Gcaud3250.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3250.t1
Unique NameGcaud3250.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length191
Homology
BLAST of Gcaud3250.t1 vs. uniprot
Match: R7QIM3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIM3_CHOCR)

HSP 1 Score: 207 bits (527), Expect = 1.330e-62
Identity = 98/185 (52.97%), Postives = 129/185 (69.73%), Query Frame = 0
Query:    1 MAEGSYPPSVEYAIAGQTRNIPYWLADGIYPKYPYFVQTVSHPLTKKEKVMAAHQEARRKDVERAFGVLQARWHIIARPSRFWNKTTMRIVMQCCILLHNMMIESNRN--EEEPEDVHELVANASFGNDATVMW---ELAASQEEVIPPPGTIAAICALQRLSNDEREYLKTRRLVMQNLWDTFG 180
            +A G YPP +EY IAG+ RNIPYWLADG+YP++P  VQTV  P T KEK M+ +QE  RKDVERAFGVLQA+WHIIAR SRFW+K  M+ V++CCI+LHNMM+E+ +N   ++ +   EL  +A  GN A  MW   + + +Q   +PPPG++AA+    RL     EY  T+RL+M +LWD  G
Sbjct:  200 IATGEYPPPIEYTIAGKRRNIPYWLADGVYPRWPSSVQTVLEPRTSKEKCMSRNQEHARKDVERAFGVLQAKWHIIARLSRFWSKQIMKEVIECCIILHNMMVENRKNCDSDDAQSDDELQCDAVVGNSAKPMWSCLQRSGAQNTTVPPPGSLAALFETNRLLKHREEYFTTQRLIMDHLWDFEG 384          
BLAST of Gcaud3250.t1 vs. uniprot
Match: R7QSZ8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSZ8_CHOCR)

HSP 1 Score: 187 bits (476), Expect = 1.920e-55
Identity = 86/177 (48.59%), Postives = 118/177 (66.67%), Query Frame = 0
Query:    1 MAEGSYPPSVEYAIAGQTRNIPYWLADGIYPKYPYFVQTVSHPLTKKEKVMAAHQEARRKDVERAFGVLQARWHIIARPSRFWNKTTMRIVMQCCILLHNMMIESNRNEEEPEDVHELVANASFGNDATVMW-ELAASQEEVIPPPGTIAAICALQRLSNDEREYLKTRRLVMQNLW 176
            +A G+YPP VEY+I G  RN+PYWLADGIYPK+P FV TV+ PLT+KEK M  HQEA RKDVER FGVL+++W+II+RP RFW  + M  VM CCI+LHNM  E  +++ +P    +  +    GNDAT +W E   +      P G+ +A+ A    + D + Y++TR L++ + W
Sbjct:  168 IANGNYPPPVEYSIMGVKRNVPYWLADGIYPKWPVFVHTVAEPLTEKEKCMTRHQEAARKDVEREFGVLKSKWNIISRPGRFWGTSFMHDVMNCCIILHNMCAEDRQDDNDPHFREQPFSRVVIGNDATPLWGEQGNTVGPATAPVGSFSALYATSAKTKDHQGYMRTRALIIDHRW 344          
BLAST of Gcaud3250.t1 vs. uniprot
Match: R7QCH5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCH5_CHOCR)

HSP 1 Score: 175 bits (443), Expect = 4.540e-51
Identity = 90/185 (48.65%), Postives = 119/185 (64.32%), Query Frame = 0
Query:    1 MAEGSYPPSVEYAIAGQTRNIPYWLADGIYPKYPYFVQTVSHPLTKKEKVMAAHQEARRKDVERAFGVLQARWHIIARPSRFWNKTTMRIVMQCCILLHNMMIESNRNEEEPEDVHELVANASF--GNDATV-MWELAASQEEVIPP-PGTIAAICALQRLSNDEREYLKTRRLVMQNLWDTFGN 181
            +A G+YPP ++Y I GQ RNIPYWL DGIYPK+P FV +++ P T KEK+ +  QE+ RKDVERAFGVLQA+WH+IARP RFWN   M  VM+ CI+LHNM +E          VH    N +F  G D  + MW  ++    V    P +I A+CA    +++  EYL T++LVM +LWD  G+
Sbjct:  112 IASGTYPPPLQYIINGQERNIPYWLVDGIYPKWPCFVHSIAEPGTPKEKLFSNRQESERKDVERAFGVLQAKWHVIARPGRFWNIDFMHKVMKSCIILHNMCVEDRV-------VHCDTDNDAFDLGGDINLPMWGSSSDSTVVTAAAPDSIEALCAASAFTSNAVEYLNTKKLVMDHLWDHAGS 289          
BLAST of Gcaud3250.t1 vs. uniprot
Match: R7QB99_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB99_CHOCR)

HSP 1 Score: 175 bits (443), Expect = 3.300e-50
Identity = 90/185 (48.65%), Postives = 119/185 (64.32%), Query Frame = 0
Query:    1 MAEGSYPPSVEYAIAGQTRNIPYWLADGIYPKYPYFVQTVSHPLTKKEKVMAAHQEARRKDVERAFGVLQARWHIIARPSRFWNKTTMRIVMQCCILLHNMMIESNRNEEEPEDVHELVANASF--GNDATV-MWELAASQEEVIPP-PGTIAAICALQRLSNDEREYLKTRRLVMQNLWDTFGN 181
            +A G+YPP ++Y I GQ RNIPYWL DGIYPK+P FV +++ P T KEK+ +  QE+ RKDVERAFGVLQA+WH+IARP RFWN   M  VM+ CI+LHNM +E          VH    N +F  G D  + MW  ++    V    P +I A+CA    +++  EYL T++LVM +LWD  G+
Sbjct:  189 IASGTYPPPLQYIINGQERNIPYWLVDGIYPKWPCFVHSIAEPGTPKEKLFSNRQESERKDVERAFGVLQAKWHVIARPGRFWNIDFMHKVMKSCIILHNMCVEDRV-------VHCDTDNDAFDLGGDLNLPMWGSSSDSTVVTAAAPDSIEALCAASAFTSNAVEYLNTKKLVMDHLWDHAGS 366          
BLAST of Gcaud3250.t1 vs. uniprot
Match: R7QEW9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEW9_CHOCR)

HSP 1 Score: 154 bits (388), Expect = 1.910e-43
Identity = 69/104 (66.35%), Postives = 82/104 (78.85%), Query Frame = 0
Query:    1 MAEGSYPPSVEYAIAGQTRNIPYWLADGIYPKYPYFVQTVSHPLTKKEKVMAAHQEARRKDVERAFGVLQARWHIIARPSRFWNKTTMRIVMQCCILLHNMMIE 104
            +A GSYPP VEY +    RNIPYWL DGIYPK+P FV T+S PLT+KEK M  +QEA RKDVERAFGVLQ++W+IIARP RFW+   +  VMQCCI+LHNM +E
Sbjct:  134 IANGSYPPPVEYNLMENVRNIPYWLVDGIYPKWPVFVHTLSEPLTEKEKCMTRNQEAARKDVERAFGVLQSKWNIIARPGRFWSTDFLHDVMQCCIILHNMCVE 237          
BLAST of Gcaud3250.t1 vs. uniprot
Match: R7QEL5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEL5_CHOCR)

HSP 1 Score: 131 bits (329), Expect = 5.910e-34
Identity = 73/181 (40.33%), Postives = 106/181 (58.56%), Query Frame = 0
Query:    4 GSYPPSVEYAIAGQTRNIPYWLADGIYPKYPYFVQTVSHPLTKKEKVMAAHQEARRKDVERAFGVLQARWHIIARPSRFWNKTTMRIVMQCCILLHNMMIESNRNEEEPEDVHELVANASFGNDA--TVMW-ELAASQEEVIPPPGTIAAICALQRLSNDEREYLKTRRLVMQNLWDTFGN 181
            G +PPS+ Y + G  R I Y+LADGIYP +  FV+T+S  +TKKE   AA QEA  KD+ERAFGVL AR+HI+ RPSR W +  +  VM+ CI++HNM++E  R+  E E  H   A   F N A  T  W  +  S+EE               R++N + ++   +  +++++W+  GN
Sbjct:  137 GEFPPSLPYWVNGNERKILYYLADGIYPNWAIFVKTISEGVTKKETTYAAAQEAMHKDIERAFGVLTARFHILKRPSRLWYQEDIARVMKACIIIHNMIVEYRRDTYEIE-WHSRSAAGIFANGAVPTETWASMVGSREE---------------RITNSD-DHFSLKNDLIEHIWEMHGN 300          
BLAST of Gcaud3250.t1 vs. uniprot
Match: A0A336MR40_CULSO (CSON005106 protein n=1 Tax=Culicoides sonorensis TaxID=179676 RepID=A0A336MR40_CULSO)

HSP 1 Score: 133 bits (334), Expect = 1.060e-33
Identity = 68/175 (38.86%), Postives = 99/175 (56.57%), Query Frame = 0
Query:    8 PSVEYAIAGQTRNIPYWLADGIYPKYPYFVQTVSHPLTKKEKVMAAHQEARRKDVERAFGVLQARWHIIARPSRFWNKTTMRIVMQCCILLHNMMIESNRNEEEPEDVHELVANASFGNDATVMWELAASQEEVIPPPGTIAAICALQRLSNDEREYLKTRRLVMQNLWDTFGNT 182
            P ++Y+I G  R   YWLADGIYP +P FV+T+S P  +K  + +  QE+ RKDVERAFGVLQ++WHI+  P R W+ ++M +VM+ CI+LHNM IE   NE +  +      N    N          +QE   PP  ++A     ++      EY   R  ++ +LW+  GN+
Sbjct:  256 PKIKYSINGTQRETGYWLADGIYPDWPIFVKTISEPSNRKAALFSKKQESLRKDVERAFGVLQSQWHILKNPGRLWDVSSMSLVMKTCIILHNMRIEY-ANESKTTNQDRFYENHENSNP---------NQEYGEPPDDSMAGYLRARQNMKSRNEYALLREDLINHLWNLEGNS 420          
BLAST of Gcaud3250.t1 vs. uniprot
Match: UPI000776ABF9 (uncharacterized protein LOC102714086 isoform X1 n=1 Tax=Oryza brachyantha TaxID=4533 RepID=UPI000776ABF9)

HSP 1 Score: 129 bits (323), Expect = 1.650e-33
Identity = 70/176 (39.77%), Postives = 109/176 (61.93%), Query Frame = 0
Query:    8 PSVEYAIAGQTRNIPYWLADGIYPKYPYFVQTVSHPLTKKEKVMAAHQEARRKDVERAFGVLQARWHIIARPSRFWNKTTMRIVMQCCILLHNMMIESNRNEEE-PEDVHELVANASFGNDATVMWELAASQEEVIPPPGTIAAICALQRLSNDEREYLKTRRLVMQNLWDTFGNT 182
            P V+Y+I G+  NI Y+LADGIYP++P FV+++  P T+K K+ A HQE  RKDVE AFG+LQ+R+ I+ RP+R + +  +  +M  CI+LHNM+IE  +N E+ P D++E  AN  F  +AT+        E+V+     IA         +D + Y + +  ++ ++W  FGN+
Sbjct:   88 PEVQYSINGRQYNIGYYLADGIYPEWPVFVKSIREPQTEKHKIFAQHQEGARKDVECAFGILQSRFSILRRPTRLYEQGDLEHIMLACIILHNMIIEYEKNIEQIPLDLNE-EANKYFVQEATISHGENPEMEDVLNR--NIAL--------HDRQVYKQLQSDLIDHIWQKFGNS 252          
BLAST of Gcaud3250.t1 vs. uniprot
Match: UPI00098E1180 (uncharacterized protein LOC109834537 n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E1180)

HSP 1 Score: 129 bits (324), Expect = 1.050e-32
Identity = 71/181 (39.23%), Postives = 107/181 (59.12%), Query Frame = 0
Query:    1 MAEGSYPPSVEYAIAGQTRNIPYWLADGIYPKYPYFVQTVSHPLTKKEKVMAAHQEARRKDVERAFGVLQARWHIIARPSRFWNKTTMRIVMQCCILLHNMMIESNRNEEEPEDVHELVANASFGNDATVMWELAASQEEVIPPPGTIAAICALQRLSNDEREYLKTRRLVMQNLWDTFGN 181
            +++G  PP+  Y I G+  ++ Y+LADGIYPK+P  VQT+S+   KK++  A  QEA RKDVERAFGVLQ+R+ II  P+RFW+K T+  +M  CI++HNM++E  R+E+E   +            +T+   L A   E+         +   +RL N E  Y   R  ++++LW+  GN
Sbjct:  190 LSQGIAPPA-HYTIQGKNYDVGYYLADGIYPKWPTLVQTISNSDDKKKQYFAMMQEACRKDVERAFGVLQSRFAIIKGPARFWDKRTLHDIMTACIIMHNMIVEDERDEQEDVVI------------STLQSILNAENMEITETERFQRFLARHKRLKNKEA-YFALRNALIEHLWERHGN 356          
BLAST of Gcaud3250.t1 vs. uniprot
Match: UPI00098E7CAD (uncharacterized protein LOC109828711 n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E7CAD)

HSP 1 Score: 124 bits (312), Expect = 1.140e-32
Identity = 72/181 (39.78%), Postives = 107/181 (59.12%), Query Frame = 0
Query:    1 MAEGSYPPSVEYAIAGQTRNIPYWLADGIYPKYPYFVQTVSHPLTKKEKVMAAHQEARRKDVERAFGVLQARWHIIARPSRFWNKTTMRIVMQCCILLHNMMIESNRNEEEPEDVHELVANASFGNDATVMWELAASQEEVIPPPGTIAAICALQRLSNDEREYLKTRRLVMQNLWDTFGN 181
            +++G  PP+  Y I G+  ++ Y+LADGIYPK+P  VQT+S+   KK++  A  QEA RKDVERAFGVLQ+R+ II  P+RFW+K T+  +M  CI++HNM++E  R+E+E  DV  +    S  N         A   E+         +   +RL N E  +   R  ++++LW+  GN
Sbjct:   17 LSQGITPPA-HYTIQGKNYDVGYYLADGIYPKWPTLVQTISNSDDKKKQYFAMMQEACRKDVERAFGVLQSRFAIIKGPARFWDKRTLHDIMTACIIMHNMIVEDERDEQE--DV-VISTPQSIPN---------AENMEITETERFQRFLARHKRLKNKEAHFA-LRNALIEHLWERHGN 183          
The following BLAST results are available for this feature:
BLAST of Gcaud3250.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QIM3_CHOCR1.330e-6252.97Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QSZ8_CHOCR1.920e-5548.59Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QCH5_CHOCR4.540e-5148.65Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QB99_CHOCR3.300e-5048.65Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QEW9_CHOCR1.910e-4366.35Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QEL5_CHOCR5.910e-3440.33Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A336MR40_CULSO1.060e-3338.86CSON005106 protein n=1 Tax=Culicoides sonorensis T... [more]
UPI000776ABF91.650e-3339.77uncharacterized protein LOC102714086 isoform X1 n=... [more]
UPI00098E11801.050e-3239.23uncharacterized protein LOC109834537 n=1 Tax=Aspar... [more]
UPI00098E7CAD1.140e-3239.78uncharacterized protein LOC109828711 n=1 Tax=Aspar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006912Harbinger transposase-derived proteinPFAMPF04827Plant_trancoord: 7..108
e-value: 2.3E-39
score: 135.1
NoneNo IPR availablePANTHERPTHR22930:SF181OS06G0597250 PROTEINcoord: 8..122
IPR045249Putative nuclease HARBI1-likePANTHERPTHR22930UNCHARACTERIZEDcoord: 8..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_138_length_44555_cov_4.790842contigNODE_138_length_44555_cov_4.790842:233..805 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3250.t1Gcaud3250.t1Gracilaria caudata M_176_S67 malemRNANODE_138_length_44555_cov_4.790842 233..805 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3250.t1 ID=Gcaud3250.t1|Name=Gcaud3250.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=191bp
MAEGSYPPSVEYAIAGQTRNIPYWLADGIYPKYPYFVQTVSHPLTKKEKV
MAAHQEARRKDVERAFGVLQARWHIIARPSRFWNKTTMRIVMQCCILLHN
MMIESNRNEEEPEDVHELVANASFGNDATVMWELAASQEEVIPPPGTIAA
ICALQRLSNDEREYLKTRRLVMQNLWDTFGNTFFWEDNCS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006912Harbinger_derived_prot
IPR045249HARBI1-like