Gcaud3297.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3297.t1
Unique NameGcaud3297.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length151
Homology
BLAST of Gcaud3297.t1 vs. uniprot
Match: A0A2V3IFT2_9FLOR (Ubiquitin domain-containing protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFT2_9FLOR)

HSP 1 Score: 245 bits (625), Expect = 2.650e-81
Identity = 115/150 (76.67%), Postives = 135/150 (90.00%), Query Frame = 0
Query:    1 MGCASSKEGQQAGDAELPQWDGHIRSPKAWRLEPAISSQHLSRLRNEFWETRVEGRSEMWQALRFAAESESDELRDETVKAAGLRPANRRCTMQSMFDELGALYEIPMYALIDPTNLDEQPVHEEFKDAAKAVTDYVNAHEKARRTPRAL 150
            MGCASSK+ +++ + E PQWDGHIR  +AW+LE  IS++HL+RLRNEFWETRVEGR EMWQALRFAAES+SDELRDET+KAAG+RPANRR TMQ+MFDE GALY IPMYAL+DPTNLDEQP +EEFKDAA+AV DYV AH+K+RRTPR+L
Sbjct:    1 MGCASSKQSRRSSERESPQWDGHIRPVRAWKLERPISTEHLARLRNEFWETRVEGRPEMWQALRFAAESQSDELRDETLKAAGMRPANRRYTMQTMFDERGALYAIPMYALVDPTNLDEQPSYEEFKDAARAVADYVEAHDKSRRTPRSL 150          
BLAST of Gcaud3297.t1 vs. uniprot
Match: A0A5J4Z2P8_PORPP (Ubiquitin domain-containing protein 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2P8_PORPP)

HSP 1 Score: 164 bits (416), Expect = 2.160e-49
Identity = 83/153 (54.25%), Postives = 103/153 (67.32%), Query Frame = 0
Query:    2 GCASS----------KEGQQAGDAELPQWDGHIRSPKAWRLEPAISSQHLSRLRNEFWETRVEGRSEMWQALRFAAESESDELRDETVKAAGLRPANRRCTMQSMFDELGALYEIPMYALIDPTNLDEQPVHEEFKDAAKAVTDYVNAHEKAR 144
            GCASS            G     A +  WDGH+RS   WR+EPA++   L RLRNEFWETRVEGR EMWQALR AAE+++D+LRDE VKAAG+RPA    T+   +DE GALYE+P+Y L DP NLD +P   EFKDAA+AV +Y    +++R
Sbjct:    3 GCASSLNAESGKGKRNSGAAGRVAGVGAWDGHVRSVAPWRVEPAVTRAQLERLRNEFWETRVEGREEMWQALRAAAEADTDDLRDEIVKAAGIRPAAANATLLVAYDERGALYEVPIYCLRDPDNLDGEPACPEFKDAARAVQEYCERMKQSR 155          
BLAST of Gcaud3297.t1 vs. uniprot
Match: A0A7S1XEH7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEH7_9RHOD)

HSP 1 Score: 157 bits (397), Expect = 1.300e-46
Identity = 78/139 (56.12%), Postives = 98/139 (70.50%), Query Frame = 0
Query:    1 MGCASSKEGQQAGDAELP---QWDGHIRSPKAWRLEPAISSQHLSRLRNEFWETRVEGRSEMWQALRFAAESESDELRDETVKAAGLRPANRRCTMQSMFDELGALYEIPMYALIDPTNLDEQPVHEEFKDAAKAVTDY 136
            MGC  S+     G        QWDG +R    W+LE A++ +HL RLR EFWETRVEG+ EMWQALR AAE+  D LRDE ++A+GLRPA+RR T+ +M+DELGALY +P+Y + DP+NL E+P  EEFKDAA AV  Y
Sbjct:    1 MGCVGSRARDDDGGGTHAYDFQWDGRVRDVGDWKLELALTPEHLQRLRAEFWETRVEGKPEMWQALRAAAEALDDTLRDEIIRASGLRPASRRGTLLAMYDELGALYLVPIYCVRDPSNLGEKPAFEEFKDAAHAVKVY 139          
BLAST of Gcaud3297.t1 vs. uniprot
Match: A0A7S2ZBU4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZBU4_9RHOD)

HSP 1 Score: 149 bits (376), Expect = 1.940e-43
Identity = 75/141 (53.19%), Postives = 99/141 (70.21%), Query Frame = 0
Query:    1 MGCASSKE-GQQAGDAELPQWDGHIRSPKAWRLEPAISSQHLSRLRNEFWETRVEGRSEMWQALRFAAESESDELRDETVKAAGLRPANRRCTMQSMFDELGALYEIPMYALIDPTNLDEQPVHEEFKDAAKAVTDYVNAH 140
            MGC SSKE G +A  AE   WDG +++PK W LE AI ++HL R+R EFWETRVEGR EMW AL  AAE++SDELR + V AAG++PA +R T++ ++DE GA+YE+P+Y L  P N+D +   EE KDA   +  Y  +H
Sbjct:    1 MGCGSSKEDGGRA--AEALSWDGVVKNPKTWELERAIQTEHLQRMRAEFWETRVEGREEMWVALMAAAEADSDELRFQIVDAAGIQPALKRKTLELVYDERGAIYEVPIYCLSAPANIDGEDACEEMKDARFYLQGYYESH 139          
BLAST of Gcaud3297.t1 vs. uniprot
Match: M2WA60_GALSU (F6I1.3 protein n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WA60_GALSU)

HSP 1 Score: 121 bits (303), Expect = 3.460e-32
Identity = 56/101 (55.45%), Postives = 72/101 (71.29%), Query Frame = 0
Query:   20 WDGHIRSPKAWRLEPA---ISSQHLSRLRNEFWETRVEGRSEMWQALRFAAESESDELRDETVKAAGLRPANRRCTMQSMFDELGALYEIPMYALIDPTNL 117
            W+G ++ PK W+ EP    ++   L R+R EFW+TR EGR EMWQAL+ AAE+  D LR+E VKAAGL PANR  T++S +DELG  YE+P+Y L DP NL
Sbjct:   41 WNGIVQLPKPWKAEPPFGPLTETELKRMREEFWDTRTEGRQEMWQALKAAAETTEDTLRNEIVKAAGLTPANREATLESCYDELGNYYEVPVYCLRDPDNL 141          
BLAST of Gcaud3297.t1 vs. uniprot
Match: A0A2U1QJT6_ARTAN (Ubiquitin domain-containing protein 1 n=2 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1QJT6_ARTAN)

HSP 1 Score: 72.8 bits (177), Expect = 9.490e-14
Identity = 48/121 (39.67%), Postives = 65/121 (53.72%), Query Frame = 0
Query:    1 MGCASSKEGQQAGDAELPQWDGHIRSPKAWRLEPAISSQHLSRLRNEFWETRVE--GRSEMWQALRFAAESESDELRDETVKAAGLRPANRRCTMQSMFDE--LGALYEIPMYALIDPTNL 117
            MGCA  K    + D         IR P+ W    AI+   L+ LR EFW+T     G+ E+W AL+ AAESE  +L    V +AG+   N   T+   +DE   GA+YE+P+Y L +PTNL
Sbjct:    1 MGCACVKPSTTSDDRPRTT---RIRKPEPWSHTEAITRVQLNALREEFWDTAPHYGGKQEIWDALKAAAESEI-QLAQAIVSSAGIIVQNPDLTL--CYDERVTGAMYELPLYVLSEPTNL 115          
BLAST of Gcaud3297.t1 vs. uniprot
Match: UPI0018F85170 (ubiquitin domain-containing protein 2-like n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F85170)

HSP 1 Score: 72.0 bits (175), Expect = 1.550e-13
Identity = 44/110 (40.00%), Postives = 63/110 (57.27%), Query Frame = 0
Query:   13 GDAELPQWDGH---IRSPKAWRLEPAISSQHLSRLRNEFWETRVE--GRSEMWQALRFAAESESDELRDETVKAAGLRPANRRCTMQSMFDELGALYEIPMYALIDPTNL 117
            G + L   DG    I+ PK W+    I+   L ++R+EFW+T     GR+E+W ALR AAE++ D L    V +AG+   +   T+   +DE GA YE+P Y L +PTNL
Sbjct:    4 GGSSLADGDGSPKKIQKPKPWKHPQPITRTQLMKMRDEFWDTAPHYGGRTEIWDALRAAAEADLD-LAQAIVDSAGVIVRSDDLTL--CYDERGAKYELPKYVLSEPTNL 110          
BLAST of Gcaud3297.t1 vs. uniprot
Match: A0A118JT92_CYNCS (UBD domain-containing protein n=2 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A118JT92_CYNCS)

HSP 1 Score: 69.3 bits (168), Expect = 3.740e-12
Identity = 44/125 (35.20%), Postives = 64/125 (51.20%), Query Frame = 0
Query:    1 MGCASSKE---GQQAGDAELPQWD--GHIRSPKAWRLEPAISSQHLSRLRNEFWETRVE--GRSEMWQALRFAAESESDELRDETVKAAGLRPANRRCTMQSMFDELGALYEIPMYALIDPTNLD 118
            MGC  S      Q+     +P  +    +R P+ WR    I+ + L+ +RN FW       GR E+W ALR AAES+    +   +   G+R  N   T+   +DE GA YE+P+Y L +PTNL+
Sbjct:    1 MGCVKSSNVVNDQETACFRVPAHNRPNRLRKPRPWRHNRPITGEQLTNMRNMFWHNAPHFGGRQEIWSALRAAAESDLPYAQ-AIIDNNGIRVENPYMTV--CYDEGGARYELPLYVLAEPTNLE 122          
BLAST of Gcaud3297.t1 vs. uniprot
Match: A0A168KZ81_ABSGL (Ubiquitin-like domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168KZ81_ABSGL)

HSP 1 Score: 72.0 bits (175), Expect = 4.260e-12
Identity = 50/154 (32.47%), Postives = 71/154 (46.10%), Query Frame = 0
Query:    1 MGCASSKEGQQAGDAELPQWDGHIRSPKAWRLEPAISSQHLSRLRNEFWETR--VEGRSEMWQALRFAAESESDELRDETVKAAGLRPANRRCTMQSMFDELGALYEIPMYALIDPTN--LDEQ------------PVHEEFKDAAKAVTDYVN 138
            MGC  S E  Q     +       RS   W  E  I+   L   R+ FWET    EGR E+WQA++ A  SE   L    + AA ++          ++DELG  YEIP+Y ++DPTN  LDE             P H +  ++ +++T Y +
Sbjct:    1 MGCCMSSESNQG--RSVTGGKPFKRSNIQWTSEVPITRSRLEEKRSTFWETAPFYEGRPEIWQAIQAAITSEDIILAQSILDAANIKLPTGNPN-DGVYDELGNRYEIPLYCIVDPTNVILDEAEDDEIDLGQRSPPQHRQHNESVQSITTYTH 151          
BLAST of Gcaud3297.t1 vs. uniprot
Match: A0A0V0R5Y3_PSEPJ (Ubiquitin-like domain-containing protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0R5Y3_PSEPJ)

HSP 1 Score: 70.1 bits (170), Expect = 1.080e-11
Identity = 35/89 (39.33%), Postives = 58/89 (65.17%), Query Frame = 0
Query:   36 ISSQHLSRLRNEFWETRVEGRSEMWQALRFAAESESDELRDETVKAAGLRPANRRCTMQSMFDELGALYEIPMYALIDPTNLDEQPVHE 124
            ++ + L R R EFWETRVEG+ + WQAL+ A ES+ ++L    + AAG++  NR  ++Q  +D+ G  Y+IP++ + DP + + +P  E
Sbjct:   70 VTKEQLERKRQEFWETRVEGKQQTWQALKSAVESD-EKLAIGLLAAAGIKLVNR--SIQISYDDTGHKYDIPVFCINDPYSCEAEPPTE 155          
The following BLAST results are available for this feature:
BLAST of Gcaud3297.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFT2_9FLOR2.650e-8176.67Ubiquitin domain-containing protein 1 n=1 Tax=Grac... [more]
A0A5J4Z2P8_PORPP2.160e-4954.25Ubiquitin domain-containing protein 2 n=1 Tax=Porp... [more]
A0A7S1XEH7_9RHOD1.300e-4656.12Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S2ZBU4_9RHOD1.940e-4353.19Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2WA60_GALSU3.460e-3255.45F6I1.3 protein n=2 Tax=Galdieria sulphuraria TaxID... [more]
A0A2U1QJT6_ARTAN9.490e-1439.67Ubiquitin domain-containing protein 1 n=2 Tax=Arte... [more]
UPI0018F851701.550e-1340.00ubiquitin domain-containing protein 2-like n=1 Tax... [more]
A0A118JT92_CYNCS3.740e-1235.20UBD domain-containing protein n=2 Tax=Cynara cardu... [more]
A0A168KZ81_ABSGL4.260e-1232.47Ubiquitin-like domain-containing protein n=1 Tax=A... [more]
A0A0V0R5Y3_PSEPJ1.080e-1139.33Ubiquitin-like domain-containing protein n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032752DC-UbP/UBTD2, N-terminal domainPFAMPF16455UBDcoord: 23..119
e-value: 1.3E-19
score: 70.3
IPR038169DC-UbP/UBTD2, N-terminal domain superfamilyGENE3D1.20.225.20coord: 37..111
e-value: 1.2E-16
score: 62.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
IPR039869Ubiquitin domain-containing protein 1/2PANTHERPTHR13609UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATEDcoord: 1..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_84_length_54915_cov_4.457829contigNODE_84_length_54915_cov_4.457829:44150..44694 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3297.t1Gcaud3297.t1Gracilaria caudata M_176_S67 malemRNANODE_84_length_54915_cov_4.457829 44150..44694 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3297.t1 ID=Gcaud3297.t1|Name=Gcaud3297.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=151bp
MGCASSKEGQQAGDAELPQWDGHIRSPKAWRLEPAISSQHLSRLRNEFWE
TRVEGRSEMWQALRFAAESESDELRDETVKAAGLRPANRRCTMQSMFDEL
GALYEIPMYALIDPTNLDEQPVHEEFKDAAKAVTDYVNAHEKARRTPRAL
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032752DC-UbP/UBTD2_N
IPR038169DC-UbP/UBTD2_N_sf
IPR039869UBTD1/2