Gcaud3275.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3275.t1
Unique NameGcaud3275.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length785
Homology
BLAST of Gcaud3275.t1 vs. uniprot
Match: A0A2V3J4U4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4U4_9FLOR)

HSP 1 Score: 463 bits (1191), Expect = 2.090e-146
Identity = 286/659 (43.40%), Postives = 401/659 (60.85%), Query Frame = 0
Query:  139 SPNIEDVEETENQSNHLTIGGTITVSDFSRGPLLNRTGERIKDTPFSDVLILLSMNGSRRSTVPTIARQESLNVSQSVVTVRACLERLVGNGESTPLLSLHAFERPSLKETDIIVSRGFKSSFQLNETYTCLMGLALEIPADTLSAMFLVLSARLSSGSAVVKISAAQSTNLVAASPLVWNRNLLSTSEKANASLGNAEKAKVFIISSWPNLKHVELEDSQVDSTGLHYIYGSISRFPNPICDDSGTQLIASIVGKQLGIGPNQVTIIPIPVRNCEEPYSLSVILNALKHVTSSVG--------SSSSSNSFLIFDDQLQESGFLNDSSLLKEFEVLADAGVVTLVPGKACHELQPSYVAVGAFGHHVQDGGNSSS-AEQFVIRSSKCSSMFDVFGPGDFSTAASIRGPESYTNLNWGSNVAAGGVLGVFLMMSLEQNLNPNITEVKALLKGLTRTSPVIGDLNTSEFNGSGPALPLLGAATSLSDLRKSFRELASSNSEGKHFLVTFLSKLPIGAIIGICLVVCLXXXXXXXGAVFVSRRRRESDDYEGEPTLEE-DIESAAVTDNSVSETHSDRALKRPPTI--VDILSPTPLRVPPQRQDTDKGRPPQPQPVRVPVVQRLLSLNRSKESPIPKGDKASWFATPRS-EKPGNGTFNR 784
            S + +D     N    L +   +T+S  ++G L+ R    + ++ +S+ LI+LSM  +R      +A + SLNVS S+VT+ AC+ +     +   LLSL+AF R +    D+I SRG   S   +E   C   + L+IP      ++LVLS     G+  V++S ++STN  A SP++WNR+LLS  EK N +L  AEK+K+F+ISSWPNL+HVEL  + +D++GL  IYGS SR P  ICDD GTQL+ S+VG ++GIGP    I+PIPVR+CE  YS SVIL+AL+ V ++V         SSS  N+F++FD+ LQE+G +ND  LLKE E+L++ GVV +VPGK C+  +PSYVAV AFG  V D       ++++VI SS+C  +FDVFGPGD+ST+    GPESY  +  G NVAAGG++ VFL +S   N+  NIT+VK +L  +   SP+IG+++ +EF G    LPLLGA +SLSDLRKSF + +S +S+        +SKL    I+GI L +  XXXXXXX                   ++ E DIE+A++T +S +        K+       ++ SP PLR                  +R+PVVQRLLS+NRSKESPI +GDKASWFATP++ +  GN TF R
Sbjct:  311 SSDSQDTLPPINLQRKLGVDENLTISIGTQGQLIKRGSSEVSNSRYSEELIVLSMKSNRILERTEVAGRNSLNVSSSIVTINACIMQ---REQDPSLLSLYAFRRQTFLGDDLIASRGAMGSAMDDEDQDCFRSVRLDIPDSYPDVIYLVLSRNKRFGAVNVRLSTSRSTNAEAVSPMLWNRDLLSLPEKDNNTLNLAEKSKIFVISSWPNLEHVELLGATIDTSGLQQIYGSPSRLPRSICDDLGTQLVTSVVGSRIGIGPRSTVIVPIPVRDCERSYSRSVILSALRFVRTTVDVSARAKDDSSSHPNTFVLFDEYLQETGLVNDVVLLKELELLSNLGVVNVVPGKTCNVKRPSYVAVRAFGRRVSDNTQRVELSDKYVIDSSQCLDLFDVFGPGDYSTSVYTAGPESYRTIMQGCNVAAGGIVSVFLFLSSSLNVPLNITKVKDILDEMGEVSPLIGNISLNEFQGIARELPLLGAGSSLSDLRKSFTKRSSESSKESIGFFRTISKLSTAVIVGISLTIGXXXXXXXXXXXXXXXXXXXXXXXXXXXSVYEVDIETASLTHDSTTAKQDTNRNKKDSAARESEVASPIPLRKR-XXXXXXXXXXXXXXXIRMPVVQRLLSMNRSKESPITRGDKASWFATPKAPDGAGNRTFKR 965          
The following BLAST results are available for this feature:
BLAST of Gcaud3275.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J4U4_9FLOR2.090e-14643.40Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 677..784
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..72
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..640
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 668..784
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 641..667
NoneNo IPR availableTMHMMTMhelixcoord: 645..667

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_327_length_29891_cov_4.655638contigNODE_327_length_29891_cov_4.655638:22720..25074 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3275.t1Gcaud3275.t1Gracilaria caudata M_176_S67 malemRNANODE_327_length_29891_cov_4.655638 22720..25074 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3275.t1 ID=Gcaud3275.t1|Name=Gcaud3275.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=785bp
MEATTPVISSTPVSSAKPSSTVSMSSASDGILIHPDQSSSQHESNATSPT
SSGAASLLPSLSFSSSPSPSRSVDAVAPIASTAPQQTSSSSPSHSAEVRV
SAPPSITEPASLPISVSSLPSPPASTPKPRESSAAPEVSPNIEDVEETEN
QSNHLTIGGTITVSDFSRGPLLNRTGERIKDTPFSDVLILLSMNGSRRST
VPTIARQESLNVSQSVVTVRACLERLVGNGESTPLLSLHAFERPSLKETD
IIVSRGFKSSFQLNETYTCLMGLALEIPADTLSAMFLVLSARLSSGSAVV
KISAAQSTNLVAASPLVWNRNLLSTSEKANASLGNAEKAKVFIISSWPNL
KHVELEDSQVDSTGLHYIYGSISRFPNPICDDSGTQLIASIVGKQLGIGP
NQVTIIPIPVRNCEEPYSLSVILNALKHVTSSVGSSSSSNSFLIFDDQLQ
ESGFLNDSSLLKEFEVLADAGVVTLVPGKACHELQPSYVAVGAFGHHVQD
GGNSSSAEQFVIRSSKCSSMFDVFGPGDFSTAASIRGPESYTNLNWGSNV
AAGGVLGVFLMMSLEQNLNPNITEVKALLKGLTRTSPVIGDLNTSEFNGS
GPALPLLGAATSLSDLRKSFRELASSNSEGKHFLVTFLSKLPIGAIIGIC
LVVCLLLIVIIVGAVFVSRRRRESDDYEGEPTLEEDIESAAVTDNSVSET
HSDRALKRPPTIVDILSPTPLRVPPQRQDTDKGRPPQPQPVRVPVVQRLL
SLNRSKESPIPKGDKASWFATPRSEKPGNGTFNR*
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