Gcaud315.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud315.t1
Unique NameGcaud315.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length336
Homology
BLAST of Gcaud315.t1 vs. uniprot
Match: A0A2V3IGT8_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGT8_9FLOR)

HSP 1 Score: 394 bits (1011), Expect = 1.290e-132
Identity = 203/345 (58.84%), Postives = 249/345 (72.17%), Query Frame = 0
Query:    1 LQTCSANGFQCTLDSSITPACPNNEIAVEEVTLKPFRPVEFNLAFNLSEYMKDYIFLIDACNSTRPALDAVKEELIRFVQNVSSDYNVGVAIYGSESSFDARGFSVLQTVTSNGEDAVRALQHIPVLPDGPRSSVQALSILGGSRTVEGAIESLGFRSRNRAVVLIGDTPGREVPCDAPYFTDLRRSWGFRIQR-------IVVNIASPGLDAALPALHCDQYNIPEGQNPIREGQGS--SIAGEYIVHPPVTFDKLFQMYDEHRRYIPPRGYLPGWGRRVWITQNTTYRQFGYFQMPYPPPLSDGCNERVRMSIPSPWPELLKIPSEKDGKVRLEVEPLACRNG 336
            LQ C+ NGFQC +D SI+P CPNNEI VEEVTL P RPVEFNLAFNLSEY +D IFL DA  STR +LDA+K +LIRF++NVSS Y+VG+ +YGSE SF A G+SVLQTVT + E+AV+AL +IP+LPDGPR+S+ AL+ L G RTVEG I + GFRS+ R  +LIGDTPGREVPCDAP F+D+R      I R       +  +I SPGL+AA+ A  C+ + IPE  NPI+  Q S  SI G  ++  PVTFD L+  Y + R Y PPRGY P WGR V +TQNTT R FGYFQMP P P SDGCNERV +S P  WP  L+ P+++ G ++L + P ACRNG
Sbjct:   58 LQWCTRNGFQCAVDPSISPVCPNNEIPVEEVTLIPHRPVEFNLAFNLSEYTRDVIFLFDASTSTRSSLDALKNDLIRFIRNVSSTYSVGIGLYGSEQSFGAAGYSVLQTVTPHSEEAVQALHNIPMLPDGPRTSMLALATLIGLRTVEGGIPNFGFRSQERIFLLIGDTPGREVPCDAPSFSDIRHDI---INRRGPSNIILTASIGSPGLNAAISAPPCNYHTIPEALNPIQAEQASDISIRGGQVM-TPVTFDTLYTTYHQIRSY-PPRGYFPNWGRAVTVTQNTTSRGFGYFQMPVPIPQSDGCNERVILSTPVSWPVPLQFPTKEVGTIQLALAPWACRNG 397          
BLAST of Gcaud315.t1 vs. uniprot
Match: A0A2V3IME3_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME3_9FLOR)

HSP 1 Score: 165 bits (418), Expect = 6.180e-44
Identity = 117/344 (34.01%), Postives = 170/344 (49.42%), Query Frame = 0
Query:    2 QTCSANGFQCTLDSSITP--ACPNNEIAVEEVTLKPFRPVEFNLAFNLSEYMKDYIFLIDACNSTRPALDAVKEELIRFVQNVSSDYNVGVAIYGSESSFDARGFSVLQTVTSNGEDAVRALQHIPVLPDGPRSSVQALSILGGSRTVEGAIESLGFRSRNRAVVLIGDTPGREVPCDAPYFTDLRRSWGFRIQRIVVNIASPGLDAALPALHCDQYNIPEGQNPIREGQGSSIA----GEYIVHPPVTFDKLFQMYDEHRRYIPPRGYLPGWGRRVWITQNTTYRQFGYFQMPYPPPL---SDGCNERVRMSIPSPWPELLKIPSEKDGKVRLEVEPLACRNG 336
            + CS++ ++C L+ ++     CPN E+ V+ + L  F  V+FNLA NL  Y  D + LID  +STRP L A+K EL  FV+ ++    VGVA+YGSE S+D  G SVL  VT   + A+ AL+ IP   DG R+++ AL      +T+  ++  L  R   R +VLIGD PGRE  C   Y  D+       I    V++ S GL++ALPA            +PI  GQ   I     GE +    VT   L    D  RR  P   Y    G  + ++  +    F  ++ PY PP+   S+GC  +V +   S  P  +  P+E    V + +    C +G
Sbjct:   65 KKCSSSSYRCALNPAVEKDNPCPNGEVPVKSINLTSF--VDFNLAINLRGYSTDVVLLIDTSSSTRPHLKAIKNELSSFVRQLNGSAKVGVAVYGSEESYDESGLSVLSAVTDYVDPALEALESIPETVDGTRTTITAL------KTLSSSVAGLNLRGNKRIIVLIGDRPGREPDCRNGYNRDMVLPSSTMIS---VSLGSDGLNSALPAPSACMNGSYYDPSPIAVGQARDIVNRTNGEVV--EIVTAASLLWAVDTVRRR-PVYWYNRPPGSNIRVSSAS----FPLYRGPYTPPVQRYSNGCGNKVYLRT-SGLPAFISAPAEVTASVHVALPKGVCIHG 389          
BLAST of Gcaud315.t1 vs. uniprot
Match: A0A2V3IEV7_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEV7_9FLOR)

HSP 1 Score: 136 bits (342), Expect = 1.140e-33
Identity = 112/322 (34.78%), Postives = 158/322 (49.07%), Query Frame = 0
Query:   28 VEEVTLKPFRPVEFNLAFNLSEYMKDYIFLIDACNSTRPALDAVKEELIRFVQNVSSDYNVGVAIYGSESSFDARGFSVLQTVTSNGEDAVRALQHIPVLPDGPRSSVQAL-SILGGSRTVEGAIESLGFRSRNRAVVLIGDTPGREVPCDAPYFTDLRRSWGFRIQRIVVNIASPGLDAALPALHCDQYNIPEGQNPIREGQGSSIA----GEYIVHPPVTFDKLFQMYDEHRRYIPPRGYLPGWGRRVWITQNTTYRQFGYFQMPYPPPLS--------DGCNERVRMSIPSPWPELLKIPSEKDGKVRLEVEPLACRNG 336
            V  VTL+   P++ +L  N+    +D + L+DA  STR  L+ VKE+L  FV+ +    NV VA YG ES     G+SV    TS+   A  AL +IP++ DGPR+S+ A+ SI+   +  +G I  LG  +  R +VL+GDTPGRE  C     +D       R + +VVN+ASPGL+AALPA     Y        I EGQG+ +A    GE I    VT  KL +   + R  +     L G G  + +   T      Y    Y  P S         GC++RV +   S  P+    P +  GK+ L +    C+ G
Sbjct:    2 VNNVTLRHHFPIDISLDINVPGDTQDIVMLVDASQSTRAKLNNVKEQLKSFVRTLGDVGNVSVAFYGGESDMGETGYSVALKATSDVNRAAEALDNIPIVADGPRTSITAMWSIM---QHQDGTIP-LGLFANRRIIVLVGDTPGREPECRHGIKSDRMSFSSQRTRVMVVNLASPGLNAALPAPAACGYITSAA---IPEGQGTRLADTSEGELISQ--VTSSKLRESILKLR--MNAANGLHGKGSHISVLSKT------YTYTEYTCPSSFCARTITTKGCDDRVIIR-KSNIPDFAHGPVQMTGKISLSLPAGICQRG 305          
BLAST of Gcaud315.t1 vs. uniprot
Match: A0A2V3IGI2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGI2_9FLOR)

HSP 1 Score: 123 bits (308), Expect = 3.200e-28
Identity = 76/215 (35.35%), Postives = 116/215 (53.95%), Query Frame = 0
Query:    4 CSANGFQCTLDSSITP--ACPNNEIAVEEVTLKPFRPVEFNLAFNLSEYMKDYIFLIDACNSTRPALDAVKEELIRFVQNVSS-DYNVGVAIYGSESSFDARGFSVLQTVTSNGEDAVRAL---QHIPVLPDGPRSSVQALSILGGSRTVEGAIESLGFRSRNRAVVLIGDTPGREVPCDAPYFTDLR---RSWGFRIQRIVVNIASPGLDAALP 209
            C    F C+L   I    +CPN E+ V  V +   RP   +L  N+     D I L+DA +STR  + A+K +++ F++ +     N+ +++ G+E SFD RG SVLQ  T+N  +AV++L   + +P +PDGPR+S++ L        +     ++GFRS  + VVL+GDT GRE  C    F       R  G +   + V+I  PGL+A LP
Sbjct:   63 CGEESFACSLKREIAANNSCPNAELPVSTVRVNLNRPTFVSLGINVPRPTLDVILLLDAVSSTRERIIALKPQIVSFIRQLEDVAENIHISVSGTEESFDQRGTSVLQRTTNNFAEAVQSLDEFERLPPIPDGPRASLRFL--------LPSITNTVGFRSEQQIVVLVGDTSGREPTCVFDRFDRTSFPSRFSGGQFSVVAVSIGDPGLNAPLP 269          
The following BLAST results are available for this feature:
BLAST of Gcaud315.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IGT8_9FLOR1.290e-13258.84VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IME3_9FLOR6.180e-4434.01VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IEV7_9FLOR1.140e-3334.78VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IGI2_9FLOR3.200e-2835.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 53..201
score: 8.932077
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 46..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_3866_length_2844_cov_3.900109contigNODE_3866_length_2844_cov_3.900109:2..1009 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud315.t1Gcaud315.t1Gracilaria caudata M_176_S67 malemRNANODE_3866_length_2844_cov_3.900109 2..1009 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud315.t1 ID=Gcaud315.t1|Name=Gcaud315.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=336bp
LQTCSANGFQCTLDSSITPACPNNEIAVEEVTLKPFRPVEFNLAFNLSEY
MKDYIFLIDACNSTRPALDAVKEELIRFVQNVSSDYNVGVAIYGSESSFD
ARGFSVLQTVTSNGEDAVRALQHIPVLPDGPRSSVQALSILGGSRTVEGA
IESLGFRSRNRAVVLIGDTPGREVPCDAPYFTDLRRSWGFRIQRIVVNIA
SPGLDAALPALHCDQYNIPEGQNPIREGQGSSIAGEYIVHPPVTFDKLFQ
MYDEHRRYIPPRGYLPGWGRRVWITQNTTYRQFGYFQMPYPPPLSDGCNE
RVRMSIPSPWPELLKIPSEKDGKVRLEVEPLACRNG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR036465vWFA_dom_sf