Gcaud3326.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3326.t1
Unique NameGcaud3326.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length204
Homology
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BLAST of Gcaud3326.t1 vs. uniprot
Match: A0A2V3IME8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME8_9FLOR)

HSP 1 Score: 203 bits (516), Expect = 5.090e-63
Identity = 98/181 (54.14%), Postives = 128/181 (70.72%), Query Frame = 0 
Query:   28 ATKQYATFEWCEVRGDYGLCDFALEGVHAVYDHVAWGTGNYSLNGYVSGPFTPKIVKKNNDY-QTTLGYVKSVDALRDVFQCEI-----GAGGGKVCNFMTVPGQLFGTANIPGVRGTGITRMKGSVMGRYMPNGACVPMYLTEYEVLDTSVSPPRVKDVVKMPARRARIMNQCVLVYTEF 202
            A  Q  T+EWCEV+GD GLC FA + ++  +DHV WG+GN+SL G  SG FTP+IV K+ +Y  + +G VKSVD  RDVF CE      G+     C ++ +PG+LF    I G RG+GI+R +   + R++PNGACV MYLTEYE+LDTSVSPPRV++VV+MPAR+ARI N CVL Y +F
Sbjct:   27 AINQGVTYEWCEVKGDTGLCRFAFKDLYGTFDHVKWGSGNFSLKGSHSGSFTPRIVWKSPEYFDSEIGRVKSVDRKRDVFTCEPEYFNNGSYYEHRCTYLNIPGRLFNAVRIRGTRGSGISRSREHALRRHVPNGACVLMYLTEYEILDTSVSPPRVREVVRMPARQARIENNCVLFYAQF 207
[Close]
BLAST of Gcaud3326.t1 vs. uniprot
Match: A0A2V3IB93_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IB93_9FLOR)

HSP 1 Score: 109 bits (273), Expect = 4.890e-27
Identity = 53/112 (47.32%), Postives = 71/112 (63.39%), Query Frame = 0 
Query:   28 ATKQYATFEWCEVRGDYGLCDFALEGVHAVYDHVAWGTGNYSLNGYVSGPFTPKIVKKNNDY-QTTLGYVKSVDALRDVFQCEI-----GAGGGKVCNFMTVPGQLFGTANI 133
            A  Q  T+EWCEV+GD GLC FA + ++  +DHV WG+GN+SL G  SG FTP+IV K+ +Y  + +G VKSVD  RDVF CE      G+     C ++ +PG+LF    I
Sbjct:   27 AINQGVTYEWCEVKGDTGLCRFAFKDLYGTFDHVKWGSGNFSLKGSHSGSFTPRIVWKSPEYFDSEIGRVKSVDRKRDVFTCEPEYFNNGSYYEHRCTYLNIPGRLFNAVRI 138
The following BLAST results are available for this feature:
BLAST of Gcaud3326.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IME8_9FLOR5.090e-6354.14Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IB93_9FLOR4.890e-2747.32Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..203
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_135_length_45127_cov_4.991851contigNODE_135_length_45127_cov_4.991851:16897..17508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3326.t1Gcaud3326.t1Gracilaria caudata M_176_S67 malemRNANODE_135_length_45127_cov_4.991851 16897..17508 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3326.t1 ID=Gcaud3326.t1|Name=Gcaud3326.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=204bp
MKLVYSILPLLVLKLACPALVNAIPWSATKQYATFEWCEVRGDYGLCDFA
LEGVHAVYDHVAWGTGNYSLNGYVSGPFTPKIVKKNNDYQTTLGYVKSVD
ALRDVFQCEIGAGGGKVCNFMTVPGQLFGTANIPGVRGTGITRMKGSVMG
RYMPNGACVPMYLTEYEVLDTSVSPPRVKDVVKMPARRARIMNQCVLVYT
EFY*
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