Gcaud3317.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3317.t1
Unique NameGcaud3317.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length413
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud3317.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..121
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 60..70
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 90..100
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 122..350
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 351..367
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 368..412
NoneNo IPR availableTMHMMTMhelixcoord: 350..372
NoneNo IPR availableTMHMMTMhelixcoord: 66..88
NoneNo IPR availableTMHMMTMhelixcoord: 103..122
NoneNo IPR availableTMHMMTMhelixcoord: 37..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_375_length_27991_cov_4.438244contigNODE_375_length_27991_cov_4.438244:19483..20721 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3317.t1Gcaud3317.t1Gracilaria caudata M_176_S67 malemRNANODE_375_length_27991_cov_4.438244 19483..20721 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3317.t1 ID=Gcaud3317.t1|Name=Gcaud3317.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=413bp
MDIMEVNITQFLDIKNQPFRRVALDYSHLPYADVLDALAATIIVTALTAL
MMHLTTGIYGMSTRSISIKSLYGGSFLSDINHLLFMFLGKRNAKHKVQWT
PRIVAFILLLLLSLAEALLFLSQSTKTERYNLEDLHIRRSQLKPYVGKPF
LSTLSRSCTPMIQSQYPIWYSPLDLCVTHPYTERFVPRKQEVDRAMSISV
NVRYERGELSFIVITADYGYSLNINIVLHSAPRTIRMNVTNLITDPEELL
TFLTDGAAQLLGCPNASEVRVNPDFPDVFSRFLHNCREVDEESLLIGERL
VLSTLSLSEEFISATDFYSVEATNFTTKHTPITRASVDGYAVREVVRVRG
FILWIMATTLLMINFMLSCIAPDLEMAKSVAVASYLNWANIPFSGSQHVC
VPSPKAAEQNSC*
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