLHLSGLLIGHPIE
RTLILYITRVALPFPIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018860APC_suCDC26