Gcaud3261.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3261.t1
Unique NameGcaud3261.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length507
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud3261.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 471..506
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 449..470
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..448
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availableTMHMMTMhelixcoord: 449..471

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_138_length_44555_cov_4.790842contigNODE_138_length_44555_cov_4.790842:40436..41956 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3261.t1Gcaud3261.t1Gracilaria caudata M_176_S67 malemRNANODE_138_length_44555_cov_4.790842 40436..41956 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3261.t1 ID=Gcaud3261.t1|Name=Gcaud3261.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=507bp
MSLFKHPALLGILILFNMITAHSPATVPGIIVNSFLPRGFNGTVYSLAAD
INHDVYASCFDPTDDNGSSAFILKLDAVLHTVWTKKLETFPATPATIAFS
ATMGLYAVVSMKNSETNTIEIWVFEIDADDGKTLQAVQVDSVESIVEVGL
QAFVATSERERPTLYVSYVMPRISQRDTVTKVLQLKKMDSGVLFEQWRTE
IYNASRAVVSHAIEEYIPGQGVYVAQITRKSAASITDMATITMIDKNGST
MLSGSFPTMTENAKISCFESDDNGLMFFSESPSHLHHLAMTSLNKSHRIT
KLWSESSIDIAAMHVLRNGSLLYVLADAKAIRNNTSSADSEIVPVFVVYN
NSGAILLTERHDELNSGVERILRTFAMRNEALGPAIVLGGHFSLARSDGR
LGPSQISLSTYIFPISAFETQEALDTSPVPQVPSLGEESTEGQSRYRRFA
IGISCGICAAVVVVGIMSCLRRRRATLVSKLSRNARHADQHVSNAVTGIF
RIPGSN*
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