Gcaud3176.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3176.t1
Unique NameGcaud3176.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length602
Homology
BLAST of Gcaud3176.t1 vs. uniprot
Match: A0A2V3J6F5_9FLOR (Chromatin structure-remodeling complex subunit snf21 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6F5_9FLOR)

HSP 1 Score: 1019 bits (2636), Expect = 0.000e+0
Identity = 520/602 (86.38%), Postives = 566/602 (94.02%), Query Frame = 0
Query:    1 MASQQAVRLLEAHPHRAPLEAEQLRALCNLLYTLKRGLGSAAAAKTPVYNAILRVLKAHTCPLPNTTVTFAQVQAARLQLLAEKLYREHKPFPQELNAAITQGLVSGFDPATGFRVPPETQNVQLARQQLQEQDEIMKERQRLQELQADFHKSRASCVEAARAHEPELPTPEEMLPWEQRRIPIPRQGLQRGRHMGLDQNTLVNERYRSLKVRTDAICSDIARILTDHGTGVKTLSPRNAALLETRIRHVKLMSLQSRIRQSVWNEYQTGTLDGRRTSRAKVRTLKQLQREYERVERARHRQVETEEKDARRKRQAWINAMADHLNKFRSYHRDTVKRGVRAVNKALLKYHEELSKNASRAEREAEKARIQKLKDDDEEGYLELVKQTKNTRVLELLEQTDKYLRELGAVVKEERARSGVVEYENNTAAKIGRRSNYYEIAHAIKEEVRTQSSLLVGGTLKEYQLHGIQWMVSLYNNRLNGILADEMGLGKTVQTLGLIAHLMERKDNPGPYLIIVPLSTVSNWEMEFARWAPVIRVVVFKGDARARKRLYEEVIEKKSFNVCLVTYEYVVRGKNFLKRVEWQHIIIDEGHRIKNHE-KLAN 601
            MASQQA RLLEAHPHRAPLE EQLRALCNLL TLKR LG   AAKTPVY+AILRVLKAHTCPLPN  VTF+QVQAARLQLLAEKLYR+ KPFPQELNAAI+QGLVSGFDP+TG R+PPETQN+ LA+QQ QE+DEIMKERQRLQ+LQADF KSR SC+EAAR H+P  PTPEE+LPWEQRRIPIP QG    R+MGLD+N L+NER+RSLKVRTDA+C++I RILT+H +GV+TLSPR+ ALLETRIRHVKL+SLQSR+RQ+VWNE+QTGTLDGRRTSR+KVRTLKQLQREYERVERAR RQ+E EEKDARRKRQAW+NAMADHLNKFRSYHRDTVKRGVRA+NKALL+YHE+++KNA+R EREAEKARIQKLKDDDEEGYLELVKQTKNTRVLELLEQTDKYLRELGAVVKEERARSGVVEYENNTAAK G RSNYYEIAHAIKEEV+TQSSLLVGGTLKEYQLHGIQWMVSLYNNRL+GILADEMGLGKT+QT+GLIAHLMERKDNPGPYLIIVPLST+SNWEMEFARWAP IRV+VFKGDAR RKRLYE+VIEKKSFNVCLVTYEYVVRGKN LKRVEWQHIIIDEGHRIKNHE KL++
Sbjct:    1 MASQQAARLLEAHPHRAPLEPEQLRALCNLLVTLKRLLGPEGAAKTPVYHAILRVLKAHTCPLPNANVTFSQVQAARLQLLAEKLYRDQKPFPQELNAAISQGLVSGFDPSTGLRIPPETQNMHLAKQQFQEKDEIMKERQRLQQLQADFQKSRTSCLEAARGHQPPEPTPEELLPWEQRRIPIPPQGPPHARYMGLDRNVLLNERHRSLKVRTDAVCAEITRILTEHSSGVRTLSPRSTALLETRIRHVKLLSLQSRMRQAVWNEFQTGTLDGRRTSRSKVRTLKQLQREYERVERARQRQIENEEKDARRKRQAWVNAMADHLNKFRSYHRDTVKRGVRAMNKALLRYHEDVAKNANREEREAEKARIQKLKDDDEEGYLELVKQTKNTRVLELLEQTDKYLRELGAVVKEERARSGVVEYENNTAAKPGTRSNYYEIAHAIKEEVKTQSSLLVGGTLKEYQLHGIQWMVSLYNNRLHGILADEMGLGKTIQTIGLIAHLMERKDNPGPYLIIVPLSTISNWEMEFARWAPAIRVIVFKGDARTRKRLYEDVIEKKSFNVCLVTYEYVVRGKNLLKRVEWQHIIIDEGHRIKNHESKLSS 602          
BLAST of Gcaud3176.t1 vs. uniprot
Match: R7QQ29_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ29_CHOCR)

HSP 1 Score: 757 bits (1955), Expect = 8.860e-255
Identity = 404/598 (67.56%), Postives = 474/598 (79.26%), Query Frame = 0
Query:    1 MASQQAVRLLEAHPHRAPLEAEQLRALCNLLYTLKRGLGSAAAAKTPVYNAILRVLKAHTCPLPNTTVTFAQVQAARLQLLAEKLYREHKPFPQELNAAITQGLVSGFDPATGFRVPPETQNVQLARQQLQEQDEIMKERQRLQELQADFHKSRASCVEAARAH-EPELPTPEEMLPWEQRRIPIPRQGLQRGRHMGLDQNTLVNERYRSLKVRTDAICSDIARILTDHGTGVKTLSPRNAALLETRIRHVKLMSLQSRIRQSVWNEYQTGTLDGRRTSRAKVRTLKQLQREYERVERARHRQVETEEKDARRKRQAWINAMADHLNKFRSYHRDTVKRGVRAVNKALLKYHEELSKNASRAEREAEKARIQKLKDDDEEGYLELVKQTKNTRVLELLEQTDKYLRELGAVVKEERARSGVVEYENNTAAKIGRRSNYYEIAHAIKEEVRTQSSLLVGGTLKEYQLHGIQWMVSLYNNRLNGILADEMGLGKTVQTLGLIAHLMERKDNPGPYLIIVPLSTVSNWEMEFARWAPVIRVVVFKGDARARKRLYEEVIEKKSFNVCLVTYEYVVRGKNFLKRVEWQHIIIDEGHRIKNHE 597
            M+ Q ++ LL  H HR PL  EQ+ AL N L+ LK  LG   A +T VY AILR+LKAH  PLP  +V+FAQVQA+RLQ  AE+   E K  P+E++ AI QGLV GFDP TG R+P   Q+  L  QQ +E+DE+M ER+RL+ LQADF K++    +  RA  E   P P  ++PWE+R +P+P   +       LD  TL  ER+RSL+ RTD I  +++  L +H  G   L PR AALLETR RHV L+ LQ ++R ++W E++    +GRR+S+ + R LKQLQRE+E+VERAR RQ+E EEK+ARRKRQAW+NAM DHLNKFRSYHRD V+RGVRA+ KA+LKYHEE ++NASRAEREAEKARIQ LKDDDEEGYLELV++TKNTRVLELL+QTDKYL++LGAVVKEER RSGVVEYENN   K G R +YY IAHAIKEEV  QSSLLVGG LKEYQLHGIQWMVSLYNNRLNGILADEMGLGKT+QTLGLIAHLMERKDNPGPYLIIVPLST+SNWE+EFARWAP +RVVVFKGDA+ARKRLYEEVIEKKSFNVCLVTYEYVVRGKNFLKR+EWQH+IIDEGHRIKNHE
Sbjct:    1 MSLQDSMTLLNNHRHRIPLRREQIHALANALHALKHTLGPEKAQQTTVYTAILRLLKAHVSPLPTASVSFAQVQASRLQGWAERFLAEGKELPKEISDAIAQGLVFGFDPRTGLRIPRHQQDELLRAQQQRERDEMMHERERLRLLQADFTKAK----DGTRARPENVAPDPVHLIPWEERVLPVPTGTVAALYLPKLDIETLNRERFRSLRNRTDQIQKEVSHALAEHANGTHVLKPRIAALLETRQRHVSLLDLQRKMRVNIWEEHRM-VENGRRSSKLRGRILKQLQREFEKVERARMRQLEVEEKEARRKRQAWVNAMNDHLNKFRSYHRDVVRRGVRAITKAVLKYHEEYARNASRAEREAEKARIQALKDDDEEGYLELVRKTKNTRVLELLDQTDKYLKQLGAVVKEERVRSGVVEYENNNDEKSGARHDYYGIAHAIKEEVDEQSSLLVGGVLKEYQLHGIQWMVSLYNNRLNGILADEMGLGKTIQTLGLIAHLMERKDNPGPYLIIVPLSTISNWELEFARWAPAVRVVVFKGDAKARKRLYEEVIEKKSFNVCLVTYEYVVRGKNFLKRIEWQHLIIDEGHRIKNHE 593          
BLAST of Gcaud3176.t1 vs. uniprot
Match: A0A7S3A431_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A431_9RHOD)

HSP 1 Score: 401 bits (1031), Expect = 2.130e-121
Identity = 247/586 (42.15%), Postives = 350/586 (59.73%), Query Frame = 0
Query:   16 RAPLEAEQLRALCNLLYTLKRGLGSAAAAKTPVYNAILRVLKAHTCPLPNTTVTFAQVQAARLQLLAEKLYREHKPFPQELNAAITQGLVSGFDPATGFRVPPETQNVQLARQQLQEQDEIMKERQRLQELQADFHKSRASCVEAARAHEPELPTPEEMLPWEQRRIPIPRQGLQRGRHMGLDQNTLVNERYRSLKVRTDAICSDIARILTDHGTGVKTLSPRNAALLETRIRHVK--LMSLQSRIRQSVWNEYQTGTLDGRRTSRAKVRTLKQLQREYERVERARHRQVETEEKDARRKRQAWINAMADHLNKFRSYHRDTVKRGVRAVNKALLKYHEELSKNASRAEREAEKARIQKLKDDDEEGYLELVKQTKNTRVLELLEQTDKYLRELGAVVKEERARSG--VVEYENNTAAKIGRRSNYYEIAHAIKEEVRTQSSLLVGGTLKEYQLHGIQWMVSLYNNRLNGILADEMGLGKTVQTLGLIAHLMERKDNPGPYLIIVPLSTVSNWEMEFARWAPVIRVVVFKGDARARKRLYEEVIEKKSFNVCLVTYEYVVRGKNFLKRVEWQHIIIDEGHRIKNHE 597
            R PL+  Q+  +  L+  L+   G   A + P +  +LR+L+AHT P+P + +TFAQ  A +LQ++  ++ +  +P PQ+L  A+  GL  G         P  T+                          AD    R    +   A   E P    +LP + R IPI R    + +   +D + L+ ER   L+               D+ + V+     + ALL    +H+   ++S Q  +R  +  E+     DGR  SR + R L+ LQRE ERV+R R + +E EE + R  +  WINA+ +H+  F  Y RD+ +R +R VN+ ++K+H+++++ A RAEREAEK RIQ LK++DEEGYLELV++TKN R+LE+L QTD YL+EL   +K+ER  SG  V E E +  ++      Y EIAHA  E +  Q ++L  GTLK+YQ  G+QWMVSLYNNRLNGILADEMGLGKTVQT+ LI HL+E+K NPGPYL+IVPLST++NWE EF RWAP ++ +V+ GD + R+ LYE  ++K + NVCL T+EYV+RGK  L +++WQ+IIIDEGHRIKNHE
Sbjct:   23 RVPLKGTQIMKILALIKDLRARWGDKRALQDPRFRTLLRLLRAHTRPVPGSNLTFAQAHAIKLQMIIYQILKTRQPMPQKLVEAMAMGLTIG--------KPRHTK--------------------------AD----RPGTKDQGTAGAQENPF---LLPADAR-IPIRRPDPSQWKPTAVDSSLLLEERQSMLE---------------DYASRVRDPKSNSRALL----KHISVDMLSKQRALRARIHTEHALADRDGRFGSRNRERALRTLQRELERVDRTRTKLLEQEEAERRTAKAKWINALNNHITGFIRY-RDSARRQIRNVNRGVMKHHDDVARIADRAEREAEKKRIQMLKENDEEGYLELVRKTKNARLLEVLSQTDSYLKELSKTLKDERLESGDAVDEDEMDDDSR-----KYKEIAHARTESITDQPTILEFGTLKQYQREGLQWMVSLYNNRLNGILADEMGLGKTVQTIALICHLVEKKQNPGPYLVIVPLSTMNNWESEFDRWAPKLQYIVYAGDKKHRRTLYENHLQKNTVNVCLATFEYVLRGKGSLGQIKWQYIIIDEGHRIKNHE 541          
BLAST of Gcaud3176.t1 vs. uniprot
Match: M2XAC2_GALSU (Chromatin remodeling complex SWI/SNF component, Snf2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XAC2_GALSU)

HSP 1 Score: 360 bits (924), Expect = 2.280e-106
Identity = 231/605 (38.18%), Postives = 353/605 (58.35%), Query Frame = 0
Query:    9 LLEAHPHRAPLEAEQLRALCNLLYTL-KRGLGSAAAAKTPVYNAILRVLKAHTCPLPNTTVTFAQVQAARLQLLAEKLYREHKPFPQE-LNAA----ITQGLVSGFDPATGFRVPPETQNVQLARQQLQEQDEIMKERQRLQELQADFHKSRASCVEAARAHEPELPTPEEMLPWEQRRIPIPRQGLQRGRHMGLDQNTLVNERYRSLKVRTDAICSDIARILTDHGTGVKTLSPRNAALLETRIRHVK--LMSLQSRIRQSVWNEYQTGTLDGRRTSRAKVRTLKQLQREYERVERARHRQVETEEKDARRKRQAWINAMADHLNKFRSYHRDTVKRGVRAVNKALLKYHEELSKNASRAEREAEKARIQKLKDDDEEGYLELVKQTKNTRVLELLEQTDKYLRELGAVVKEERARS-----GVVEYENNTAAKIGRRSN---YYEIAHAIKEEVRTQSSLLVGGTLKEYQLHGIQWMVSLYNNRLNGILADEMGLGKTVQTLGLIAHLMERKDNPGPYLIIVPLSTVSNWEMEFARWAPVIRVVVFKGDARARKRLYEEVIEKKSFNVCLVTYEYVVRGKNFLKRVEWQHIIIDEGHRIKNHE 597
            +L +  HR PL+ + L  +  LL    KR L S        Y  ++++LKAHT P PN+ +TF  + A R+Q       +     P++ LNA+    I  G +   +       PPE       RQQ+                   F +S              LP P E L  +    P+    L++      + + LV    R      + + ++I+    +    V+      A     RI++ K  L+ LQ ++R+ V  E +     G+  S++++R+ + L +E E++ER   +++E +E++ R+   ++++++  H+N FR YH++ V R  R+V +++L+YHE+ ++   RAE+EAE+ RI  LK++DEEGY+ L++QTKN R+L++L QTD+YLR LGAVVK++R  +       +E E      +  R N   YYEIAHAIKE +    ++L GGTLK+YQ+ G+QW+VSLY N LNGILADEMGLGKT+Q + L+A+L+E+K+N GP+LI+VPLST+SNWE+EF +WAP + VVVFKGD + RK LY+ VI+  +FNVCL T+E+V RGKN L +VEW ++I+DEGHR+KNHE
Sbjct:  372 ILTSRLHRFPLKPKILFGVIELLKCQRKRNLPSEETK----YFILMKLLKAHTVPYPNSILTFRHLFALRVQYRIFYEMKRGGRLPEDTLNASRALTIGSGSIPQVEKMNNKSKPPERN---FTRQQV-------------------FVQS--------------LPFPAEKLSSDLNITPLDSSFLRK------EADRLVTTLSRRF---ANKLATEISSFKCNEDASVEDSKRWGAQKRTLRIQYSKANLVVLQRKLRRRVLEERRMAEEQGKLGSKSRLRSFRALMKEAEKMERFMLKEMEAQEREKRKNFVSFLSSLMSHINNFRQYHKEYVHRLRRSVARSVLRYHEDKARAVERAEKEAERRRIIALKENDEEGYVNLLRQTKNERLLQVLNQTDEYLRHLGAVVKQQRDGTLNDGQHYLEKEETNKTDVLSRENCQTYYEIAHAIKEPITELPTILQGGTLKQYQIQGLQWLVSLYVNHLNGILADEMGLGKTIQAIALLAYLVEKKNNSGPFLIVVPLSTLSNWELEFEKWAPSLHVVVFKGDRKQRKSLYDTVIQPLNFNVCLTTFEFVSRGKNLLGKVEWNYLIVDEGHRMKNHE 927          
BLAST of Gcaud3176.t1 vs. uniprot
Match: A0A5J4YP78_PORPP (Chromatin structure-remodeling complex subunit snf21 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YP78_PORPP)

HSP 1 Score: 350 bits (897), Expect = 1.030e-102
Identity = 241/642 (37.54%), Postives = 339/642 (52.80%), Query Frame = 0
Query:   33 TLKRGLGSAAAAKTPVYNAILRVLKAHTCPLPNTTVTFAQVQAARLQLLAEKLYREHKPFPQELNAAITQGLVSGFDPATGFRVPPETQNVQLARQQLQEQDEIMKERQRLQELQADFHKSRASCVEA------ARAHEPEL-PTPE------------EMLPWEQRRIPIPRQGLQRG---------RHMGLDQNTLVNERYRSLKVRTDAICSDIARILTDHGTGVKTLSPRNAA------LLETRIRHVK---------LMSLQSRIRQSVWNEYQTGTLD-----GRRTSRAKVRTLKQLQREYERVERARHRQVETEEKDARRKRQAWINAMADHLNKFRSYHRDTVKRGVRAVNKALLKYHEELSKNASRAEREAEKARIQKLKDDDEEGYLELVKQTKNTRVLELLEQTDKYLRELGAVVK--EERARS-----------------GVVEYENNTAAKI----------GRRSNYYEIAHAIKEEVRTQSSLLVGGTLKEYQLHGIQWMVSLYNNRLNGILADEMGLGKTVQTLGLIAHLMERKDNPGPYLIIVPLSTVSNWEMEFARWAPVIRVVVFKGDARARKRLYEEVIEKKSFNVCLVTYEYVVRGKNFLKRVEWQHIIIDEGHRIKNHE 597
            T++  +G   A+  P Y  ++++L AH     N   TF+Q QA + Q+    L   ++P P++    +  GL SG  P      PPE                          L A+F  + +S          A    P++ P P             E+LP   RRI + RQG +           + M  +Q  L  + + +   R  A+   +   +++H    +     +AA      L   R  +V+         L  LQ ++R  V+ E   G        GR   R K+   +QL REY                   ++R AW +A+ DH   F+SYH   + R  R   +A++K+ +EL+K+  +AEREA+KAR+QKL  +DEEGY+E+V+ +KN R+ ELL QTD+YL++LGA VK  +  A+S                 G  +      A+           G    YYEIAHA KE+V  Q  +++GG LKEYQ+ G+QWMVSLYNN +NGILADEMGLGKTVQT+ L++HLME+K N GP+LI+VPLST+SNWE+EF RWAP IRV+VFKGD + RK L++EVI K +FNVCL+TYEYVVRGKN LK+VEW++II+DEGHR+KN E
Sbjct:    3 TMRADMGPDVASADPRYRVLVQLLAAHLRSQQNNAFTFSQWQAFKSQVYIYTLMSRNQPVPEQYIQLLKAGLASGRRP------PPEA-------------------------LGAEFSATSSSAAATPGATGNAMGAAPKMAPLPSSSPISITKENLHELLP--DRRIVVQRQGPRADVNAPAAIDDQMMRQEQARLRRKLFENELQRRQALVRALRDQISEHERRQQACENDDAAEQSGVALARLRSDYVRVVAGARELTLFDLQRKVRSDVYGELTAGGTTNKGAVGREKQREKLN--RQLVREYXXXXXXXXXXXXXXXXXXXKRRNAWFSALTDHHQAFKSYHTG-MHRACRGTGRAVVKHFDELAKSQEKAEREAQKARMQKLMHEDEEGYIEMVRNSKNKRLKELLNQTDEYLKQLGATVKKTQREAKSRRRGXXXXXXXXDAGGMGDAQLHGGDGAQDDFGTTDDEDDGTHKTYYEIAHANKEKVEEQPKMMLGGKLKEYQMQGLQWMVSLYNNGMNGILADEMGLGKTVQTIALVSHLMEKKGNGGPFLIVVPLSTMSNWELEFQRWAPSIRVIVFKGDKKIRKSLFDEVILKAAFNVCLITYEYVVRGKNLLKKVEWEYIIVDEGHRMKNGE 608          
BLAST of Gcaud3176.t1 vs. uniprot
Match: M1VGM5_CYAM1 (Chromatin remodeling complex SWI/SNF component, Snf2 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VGM5_CYAM1)

HSP 1 Score: 293 bits (749), Expect = 8.740e-83
Identity = 212/599 (35.39%), Postives = 317/599 (52.92%), Query Frame = 0
Query:   49 YNAILRVLKAHTCPLPNTTVTFAQVQAARLQLLAEKLYREHKP----------------------FPQELNAAITQGLVSGFDPATGFRVPPETQNVQLARQQLQEQDEIMKERQRLQELQADFHKSRASCVEAARAH---EPELPTPEEMLPWEQRRIPIPRQGLQRGRHMGLDQNTLVNERYRSLKVRTDAICSDIARILTDHGTGVKTLSPRNAA---------LLETRIRH--VKLMSLQSRIRQSVWNEYQTGTLDGRRTSRAKVRTLKQLQREYERVERARHRQVETEEKDARRKRQAWINAMADHLNKFRSYHRDTVKRGVRAVNKALLKYHEELSKNASRAEREAEKARIQKLKDDDEEGYLELVKQTKNTRVLELLEQTDKYLRELGAVVKEER---------ARSGVVEYENNTAAKIGRRS--NYYEIAHAIKEEVRTQSSLLVGGTLKEYQLHGIQWMVSLYNNRLNGILADEMGLGKTVQTLGLIAHLMERKDNPGPYLIIVPLSTVSNWEMEFARWAPVIRVVVFKGDARARKRLYEEVIEKKS-----FNVCLVTYEYVVRGKNFLKRVEWQHIIIDEGHRIKN 595
            Y  +LR+L A  C   +   TF Q++A +LQL A++  R  +                        P  L  A+  GL+ G  P  G R+P   + +Q+  +  Q+      + + L   +A    S A   E   A    E  LP  + M            QG++  R   LD   +  ER R +  R +     +  IL    +  +    ++AA          +  RIRH  ++L+ LQ RIR+ +  E  T       +S  ++ + K+++ E  R ER   R  E +E++ RR   +   A+ ++   FR++ R+   R    +N+ + ++ EE  ++  R ERE    RIQ L++++EE Y  LV+ TKN R+  +LEQTD YLR+LGA+V E R         A         ++++  G+R+  +YYE+AH ++E V  QSSLL GG LK YQL G++W++SLYNNRLNG+LADEMGLGKTVQT+ L+ HL+E K + GP+LI+VPLSTVSNWE E A WAP ++V VFKGD  AR+RL  E+  + +     F++ L TYEY +R +  L ++ W +II+DEGHRIKN
Sbjct:  147 YQTVLRLLAAQACVKRHGAFTFPQLKALQLQLQAQRYLRLAEAAARAATAAGRHPRAVFRRTGAVLPAVLRRAMVTGLICGRFP-DGTRMPSTEECLQVMTEIEQQCQSEFPKWEELYAAEAALASSEAQYTEQVCAQCSGERWLPVGKVMNA----------QGVELSRPPPLDPILVCRERDREVHHRLNEARRALDTILHALESEFRAAYTQDAAPIPEHLVRTYVHVRIRHAMLRLLRLQQRIRERIL-EAGTEARGSNASSHGRL-SKKRIRSELARYEREERRAREADEREQRRHTLSMWRAVEEYATSFRAFFREEKTRNRLRLNREIHRFFEERERSDQRREREXXXXRIQALRENNEEAYRALVQNTKNERLKLILEQTDDYLRQLGAIVSENRSVLTDRAADAADPASSLSLSSSSMAGQRAADSYYELAHRVRERVLNQSSLLTGGELKHYQLVGVEWLLSLYNNRLNGVLADEMGLGKTVQTIALLCHLIEFKQDEGPFLIVVPLSTVSNWESELAHWAPSLKVSVFKGDRTARRRLANELFVRDASGRFPFHILLTTYEYALRARAALSKIIWSYIIVDEGHRIKN 732          
BLAST of Gcaud3176.t1 vs. uniprot
Match: A0A397VSI8_9GLOM (SNF2 family N-terminal domain-containing protein n=3 Tax=Gigaspora TaxID=4873 RepID=A0A397VSI8_9GLOM)

HSP 1 Score: 275 bits (702), Expect = 1.650e-76
Identity = 161/419 (38.42%), Postives = 252/419 (60.14%), Query Frame = 0
Query:  195 MGLDQNTLVNERYRSLKVRTDAICSDIARILTDHGTGVKTLSPRNAALLETRIRHVKLMSLQSRIRQSVWNEYQTGTLDGRRTSRAKVRTLK-QLQREYERVERARHRQVETEEKDARRKRQAWINAMADHLNKFRSYHRDTVKRGVRAVNKALLKYHEELSKNASRAEREAEKARIQKLKDDDEEGYLELVKQTKNTRVLELLEQTDKYLRELG-AVVKEER--------ARSGV--------VEYENNTAAKIGRRSNYYEIAHAIKEEVRTQSSLLVGGTLKEYQLHGIQWMVSLYNNRLNGILADEMGLGKTVQTLGLIAHLMERKDNPGPYLIIVPLSTVSNWEMEFARWAPVIRVVVFKGDARARKRLYEEVIEKKSFNVCLVTYEYVVRGKNFLKRVEWQHIIIDEGHRIKN 595
            +GLD N +  ER R +K R      ++  IL +           N      +++ +K++ +Q R+RQ +    ++ TL    T+R+  R +K Q  R+    +R   +Q E  ++D ++K    I ++ +H      +HR +  + ++ + + ++ YH ++ K   +      K R++ LK+DDEE YL+L+ Q K+TR+  LL+QTD+YL  L  AVV ++R         R G+        +  + N A   G++ +YY +AH IKEEV  Q ++L+GG LK+YQ+ G+QWMVSLYNNRLNGILADEMGLGKT+QT+ L+ +L+E+K   GP+LI+VPLST++NW +EF RWAP +R  V+KG    RK L ++ I+   F V L TYEY+++ K+ L ++ W ++IIDEGHR+KN
Sbjct:  187 IGLDPNEIAAERERQIKARVQHRICELEYILEES-------KDENNKKKLIQLKGLKVLDIQKRLRQDIICVAKSTTL-ATTTNRSNYRRMKKQSMRDARITDRLEKQQREDRQRDKKQKHLDRIQSICNHGRDMIQWHRLSQAKQLK-LGRTVVNYHSQVEKEEQKRMERLSKERLRALKNDDEEAYLKLIDQVKDTRITHLLKQTDQYLDSLAQAVVAQQRDELHNDPTVRGGIELMDEEECIGDDENIAIVNGKKVDYYAVAHRIKEEVE-QPAMLIGGMLKDYQVKGLQWMVSLYNNRLNGILADEMGLGKTIQTISLVTYLIEKKRQNGPFLIVVPLSTLTNWTLEFDRWAPSVRKCVYKGAPNTRKELQQQFIKHVDFQVLLTTYEYIIKDKSILSKLRWVYVIIDEGHRMKN 595          
BLAST of Gcaud3176.t1 vs. uniprot
Match: A0A7J7IEL1_9RHOD (SWI SNF, matrix associated, actin dependent regulator of chromatin, sub a, member n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IEL1_9RHOD)

HSP 1 Score: 271 bits (693), Expect = 3.070e-75
Identity = 220/656 (33.54%), Postives = 324/656 (49.39%), Query Frame = 0
Query:   10 LEAHPH--RAPLEAEQLRALCNLLYTLKR-----GLGSAAAAKTP-------------------VYNAILRVLKAHTCPLPNTTVTFAQVQAARLQLLAEK---------------------LYREHKP-FPQELNAAITQGLVSGFDPATGFRVPPETQNVQLARQQLQEQDEIMKERQRLQELQADFHKSRASCVEAARAHEPELPTPEEMLPWEQRRIPIPRQGLQRGRHMGLDQNTLVNERYRSLKVRT-------DAICSDIARILTD-HGTGVKTLSPRNAALLETRIRHVKLMSLQSRIRQSVWNEYQTGTLDGR--RTSRAKVRTLKQLQREYERVERARHRQVETEEKDARRKRQAWINAMADHLNKFRSYHRDTVKRGVRAVNKALLKYHEELSKNASRAEREAEKARIQKLKDDDEEGYLELVKQTKNTRVLELLEQTDKYLRELGAVVKEERARSGVVEYENNTAAKIGRRSN-------YYEIAHAIKEEVRTQSSLLVGGTLKEYQLHGIQWMVSLYNNRLNGILADEMGLGKTVQTLGLIAHLMERKDNPGPYLIIVPLSTVSNWEMEFARWAPVIRVVVFKGDARARKRLYEEVIEKKS-----FNVCLVTYEYVVRGKNFLKRVEWQHIIIDEGHRIKN 595
            L A PH  R PL +EQL AL +L   ++         +A A  TP                    Y  +LR+L A      +   TF Q++A RLQL A +                     ++R   P  P  L  A+T GL+S   P  G R+P   + + +  +  ++  +   + + L   +A    S A   E  RA        E+ LP  +    + +QG++  R + LD   +  ER R ++ R        +A    +     + +        P    L   R+R  + M    R +Q V         + R   TS +   + K+++ E  R ER              R+  A   A+ ++   FR++ RD   R    +N+ L ++ EE  K+  R ERE    RIQ L++++EE Y  LV+ TKN R+  +L QTD+YLR+LGA+V+E R+      +   T    GR S+       YYE+ H ++E V+ QSSLL GG LK YQL G++W++SLYNN LNG+LADEMGLGKT+QT+ L+ H++E K + GP+LI+VPLSTVSNWE E   WAP ++V +FKGD  AR+RL  E+  + +     F+V L TYEY +R +  L +V W +II+DEGHRIKN
Sbjct:   85 LRATPHWQRQPLYSEQLHALLSLAAVVRAVPKPPANAAAEARATPDAGSAHRADDWESVLQRHKPYQTVLRLLAAQVRAKRDGGFTFPQLKALRLQLQAYRFLRLADAAGRAAMKTGRHPRTIFRRTGPVLPAVLRRAMTTGLMSARLP-DGARLPCIEECLHVMTEIERQCQQDFPQWEALYATEAALAASEAQHTEQVRAQ----CAAEQWLPVGK---VVNQQGVELTRPLPLDPVLICRERDREVRRRVFQARQALEAAAHSLESAFREAYAQDSMASIPDALVLAYLRVRSRQAMLRLLRSQQQVRERILEAASETRAPNTSSSGRLSNKRIRSELARQERXXXXXXXXXXXXXXRQTLAMWRALEEYATTFRTFFRDERTRTRIRLNRELHRFFEEREKSDQRREREXXXRRIQALRENNEEAYRALVQNTKNERLKLILNQTDEYLRQLGAIVRENRSDEDSA-WSQTTRDDAGRTSDGPRASESYYELVHRVREPVQQQSSLLTGGKLKHYQLVGVEWLLSLYNNGLNGVLADEMGLGKTIQTIALLCHIIEFKQDEGPFLIVVPLSTVSNWESELLHWAPSLKVSIFKGDKNARRRLANELFVRDAAGRYPFHVLLTTYEYALRARASLSKVVWSYIIVDEGHRIKN 731          
BLAST of Gcaud3176.t1 vs. uniprot
Match: A0A1Y2F9P4_9FUNG (Uncharacterized protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2F9P4_9FUNG)

HSP 1 Score: 268 bits (685), Expect = 6.150e-74
Identity = 156/405 (38.52%), Postives = 246/405 (60.74%), Query Frame = 0
Query:  195 MGLDQNTLVNERYRSLKVRTDAICSDIARILTDHGTGVKTLSPRNAALLETRIRHVKLMSLQSRIRQSVWNEYQTGTLDGRRTSRAKVRTLKQLQREYERVERARHRQVETE-EKDARRKRQAWINAMADHLNKFRSYHRDTVKRGVRAVNKALLKYHEELSKNASRAEREAEKARIQKLKDDDEEGYLELVKQTKNTRVLELLEQTDKYLRELGAVVKEERARSGVVEY---ENNTAAKIGRRSNYYEIAHAIKEEVRTQSSLLVGGTLKEYQLHGIQWMVSLYNNRLNGILADEMGLGKTVQTLGLIAHLMERKDNPGPYLIIVPLSTVSNWEMEFARWAPVIRVVVFKGDARARKRLYEEVIEKKSFNVCLVTYEYVVRGKNFLKRVEWQHIIIDEGHRIKN 595
            +G+D  +++ ER R +  R     +++  + ++     ++LS  NA +    ++ +KL+S Q ++R  V       T     T RA  R +K+   +  R+     RQ   + EK  R+    ++N++  H  + RS+H D  +     +   + ++H+++    ++   +  + R++ LK+DDEE YL+L+ QTK+TR+  LL+QT++YL  L   V  ++   G  +    E+       ++++YY I+H +KE +  Q S+L GGTLKEYQL G+QWMVSLYNNRLNGILADEMGLGKT+QT+ LI++L+E+K   GP+LIIVPLST++NW +EF +WAP I  VV+KG    RK +    I   +FNV L TYEY+++ +  L +++W HIIIDEGHR+KN
Sbjct:  407 VGVDIYSMIKERERKINSRIQYRINELESLPSNISN--QSLSTINAII---ELKALKLLSKQKKLRSEVLRGMIKATTFLNNTDRASYRRMKKQSLKEARITEKLERQQRIDREKRERQNFADYLNSIITHGRELRSFH-DKQQSKANKLGLGVQRFHKKIENEEAQRLAKLSQERLRALKEDDEEAYLKLIDQTKDTRITYLLQQTNEYLENLTKAVVTQQEEIGQDQPPLPEDTFGLDDDKKADYYNISHRVKEIITEQPSILTGGTLKEYQLKGLQWMVSLYNNRLNGILADEMGLGKTIQTISLISYLIEKKHQNGPFLIIVPLSTLTNWSLEFDKWAPSIVKVVYKGAPSVRKAIQYSEIRHGNFNVVLTTYEYIIKDRPVLSKIKWIHIIIDEGHRLKN 805          
BLAST of Gcaud3176.t1 vs. uniprot
Match: A0A0L0VSA2_9BASI (Uncharacterized protein n=3 Tax=Puccinia striiformis TaxID=27350 RepID=A0A0L0VSA2_9BASI)

HSP 1 Score: 268 bits (684), Expect = 6.300e-74
Identity = 170/450 (37.78%), Postives = 251/450 (55.78%), Query Frame = 0
Query:  196 GLDQNTLVNERYRSLKVRTDAICSDIARI---LTDHG-----------TGVKTLSPRNA---ALLETRIRHVKLMSLQSRIRQSVWNEYQTGTLDGRRTSRAKVRTLKQL-QREYERVERARHRQVETEEKDARRKRQAWINAMADHLNKFRSYHRDTVKRGVRAVNKALLKYHEELSKNASRAEREAEKARIQKLKDDDEEGYLELVKQTKNTRVLELLEQTDKYLRELGAVVKEERA----RSGVVEYENNTAAKI----------------------------GRRSNYYEIAHAIKEEVRTQSSLLVGGTLKEYQLHGIQWMVSLYNNRLNGILADEMGLGKTVQTLGLIAHLMERKDNPGPYLIIVPLSTVSNWEMEFARWAPVIRVVVFKGDARARKRLYEEVIEKKSFNVCLVTYEYVVRGKNFLKRVEWQHIIIDEGHRIKN 595
            GLD  TL ++R   +K R     +++  +   L DH            +   T    N    AL+E  I+ ++L+  Q  +R+ + N     T       RA ++  K+L  R+  + E+   RQ    E+  ++K    I+++  H N+F+S H ++ +  +    K+++K+H E  K   R      K R++ L+ DDEE YL+L+   K+TR+  LL QTD+YL  L   V +++     R G +  E + +  +                            G +++YY +AH IKEEV  QSSLL GG LKEYQ+ G+QWMVSLYNNRLNGILADEMGLGKT+QT+ LI  LME K  PGPYL+IVPLST+ NW +EF +WAP ++VVV+KG    RK+L  + I + +F V L TYEY+++ +  L +++W H+IIDEGHR+KN
Sbjct:   82 GLDPYTLKHQRDELIKTRIKWRLNELESLTANLPDHAAINPEAEDSSSSSASTTDLANQKIRALIE--IKSLRLLQKQKDLREDMINGINQATKLNLVIDRAALKRPKKLFLRDARQTEQIERRQRLDREQKLKQKHLDHISSIQSHSNRFKSAHYESNEL-LTKFGKSVIKFHVEAEKEEQRRIERLSKERLKALRADDEEAYLKLIDTAKDTRITHLLRQTDQYLENLSVAVLQQQNDAVHRDGQIHVEQDQSTSMAIDESAFGAAPVFDDAAAATAQASTSAEGSKADYYNVAHRIKEEVTKQSSLLTGGQLKEYQVKGLQWMVSLYNNRLNGILADEMGLGKTIQTISLITWLMENKKQPGPYLVIVPLSTLPNWTLEFEKWAPTVKVVVYKGSPNIRKQLQNQ-IRQGAFEVLLTTYEYIIKDRPMLCKIKWVHMIIDEGHRMKN 527          
The following BLAST results are available for this feature:
BLAST of Gcaud3176.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6F5_9FLOR0.000e+086.38Chromatin structure-remodeling complex subunit snf... [more]
R7QQ29_CHOCR8.860e-25567.56Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3A431_9RHOD2.130e-12142.15Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2XAC2_GALSU2.280e-10638.18Chromatin remodeling complex SWI/SNF component, Sn... [more]
A0A5J4YP78_PORPP1.030e-10237.54Chromatin structure-remodeling complex subunit snf... [more]
M1VGM5_CYAM18.740e-8335.39Chromatin remodeling complex SWI/SNF component, Sn... [more]
A0A397VSI8_9GLOM1.650e-7638.42SNF2 family N-terminal domain-containing protein n... [more]
A0A7J7IEL1_9RHOD3.070e-7533.54SWI SNF, matrix associated, actin dependent regula... [more]
A0A1Y2F9P4_9FUNG6.150e-7438.52Uncharacterized protein n=1 Tax=Neocallimastix cal... [more]
A0A0L0VSA2_9BASI6.300e-7437.78Uncharacterized protein n=3 Tax=Puccinia striiform... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 126..149
NoneNo IPR availableCOILSCoilCoilcoord: 344..376
NoneNo IPR availableCOILSCoilCoilcoord: 278..308
NoneNo IPR availableGENE3D1.20.5.170coord: 305..381
e-value: 9.5E-7
score: 31.0
NoneNo IPR availablePANTHERPTHR10799SNF2/RAD54 HELICASE FAMILYcoord: 424..597
NoneNo IPR availablePANTHERPTHR10799SNF2/RAD54 HELICASE FAMILYcoord: 122..419
NoneNo IPR availablePANTHERPTHR10799:SF854ATP-DEPENDENT HELICASE BRMcoord: 424..597
NoneNo IPR availablePANTHERPTHR10799:SF854ATP-DEPENDENT HELICASE BRMcoord: 122..419
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 456..601
e-value: 7.7E-10
score: 48.7
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 472..601
score: 16.73361
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 427..600
e-value: 1.0E-58
score: 200.3
IPR000330SNF2, N-terminalPFAMPF00176SNF2-rel_domcoord: 463..597
e-value: 4.5E-31
score: 107.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 431..597

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_115_length_48887_cov_4.567628contigNODE_115_length_48887_cov_4.567628:43693..45572 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3176.t1Gcaud3176.t1Gracilaria caudata M_176_S67 malemRNANODE_115_length_48887_cov_4.567628 43693..45572 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3176.t1 ID=Gcaud3176.t1|Name=Gcaud3176.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=602bp
MASQQAVRLLEAHPHRAPLEAEQLRALCNLLYTLKRGLGSAAAAKTPVYN
AILRVLKAHTCPLPNTTVTFAQVQAARLQLLAEKLYREHKPFPQELNAAI
TQGLVSGFDPATGFRVPPETQNVQLARQQLQEQDEIMKERQRLQELQADF
HKSRASCVEAARAHEPELPTPEEMLPWEQRRIPIPRQGLQRGRHMGLDQN
TLVNERYRSLKVRTDAICSDIARILTDHGTGVKTLSPRNAALLETRIRHV
KLMSLQSRIRQSVWNEYQTGTLDGRRTSRAKVRTLKQLQREYERVERARH
RQVETEEKDARRKRQAWINAMADHLNKFRSYHRDTVKRGVRAVNKALLKY
HEELSKNASRAEREAEKARIQKLKDDDEEGYLELVKQTKNTRVLELLEQT
DKYLRELGAVVKEERARSGVVEYENNTAAKIGRRSNYYEIAHAIKEEVRT
QSSLLVGGTLKEYQLHGIQWMVSLYNNRLNGILADEMGLGKTVQTLGLIA
HLMERKDNPGPYLIIVPLSTVSNWEMEFARWAPVIRVVVFKGDARARKRL
YEEVIEKKSFNVCLVTYEYVVRGKNFLKRVEWQHIIIDEGHRIKNHEKLA
N*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR038718SNF2-like_sf
IPR000330SNF2_N
IPR027417P-loop_NTPase