Gcaud2950.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2950.t1 vs. uniprot
Match: A0A2V3IHS8_9FLOR (R-phycoerythrin gamma chain, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHS8_9FLOR) HSP 1 Score: 374 bits (960), Expect = 3.520e-128 Identity = 194/281 (69.04%), Postives = 225/281 (80.07%), Query Frame = 0
Query: 1 MFAFTTSTALTSARVATSGSSFTPSVTPVSPARKQHGAPTMALRQ-SLVKPIGLPVSSFGGAASILNKADEYMAKSVLNQYLKISQPAGVYGVQCTEGSVKGAAEVTRIRALNARFRASQAGPFKKFGDLYENRKNAIAADHICQYEESLFCSYPKMSRTYNLARSEANGTCIRYATPESVEEAAMMRYMDIQQNNAANPSGVYNSSCNEGAAKGQAEDIRVAALNVAYRNAQKPIGQVLNEKYQQKKYGYIQCHGCNYEEQLVSKYPAIGAAFRPKTYGY 280
MFAF S ++T+AR +SFT S+TP P R + +MALR S V+ + ++ A+ IL KA +YMA SVL QY I+ P G YGVQCTEGSVKGAAE R+RAL+ FRA Q GPFKK+ DLYENRKNAIAADHICQYEE+LF YP ++ TYN+AR+EANG C RYATPESVEEAAM+RYMDIQQNNAANPSGVYNSSCNEGAAKGQ+E +R+AALNVAYRNAQKP+ Q+L EKY+QKKYGY+QCHGCNYEE LVSK+PAIGAAFR KTYGY
Sbjct: 1 MFAFAPSVSVTAARTTLPSTSFTTSLTPHRPNR--NATTSMALRSPSSVRSVRSVAAA--RASDILAKAADYMANSVLYQYYNIANPTGEYGVQCTEGSVKGAAEAARVRALSTAFRARQVGPFKKYFDLYENRKNAIAADHICQYEETLFSRYPSVAATYNVARNEANGACSRYATPESVEEAAMLRYMDIQQNNAANPSGVYNSSCNEGAAKGQSEHLRIAALNVAYRNAQKPLAQILQEKYEQKKYGYVQCHGCNYEESLVSKFPAIGAAFRAKTYGY 277
BLAST of Gcaud2950.t1 vs. uniprot
Match: R7QDA3_CHOCR (Gamma 31 kDa subunit of phycoerythrin n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDA3_CHOCR) HSP 1 Score: 314 bits (805), Expect = 1.600e-104 Identity = 158/251 (62.95%), Postives = 190/251 (75.70%), Query Frame = 0
Query: 36 HGAPTMALRQSLVKPIGLP------VSSFGGAASILNKADEYMAKSVLNQYLKISQPAGVYGVQCTEGSVKGAAEVTRIRALNARFRASQAGPFKKFGDLYENRKNAIAADHICQYEESLFCSYPKMSRTYNLARSEANGTCIRYATPESVEEAAMMRYMDIQQNNAANPSGVYNSSCNEGAAKGQAEDIRVAALNVAYRNAQKPIGQVLNEKYQQKKYGYIQCHGCNYEEQLVSKYPAIGAAFRPKTYGY 280
H APTM LR SL KP+G S FGGAA+IL+KAD YMA+S+L QY K++ PAGVYGVQCTEG K A+ +RIRALNARFRA QA + + L+ENRK AI + H C +EE+ F Y ++ +YN++R+EA G+C RYATPE+VEEAA++R+MDIQQ AANPSGVYN +CNEGAAK QAED RVAALN AYRN QK G++L EKY Q+K GY HGCNYEE LV+ YPA+GA FRPKTYGY
Sbjct: 34 HTAPTMILRTSLRKPVGSSSAFVGMASGFGGAAAILSKADTYMAQSILMQYYKVANPAGVYGVQCTEGGSKHMADFSRIRALNARFRARQASKAQAYARLFENRKMAIVSSHECHHEETQFSQYANVAASYNVSRAEALGSCSRYATPETVEEAALLRFMDIQQTTAANPSGVYNVACNEGAAKFQAEDCRVAALNAAYRNGQKSAGKLLQEKYDQRKKGYAATHGCNYEEGLVNNYPALGATFRPKTYGY 284
BLAST of Gcaud2950.t1 vs. uniprot
Match: P92928_AGLNE (Gamma 31 kDa subunit of phycoerythrin n=1 Tax=Aglaothamnion neglectum TaxID=2765 RepID=P92928_AGLNE) HSP 1 Score: 299 bits (766), Expect = 1.160e-98 Identity = 166/283 (58.66%), Postives = 201/283 (71.02%), Query Frame = 0
Query: 1 MFAFTTSTALT-SARVATSGSSFTPSVTPVS--PARKQHGAPTMALRQSLVKPIGLPVSSFGGAASILNKADEYMAKSVLNQYLKISQPAGVYGVQCTEGSVKGAAEVTRIRALNARFRASQAGPFKKFGDLYENRKNAIAADHICQYEESLFCSYPKMSRTYNLARSEANGTCIRYATPESVEEAAMMRYMDIQQNNAANPSGVYNSSCNEGAAKGQAEDIRVAALNVAYRNAQKPIGQVLNEKYQQKKYGYIQCHGCNYEEQLVSKYPAIGAAFRPKTYGY 280
M AF STAL S + AT G+ TP TP++ A + APTM LR SL PI S +G +SI++KAD YMA+ V QYL ++ P G +GVQCTEGSVK AAEV R+R+L+A +R + P K D+YENRK AI A H C YEE F Y K++ TYN A+SEA GTC +YA+PE+VEEAAM+RYMDI QNN ANPSGVYN SCNEG+ +GQAEDIRVAALN YR AQK ++++EKYQQKK GY HGC YEE L+S Y AIGAAFRPK+Y +
Sbjct: 1 MAAFAPSTALVASTKPATIGA--TPFATPLANRSAAVKSSAPTMVLRTSLRAPIET-FSVYGTYSSIMSKADTYMAQCVKKQYLAMANPMGTFGVQCTEGSVKFAAEVARVRSLSADYRQKMSSPSKAAFDMYENRKAAIVAAHGCHYEEGYFVDYKKVTSTYNTAKSEAAGTCFKYASPETVEEAAMVRYMDITQNNFANPSGVYNMSCNEGSVRGQAEDIRVAALNAQYRQAQKSTNKLMDEKYQQKKAGYAAAHGCTYEEGLISTYAAIGAAFRPKSYHF 280
BLAST of Gcaud2950.t1 vs. uniprot
Match: A0A291FEC5_GRIPA (LR gamma5 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID=A0A291FEC5_GRIPA) HSP 1 Score: 299 bits (766), Expect = 1.370e-98 Identity = 161/286 (56.29%), Postives = 201/286 (70.28%), Query Frame = 0
Query: 1 MFAFTTSTALTSARVATSGSSFTPSVTPVSPARKQHGAPTMALRQSLVKPIGLPVSSF------GGAASILNKADEYMAKSVLNQYLKISQPAGVYGVQCTEGSVKGAAEVTRIRALNARFRASQAGPFKKFGDLYENRKNAIAADHICQYEESLFCSYPKMSRTYNLARSEANGTCIRYATPESVEEAAMMRYMDIQQNNAANPSGVYNSSCNEGAAKGQAEDIRVAALNVAYRNAQKPIGQVLNEKYQQKKYGYIQCHGCNYEEQLVSKYPAIGAAFRPKTYGY 280
M+AF +T T+++ +SFT S P + APTM LR L P+ ++ G + IL KADEYMAKSV QYL S P G +GVQCTEGSVK AA+ +RIRALNA FRA KK D+YENRKNAI+ H C +EE+ F Y +S YN+++SEA+G+C RYA+PE+V EAAM+R+MDIQ AANP+GVYN SCNEGAA+GQAED+RVAALN A+R QK +G++L+EKYQQKK GY HGCNYEE L++KYPA+GAAFR K+YGY
Sbjct: 1 MYAFAPNTPFTASKAVVGKTSFT-SPLPAQSESRPTAAPTMVLRTVLRSPVPSGAATVYGYVGRGNISVILAKADEYMAKSVRKQYLAKSNPYGTFGVQCTEGSVKFAADFSRIRALNAEFRAKLGSASKKTFDMYENRKNAISNSHGCHHEETQFVGYKGVSSMYNVSKSEASGSCSRYASPETVVEAAMLRFMDIQVKMAANPTGVYNISCNEGAARGQAEDVRVAALNAAFRQGQKSLGKLLDEKYQQKKQGYSFAHGCNYEEGLINKYPALGAAFRSKSYGY 285
BLAST of Gcaud2950.t1 vs. uniprot
Match: A0A5J4YX19_PORPP (R-phycoerythrin gamma chain, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YX19_PORPP) HSP 1 Score: 208 bits (530), Expect = 7.670e-63 Identity = 112/221 (50.68%), Postives = 139/221 (62.90%), Query Frame = 0
Query: 61 AASILNKADEYMAKSVLNQYLKISQPAGVYGVQCTEGSVKGAAEVTRIRALNARFRASQAGPFKKFGDLYENRKNAIAADHICQYEESLFCSYPKMSRTYNLARSEANGTCIRYATPESVEEAAMMRYMDIQQNNAANPSGVYNSSCNEGAAKGQAEDIRVAALNVAYRNAQKPIGQVLNEKYQQKKYGYIQ-CHGCNYEEQLVSKYPAIGAAFRPKTYGY 280
A IL KADE+ A+SV QY + P GVY +QCTEG+VKGAA R A++A FRA QA P K L+ENR++AI A H CQ+EE LF +PK+S Y + ++EA TC RY P+S+EE M +D Q A P GVY SSC EG AKGQAE RVAAL A+R+AQK + E+Y YG HGC+YEE + + YPA AA R K+Y Y
Sbjct: 70 AKKILEKADEFFARSVTMQYKAFACPNGVYDIQCTEGTVKGAAYEKRAMAVSAAFRAKQASPAAKARALFENRRHAIIASHECQHEEDLFVRFPKLSAAYMMGKTEAMRTCSRYVVPDSLEEEYMAASVDRQMKERACPGGVYASSCVEGNAKGQAEQARVAALATAFRSAQKSASKTTAERYSSAAYGRDHFAHGCSYEESVFNTYPATAAAMRSKSYNY 290
BLAST of Gcaud2950.t1 vs. uniprot
Match: A0A5J4YZM7_PORPP (R-phycoerythrin gamma chain, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZM7_PORPP) HSP 1 Score: 199 bits (507), Expect = 1.330e-59 Identity = 108/216 (50.00%), Postives = 131/216 (60.65%), Query Frame = 0
Query: 66 NKADEYMAKSVLNQYLKISQPAGVYGVQCTEGSVKGAAEVTRIRALNARFRASQAGPFKKFGDLYENRKNAIAADHICQYEESLFCSYPKMSRTYNLARSEANGTCIRYATPESVEEAAMMRYMDIQQNNAANPSGVYNSSCNEGAAKGQAEDIRVAALNVAYRNAQKPIGQVLNEKYQQKKYGYIQ-CHGCNYEEQLVSKYPAIGAAFRPKTYGY 280
NK DEYMA+SV QY + + GVYG QCTEG+VKGAAE +R AL+ +FR Q F K DL+E RK+AI A C YEE + +PK++ L ++E TC RY PESVEE M +D Q P GVY+ SC EG AKGQAE RV+AL AYR A K V E+Y YG + HGC+YEEQ +KYPA AA R +YGY
Sbjct: 58 NKVDEYMARSVQRQYKQAAVATGVYGTQCTEGTVKGAAEASRSAALSRQFRIKQRSAFSKAHDLFEFRKHAIIAAAGCSYEEKMVTRFPKLAAAMVLGQTEMMRTCSRYVVPESVEEEYMAASVDKQMKRRGAPGGVYSLSCAEGVAKGQAEIARVSALGAAYRAASKSASAVTAERYNSMAYGRVHFAHGCSYEEQQFNKYPAAAAAMRSDSYGY 273
BLAST of Gcaud2950.t1 vs. uniprot
Match: Q7XYZ7_GRIJA (Phycoerythrin 31 kDa gamma subunit (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XYZ7_GRIJA) HSP 1 Score: 191 bits (484), Expect = 5.640e-57 Identity = 109/211 (51.66%), Postives = 140/211 (66.35%), Query Frame = 0
Query: 10 LTSARVATSGSSFTPSVTPVSPARKQHGAPTMALRQSLVKPIGLPVSSFGG------AASILNKADEYMAKSVLNQYLKISQPAGVYGVQCTEGSVKGAAEVTRIRALNARFRASQAGPFKKFGDLYENRKNAIAADHICQYEESLFCSYPKMSRTYNLARSEANGTCIRYATPESVEEAAMMRYMDIQQNNAANPSGVYNSSCNEGAAKG 214
LT A+ A S+FT S P APTM LR +L P+ ++ G ASIL+KAD YMA SV QYL S P GV+ VQCTEGSVK AA+ +R+RALN +R KK D++E+RK+AIA H C +EE+ F +Y KM+ YN+++SEA G+C RYA+PE+V EAAM+R+MDIQ AANP+GVY+SSCNEGAA+G
Sbjct: 1 LTVAKPAVGSSAFT-SPLPAHTESAPSAAPTMVLRTTLRSPMSSGSATVFGYVGKANIASILSKADAYMAMSVRKQYLAKSNPFGVFNVQCTEGSVKFAADFSRVRALNLNYRTQAYSASKKTMDMFESRKSAIANSHGCHHEETQFVAYKKMTSMYNVSKSEALGSCSRYASPETVTEAAMLRFMDIQMKQAANPTGVYSSSCNEGAARG 210
BLAST of Gcaud2950.t1 vs. uniprot
Match: A0A7S0ZID6_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZID6_9RHOD) HSP 1 Score: 191 bits (486), Expect = 4.170e-56 Identity = 105/221 (47.51%), Postives = 135/221 (61.09%), Query Frame = 0
Query: 61 AASILNKADEYMAKSVLNQYLKISQPAGVYGVQCTEGSVKGAAEVTRIRALNARFRASQAGPFKKFGDLYENRKNAIAADHICQYEESLFCSYPKMSRTYNLARSEANGTCIRYATPESVEEAAMMRYMDIQQNNAANPSGVYNSSCNEGAAKGQAEDIRVAALNVAYRNAQKPIGQVLNEKYQQKKYGY-IQCHGCNYEEQLVSKYPAIGAAFRPKTYGY 280
A L+KADE+ A+SV QY + P G Y QCTEGSVKGAA R AL+A FR+ Q P +K + +E RK A+ A C +EE +F YPK+++ Y L +EA TC RYA PE++ E M +D P+GVY+SSC EG AKGQAE RVAAL AYR+A K Q EK+ KY + HGCN+EE++ +KYPA+ A R +YGY
Sbjct: 80 AGKTLDKADEFFARSVTMQYKAYAAPYGTYTPQCTEGSVKGAAFEKRAMALSAAFRSKQKSPGQKAFEKFEMRKMAVIAAAGCDHEEKMFLKYPKLAKAYVLGSAEAMRTCQRYAVPETIAEEYMAAALDKVNKMRGAPNGVYSSSCVEGNAKGQAEQARVAALATAYRSAMKSTSQFEAEKFASSKYARDMFAHGCNHEEKIFNKYPAVAAGMRSVSYGY 300
BLAST of Gcaud2950.t1 vs. uniprot
Match: A0A1X6PKI7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKI7_PORUM) HSP 1 Score: 183 bits (465), Expect = 3.220e-53 Identity = 110/275 (40.00%), Postives = 154/275 (56.00%), Query Frame = 0
Query: 3 AFTTSTALTSARVATSG---SSFTPSVTPVSPARKQHGAPTMALRQSLVKPIGLPVSSFGGAASILNKADEYMAKSVLNQYLKISQPAGVYGVQCTEGSVKGAAEVTRIRALNARFRASQAGPFKKFGDLYENRKNAIAADHICQYEESLFCSYPKMSRTYNLARSEANGTCIRYATPESVEEAAMMRYMDIQQNNAANPSGVYNSSCNEGAAKGQAEDIRVAALNVAYRNAQKPIGQVLNEKYQQKKYGYIQCHGCNYEEQLVSKYPAIGAAFR 274
AF ++ + +ARV G SSF + + A PTM L + K G + G A I +K+D+Y+A+++ QY +++ GVY VQCTEGSV G AE RI A FR Q P +K+GDLY R +I H C EE + + P+ + +Y + + EA C+RYATPES EE + + Q A P GV+ + C +G KGQAE++RVAALN +YR Q G + +KY Q +G Q +GCNYEE L + YPA A+F+
Sbjct: 2 AFVSAVPVGAARVTVYGAQKSSFVSTTPAPAAAAATPAGPTMLLAARVRKVSGGFSTKGGSYAQIASKSDKYLAQTINQQYKRVAAAGGVYNVQCTEGSVSGMAEYKRIAAKTRAFRDLQKTPSQKYGDLYAMRSASIQVAHGCHTEEKMLVNNPQAAASYVVGQREAMRQCVRYATPESTEENYIASKVQDQMLKAVAPYGVF-TRCTDGTVKGQAEEMRVAALNASYRTQQASAGTLAQQKYNQSAFGRSQANGCNYEECLCTTYPAAAASFQ 275
BLAST of Gcaud2950.t1 vs. uniprot
Match: A0A6T6C3B5_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6C3B5_9RHOD) HSP 1 Score: 160 bits (406), Expect = 3.080e-44 Identity = 90/215 (41.86%), Postives = 126/215 (58.60%), Query Frame = 0
Query: 68 ADEYMAKSVLNQYLKISQPAGVYGVQCTEGSVKGAAEVTRIRALNARFRASQAGPFKKFGDLYENRKNAI-AADHICQYEESLFCSYPKMSRTYNLARSEANGTCIRYATPESVEEAAMMRYMDIQQNNAANPSGVYNSSCNEGAAKGQAEDIRVAALNVAYRNAQKPIGQVLNEKYQQKKYGYIQC-HGCNYEEQLVSKYPAIGAAFRPKTYGY 280
AD + A++V ++ ++ GVY QCTEG+ KG A R A++ +FR Q +K GD +ENR+ AI HIC EE+L YP ++ +Y + ++EAN TC RY TP+SV EA M ++ Q P GVY SSC +G AKG+AE RVAA+N AYR K Q ++Y+ +G H C+YEE + +KYPA+ A R +Y Y
Sbjct: 79 ADAFFAQTVTRKFKEMVNWTGVYDPQCTEGTAKGEAWDKRELAVSKQFRFKQRSAAQKAGDFFENRRLAIHMVGHICAAEEALLGKYPTLAASYIMGKTEANKTCNRYTTPDSVAEAYMAASIESQNKKRGAPFGVYLSSCVDGNAKGRAEAARVAAVNTAYRAGWKSPAQNARQRYELSAHGRNMLGHDCDYEEAIYNKYPAVAGAMRSSSYRY 293 The following BLAST results are available for this feature:
BLAST of Gcaud2950.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2950.t1 ID=Gcaud2950.t1|Name=Gcaud2950.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=281bpback to top |