Gcaud3177.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud3177.t1 vs. uniprot
Match: A0A2V3J6F5_9FLOR (Chromatin structure-remodeling complex subunit snf21 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6F5_9FLOR) HSP 1 Score: 125 bits (315), Expect = 9.180e-32 Identity = 62/69 (89.86%), Postives = 68/69 (98.55%), Query Frame = 0
Query: 1 MGVDKNPQTEQETQLTEEESLLIIRRLHQVLRPFLLRRMKSDVLRMGEQLPAKQEHIVLCEMSAWQRYI 69
MGV++NPQ EQETQLTEEESLLIIRRLHQVLRPFLLRRMK+DVLRMGEQLPAKQEH+VLCEMSAWQ+Y+
Sbjct: 657 MGVERNPQMEQETQLTEEESLLIIRRLHQVLRPFLLRRMKADVLRMGEQLPAKQEHVVLCEMSAWQKYM 725
BLAST of Gcaud3177.t1 vs. uniprot
Match: R7QQ29_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ29_CHOCR) HSP 1 Score: 110 bits (275), Expect = 2.310e-26 Identity = 57/69 (82.61%), Postives = 61/69 (88.41%), Query Frame = 0
Query: 1 MGVDKNPQTEQETQLTEEESLLIIRRLHQVLRPFLLRRMKSDVLRMGEQLPAKQEHIVLCEMSAWQRYI 69
MGV TEQ+ QLTEEESLLIIRRLHQVLRPFLLRRMK DVLRMGEQLP KQEHI+LCEMSAWQR++
Sbjct: 653 MGVGNISTTEQQAQLTEEESLLIIRRLHQVLRPFLLRRMKDDVLRMGEQLPEKQEHILLCEMSAWQRHM 721
BLAST of Gcaud3177.t1 vs. uniprot
Match: A0A1X6PJ20_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PJ20_PORUM) HSP 1 Score: 103 bits (256), Expect = 8.390e-24 Identity = 50/61 (81.97%), Postives = 59/61 (96.72%), Query Frame = 0
Query: 9 TEQETQLTEEESLLIIRRLHQVLRPFLLRRMKSDVLRMGEQLPAKQEHIVLCEMSAWQRYI 69
TE++ QLTEEESLLIIRRLHQVLRPFLLRR+KSDVLRMGEQLP+K EH++LC+MSAWQR++
Sbjct: 199 TEEQAQLTEEESLLIIRRLHQVLRPFLLRRLKSDVLRMGEQLPSKLEHVLLCDMSAWQRFM 259
BLAST of Gcaud3177.t1 vs. uniprot
Match: M2XAC2_GALSU (Chromatin remodeling complex SWI/SNF component, Snf2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XAC2_GALSU) HSP 1 Score: 94.4 bits (233), Expect = 1.090e-20 Identity = 44/55 (80.00%), Postives = 53/55 (96.36%), Query Frame = 0
Query: 15 LTEEESLLIIRRLHQVLRPFLLRRMKSDVLRMGEQLPAKQEHIVLCEMSAWQRYI 69
L+EEE+LLIIRRLHQVLRPFLLRR+KSDVLRMG+QLP KQEH++LCE+SAWQ+ +
Sbjct: 994 LSEEETLLIIRRLHQVLRPFLLRRLKSDVLRMGDQLPTKQEHVILCEISAWQKMV 1048
BLAST of Gcaud3177.t1 vs. uniprot
Match: A0A5J4YP78_PORPP (Chromatin structure-remodeling complex subunit snf21 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YP78_PORPP) HSP 1 Score: 93.2 bits (230), Expect = 2.780e-20 Identity = 44/68 (64.71%), Postives = 58/68 (85.29%), Query Frame = 0
Query: 2 GVDKNPQTEQETQLTEEESLLIIRRLHQVLRPFLLRRMKSDVLRMGEQLPAKQEHIVLCEMSAWQRYI 69
G N ++ QLTEEE++L+I RLHQVLRPFLLRR+K++VL+MGEQLP+KQE ++LC+MSAWQRY+
Sbjct: 674 GGSGNNAADEHAQLTEEENMLVIFRLHQVLRPFLLRRLKAEVLKMGEQLPSKQEDVILCDMSAWQRYM 741
BLAST of Gcaud3177.t1 vs. uniprot
Match: A0A7S0BRV0_9RHOD (Hypothetical protein (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BRV0_9RHOD) HSP 1 Score: 90.9 bits (224), Expect = 8.690e-20 Identity = 48/72 (66.67%), Postives = 62/72 (86.11%), Query Frame = 0
Query: 7 PQTEQETQ--LTEEESLLIIRRLHQVLRPFLLRRMKSDVLRMGEQLPAKQEHIVLCEMSAWQR--YIRLARE 74
P+ EQ++ L+EEESLLIIRRLHQVL+PF+LRR+KSDVL+MGEQLP KQE I+LC+MSAWQ+ Y R+ ++
Sbjct: 188 PEGEQQSNQILSEEESLLIIRRLHQVLQPFVLRRLKSDVLKMGEQLPTKQEDIILCDMSAWQQHTYARILKQ 259
BLAST of Gcaud3177.t1 vs. uniprot
Match: A0A7S3A431_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A431_9RHOD) HSP 1 Score: 90.9 bits (224), Expect = 1.800e-19 Identity = 48/72 (66.67%), Postives = 61/72 (84.72%), Query Frame = 0
Query: 7 PQTEQETQ--LTEEESLLIIRRLHQVLRPFLLRRMKSDVLRMGEQLPAKQEHIVLCEMSAWQR--YIRLARE 74
P+ EQ+ L+EEESLLIIRRLHQVL+PF+LRR+KSDVL+MGEQLP KQE I+LC+MSAWQ+ Y R+ ++
Sbjct: 602 PEGEQQANQILSEEESLLIIRRLHQVLQPFVLRRLKSDVLKMGEQLPTKQEDIILCDMSAWQQHTYARIVKQ 673
BLAST of Gcaud3177.t1 vs. uniprot
Match: M1VGM5_CYAM1 (Chromatin remodeling complex SWI/SNF component, Snf2 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VGM5_CYAM1) HSP 1 Score: 80.9 bits (198), Expect = 5.900e-16 Identity = 39/56 (69.64%), Postives = 50/56 (89.29%), Query Frame = 0
Query: 14 QLTEEESLLIIRRLHQVLRPFLLRRMKSDVLRMGEQLPAKQEHIVLCEMSAWQRYI 69
+LTEEESLLII RLH+VLRPFLLRR+K+++LR GE+LP K+E + LC+MSAWQR +
Sbjct: 800 ELTEEESLLIINRLHKVLRPFLLRRLKNEILRGGEKLPEKREVLFLCDMSAWQRLV 855
BLAST of Gcaud3177.t1 vs. uniprot
Match: A0A7J7IEL1_9RHOD (SWI SNF, matrix associated, actin dependent regulator of chromatin, sub a, member n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IEL1_9RHOD) HSP 1 Score: 78.6 bits (192), Expect = 3.830e-15 Identity = 37/59 (62.71%), Postives = 51/59 (86.44%), Query Frame = 0
Query: 11 QETQLTEEESLLIIRRLHQVLRPFLLRRMKSDVLRMGEQLPAKQEHIVLCEMSAWQRYI 69
++ + TEEE+LLII RLH+VLRPFLLRR+K+++LR GE+LP K+E + LC+MSAWQR +
Sbjct: 796 EQVEFTEEEALLIINRLHKVLRPFLLRRLKNEILRGGEKLPEKREVMFLCDMSAWQRLV 854
BLAST of Gcaud3177.t1 vs. uniprot
Match: M2XUV6_GALSU (Chromatin remodeling complex / DNA-dep ATPase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XUV6_GALSU) HSP 1 Score: 73.9 bits (180), Expect = 1.610e-13 Identity = 41/64 (64.06%), Postives = 49/64 (76.56%), Query Frame = 0
Query: 14 QLTEEESLLIIRRLHQVLRPFLLRRMKSDVLRMGEQLPAKQEHIVLCEMSAWQRYIRLARETSS 77
+L EEE++LII RLHQVLRPFLLRRMKSDV QLP K EH++ CE+SAWQ+ L R+ SS
Sbjct: 715 ELDEEETMLIINRLHQVLRPFLLRRMKSDV---ESQLPEKTEHVINCELSAWQKV--LYRQISS 773 The following BLAST results are available for this feature:
BLAST of Gcaud3177.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud3177.t1 ID=Gcaud3177.t1|Name=Gcaud3177.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=85bpback to top |