Gcaud2860.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2860.t1
Unique NameGcaud2860.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length404
Homology
BLAST of Gcaud2860.t1 vs. uniprot
Match: A0A2V3IXF3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXF3_9FLOR)

HSP 1 Score: 468 bits (1205), Expect = 2.890e-161
Identity = 212/341 (62.17%), Postives = 275/341 (80.65%), Query Frame = 0
Query:   57 SYAKMDPRIDPCAGRPTPHPVPSNLSRPPSLFFLHIPKTAGTLVYNIAIQYANKTKGLACQFLFDGNRYSCDQYHPSFTPVSGFPTNSLEEQAVKAWKDKDMELKTDLYEKGACRSIRGHVTYTLHDVIKNPVVSMTIMRHPLERLVSMFEFALMMIDTQPNQSGWDSWLSGVPLERELANVSSILNRGFYDANGEWIAKDNIGFSFHFYGVLHQLSGIRPIFRDIGKPKSFRMANAKEMSQKAKDNLCSTHILGLQNNMNATLNAIFDYLLPYAQWTSKEKETAKHAIVNRNNRKRGSRFRDYIPTPALRELERRLGHEIEVYHFAEAIVAHRQWVKGNK 397
            S   ++P  DPC GRP+P P+P++LSRPP+LFFLHIPKTAGTLVYN+ +QYANKTKGL CQFLFDGNRY+  +Y PSF     F  NS+EE+  +AWK+ D++ K  LY++GACRS+RGHVTY L D I +PVVSMT++R PLER +SMFEFALMM+ T+PN SGWDSW+SG  ++REL N SSILNRGFYD +G W+ KDN+GFSFHFYGVLHQLSGI+PIFR +G+PK+FR+ NAKEM++KAK+NLCSTHILG Q N++  L+ +F+Y++PYA+WT++EK   +H+  N+N+ KR S+  + +P    RE+ERRL HEIEVY FAE ++A+RQW++  K
Sbjct:   73 SRTAVEPARDPCNGRPSPPPIPNSLSRPPTLFFLHIPKTAGTLVYNVVLQYANKTKGLPCQFLFDGNRYTLHKYEPSFKTSHHFSLNSIEEKGFRAWKENDVKQKEMLYKRGACRSLRGHVTYALRDEIDSPVVSMTVLRDPLERFMSMFEFALMMVKTRPNTSGWDSWMSGASVQRELTNASSILNRGFYDDDGNWMEKDNVGFSFHFYGVLHQLSGIQPIFRGVGEPKAFRIINAKEMAEKAKNNLCSTHILGSQKNISRALDTLFEYMVPYARWTNREKNETRHSHANQNSHKRRSQLAENLPLSTRREIERRLKHEIEVYRFAENVIAYRQWLRSMK 413          
BLAST of Gcaud2860.t1 vs. uniprot
Match: A0A2V3J5J3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5J3_9FLOR)

HSP 1 Score: 286 bits (731), Expect = 4.270e-90
Identity = 146/331 (44.11%), Postives = 208/331 (62.84%), Query Frame = 0
Query:   66 DPCAGRPTPHPVPSNLSRPPSLFFLHIPKTAGTLVYNIAIQYANKTKGLACQFLFDGNRYSCDQYHPSFTPVSG-FPTNSLEEQAVKAWKDKDMELKTDLYEKGACRSIRGHVTYTLHDVIKNPVVSMTIMRHPLERLVSMFEFALMMIDTQPNQSGWDSWLSGVPLERELANVSSILNRGFYDANGEWIAKDNIGFSFHFYGVLHQLSGIRPIFRDIGKPKSFRMANAKEMSQKAKDNLCSTHILGLQNNMNATLNAIFDYLLPYAQWTSKEKETAKHAIVNRNNRKRGSRFRDYIPTPALRELERRLGHEIEVYHFAEAIVAHRQWVKG 395
            +PCA   TP P P   +RPPS+FFLHIPKTAGTL++++  ++A K++GL C + FDGNR     +  +  P +  F  +SL+ + + A+K +D + +  LY +GACR +RGHVT ++    + P   +TIMR PL R VSM+EFA  M+ ++P  +GWD WL    L  EL N SS+ +RGFYD  GEW AK N+GFSFHFYGVLHQLSG+ P F   G    FR+ NA  M++ AK  LC+TH++GLQ+ +   L+ + D   P+AQWT  E+     ++VN+   ++  +  D++     R +  RL HEI+VY FA  +V +R  VK 
Sbjct:   53 NPCAAYATPFPQPP--TRPPSVFFLHIPKTAGTLLFSLLQRFAVKSRGLTCSYAFDGNRNPFHHFAVANPPQNTTFEHDSLQHRLLTAYKTRDFKQRATLYAQGACRVVRGHVTASMLAPFETPPYIVTIMRDPLARFVSMYEFARTMMKSRPVVTGWDPWLQADSLLDELNNASSLFHRGFYDEFGEWRAKKNVGFSFHFYGVLHQLSGMTPRFEHEGDKDRFRIVNADVMAETAKRQLCATHLVGLQHQVQDVLDTVMDVTEPFAQWTPAERSQYLKSVVNKTPGRKSRKVEDHLDAHWQRVISERLRHEIDVYEFAVRLVEYRSTVKA 381          
BLAST of Gcaud2860.t1 vs. uniprot
Match: A0A2V3IU09_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU09_9FLOR)

HSP 1 Score: 137 bits (346), Expect = 6.930e-35
Identity = 70/169 (41.42%), Postives = 96/169 (56.80%), Query Frame = 0
Query:  215 TQPNQSGWDSWLSGVPLERELANVSSILNRGFYDANGEWIAKDNIGFSFHFYGVLHQLSGIRPIFRDIGKPKSFRMANAKEMSQKAKDNLCSTHILGLQNNMNATLNAIFDYLLPYAQWTSKEKETAKHAIVNRNNRKRGSRFRDYIPTPALRELERRLGHEIEVYHFA 383
            ++P  +GWD WL    L  EL N SS+ +RGFYD  G+W  K N GFSFHFYGVL QLSGI P F   G    FR+ANA  M+  AK  LC+TH++GL   +   L+++ +    +A WT  E+      ++N+   +      D++     R +  RL HEI+VY FA
Sbjct:    3 SRPIATGWDPWLQADSLVDELNNPSSLFHRGFYDPYGQWREKRNEGFSFHFYGVLQQLSGITPRFEHEGGKDRFRIANAHVMAHAAKRQLCATHVVGLHYQVAHALDSVMNVTESFAHWTPAERSRYLRIVLNKTPGRSSRNVEDHLDAHWQRVISERLRHEIDVYGFA 171          
The following BLAST results are available for this feature:
BLAST of Gcaud2860.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IXF3_9FLOR2.890e-16162.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5J3_9FLOR4.270e-9044.11Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IU09_9FLOR6.930e-3541.42Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005331SulfotransferasePFAMPF03567Sulfotransfer_2coord: 85..207
e-value: 3.5E-5
score: 24.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 84..400
e-value: 2.2E-27
score: 98.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 81..229
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..403
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..24
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_7_length_102599_cov_4.541909contigNODE_7_length_102599_cov_4.541909:92923..94134 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2860.t1Gcaud2860.t1Gracilaria caudata M_176_S67 malemRNANODE_7_length_102599_cov_4.541909 92923..94134 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2860.t1 ID=Gcaud2860.t1|Name=Gcaud2860.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=404bp
MAQTSRMKCVTWLLVQAMLFFALVHIFSIGSAAHPVTSITSVKRKPSSLP
ISSGDLSYAKMDPRIDPCAGRPTPHPVPSNLSRPPSLFFLHIPKTAGTLV
YNIAIQYANKTKGLACQFLFDGNRYSCDQYHPSFTPVSGFPTNSLEEQAV
KAWKDKDMELKTDLYEKGACRSIRGHVTYTLHDVIKNPVVSMTIMRHPLE
RLVSMFEFALMMIDTQPNQSGWDSWLSGVPLERELANVSSILNRGFYDAN
GEWIAKDNIGFSFHFYGVLHQLSGIRPIFRDIGKPKSFRMANAKEMSQKA
KDNLCSTHILGLQNNMNATLNAIFDYLLPYAQWTSKEKETAKHAIVNRNN
RKRGSRFRDYIPTPALRELERRLGHEIEVYHFAEAIVAHRQWVKGNKLMK
TSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005331Sulfotransferase
IPR027417P-loop_NTPase