Gcaud2827.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2827.t1
Unique NameGcaud2827.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length417
Homology
BLAST of Gcaud2827.t1 vs. uniprot
Match: A0A2V3J3J4_9FLOR (Mitochondrial inner membrane protein OXA1L n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3J4_9FLOR)

HSP 1 Score: 512 bits (1319), Expect = 2.000e-178
Identity = 271/419 (64.68%), Postives = 333/419 (79.47%), Query Frame = 0
Query:    1 MNRVLLAHLSAKTLRRSAPSKLFPLYGNPRYLSTIPSAHSTTTSNFLSNVAYADEKTADH--RAARPDSSNSVDQIPSVTDQSQAVDIATLENVNAATDAVAATDAAITGAEVASSSFSLSDTLLQPAISLLNITHDATNLPWYLAIAASTVFIRTMLLPATIMTMKNSAKMQAIQPDIMEKREEVMQAIKTGNRPLANRKQQEMQDFMRNAGVAPAKVLIGPLVQLPVFISFFVSVRRLSQSDPTFVGGGVAWFTDLSVMDPTYVLPVVCGATLLGMTEFGADTGSTKMSPQMKNGMRIVAALSVPLTYWFPAAVFCYWIPNNVFSVVLGAAMRTKSIRKMVGIDVNPASIPGTRAAKERETKIAVLARKAGVSKEINVEQVLASYGKQPTALGDGTVAKPVLFKQKP-KKKMSVAAN 416
            MNRVL   LSA+ LR  +  +    +  PRYLST P A S +    +SN+AYA+E T  +       D  +S+D +P+  D  Q VD++T+++      A+A+TDAA   A+VASSSFSLSDTLLQP I+LLN+THD +N+PWY AIA ST+ IRT+LLPAT+MTM+NSAKMQAIQPDIMEKRE+VMQA+K GNR LA+ KQ EMQ FM+ AGVAPAKVLIGP+VQ PVFISFFVS+RRLSQS+P+ V GG AWFTDLSVMDPTYVLP+VC A+L GMTE G DTGSTKM+PQMK GMR +AALSVPLTYWFPAAVFCYWIPNN+FS+ LG+ MR K +R+ +G+D++PA IPGTRAAK R+ ++A+LARK GV+KE++V ++LASYGKQP +L DGT A PVL KQ+P KKKM+VAAN
Sbjct:    1 MNRVLFTRLSAQALRSYSYVRT-SAFRRPRYLSTTPYAASVSQRFNVSNIAYAEESTPKNVDGTVGSDLKSSLDNLPAAGDNPQIVDLSTVDS------AIASTDAATAVADVASSSFSLSDTLLQPTIALLNMTHDVSNMPWYFAIALSTIAIRTVLLPATLMTMRNSAKMQAIQPDIMEKREDVMQAVKVGNRALASEKQAEMQKFMKQAGVAPAKVLIGPVVQFPVFISFFVSIRRLSQSEPSMVDGGAAWFTDLSVMDPTYVLPIVCAASLFGMTELGGDTGSTKMTPQMKTGMRAIAALSVPLTYWFPAAVFCYWIPNNLFSIALGSLMRAKGMRRRLGLDMDPADIPGTRAAKARQAQMAMLARKTGVNKEVDVGKILASYGKQPGSLSDGTKATPVLLKQRPSKKKMNVAAN 412          
BLAST of Gcaud2827.t1 vs. uniprot
Match: R7Q3M2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3M2_CHOCR)

HSP 1 Score: 360 bits (925), Expect = 9.330e-119
Identity = 183/320 (57.19%), Postives = 244/320 (76.25%), Query Frame = 0
Query:  100 AATDAAITGAEVASSSFSL--------SDTLLQPAISLLNITHDATNLPWYLAIAASTVFIRTMLLPATIMTMKNSAKMQAIQPDIMEKREEVMQAIKTGNRPLANRKQQEMQDFMRNAGVAPAKVLIGPLVQLPVFISFFVSVRRLSQSDPTFVGGGVAWFTDLSVMDPTYVLPVVCGATLLGMTEFGADTGSTKMSPQMKNGMRIVAALSVPLTYWFPAAVFCYWIPNNVFSVVLGAAMRTKSIRKMVGIDVNPASIPGTRAAKERETKIAVLARKAGVSKEINVEQVLASYGKQPTALGDGTVAKPVLFKQKPKKKM 411
            AA+DAA +  +VA+S+ ++        SDTLLQPA++LL+  HD T LPW+LAI  ST+ IR++LLPAT+MTM+NSA+M A++PDI E+R  VM+A+++G+RPLA ++Q+EMQDFMRNAG  P KVL GPLVQ PVFISFFV ++RLSQSDPTF   G  WF DLS  DP +VLPVVCGA+LL MTE G DTGST+MS +M+ GMR +AALSVP+TYWFP AVFCYWIPNNVFS++LGAA+RTK  R+M+G++V+ + IPGT+AA+  E K+A   +     + ++    +ASY +  + + +    KPVL K++PKKK+
Sbjct:   85 AASDAAPSLTDVATSADAIAVEAVAPWSDTLLQPAVALLHTVHDVTGLPWWLAIGVSTIAIRSLLLPATLMTMRNSARMTALKPDIEERRNVVMEAVRSGDRPLAAKRQKEMQDFMRNAGATPLKVLAGPLVQFPVFISFFVGLKRLSQSDPTFATEGAMWFIDLSSKDPMFVLPVVCGASLLAMTELGGDTGSTQMSKEMRLGMRCIAALSVPMTYWFPTAVFCYWIPNNVFSIMLGAALRTKPTRQMLGLNVDVSKIPGTKAARALEAKLAAEGKGTLSPQILDPTLAVASYARSSSVVPNAQTVKPVLLKRRPKKKV 404          
BLAST of Gcaud2827.t1 vs. uniprot
Match: A0A7S1TD18_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD18_9RHOD)

HSP 1 Score: 188 bits (477), Expect = 9.520e-53
Identity = 102/280 (36.43%), Postives = 169/280 (60.36%), Query Frame = 0
Query:  127 ISLLNITHDATNLPWYLAIAASTVFIRTMLLPATIMTMKNSAKMQAIQPDIMEKREEVMQAIKTGNRPLANRKQQEMQDFMRNAGVAPAKVLIGPLVQLPVFISFFVSVRRLSQSDPTFVGGGVAWFTDLSVMDPTYVLPVVCGATLLGMTEFGADTGSTK---MSPQMKNGMRIVAALSVPLTYWFPAAVFCYWIPNNVFSVVLGAAMRTKSIRKMVGI-DVNPASIPGTRAAKE--RETKIAVLA----RKAGVSKEINVEQVLASYGKQPTALGDGT 396
            +SLL   H  +  PW+L IA +TV +R  L P  + TM+ SA +Q  +P + E + E+ + +  G    A  +Q ++  FMR  G++P + L GPL+Q PVF+SFF  +R+L +++ +   GG+AWFTDL+ +DPTYVLPV+  +T+  + E GA++G+ +   ++  MKN +R +  LS+P+T  FP A+ CYW+P+NV+S+V G  MR   +++ + + D   A++ G +A+ E  + T     A    +KAG S  +N  ++L    K+   +G+ T
Sbjct:   45 VSLLETVHTVSATPWWLTIAGTTVAVRLALSPVMVFTMRRSAAIQQAKPQMEEFQAEIKELMSLGQTEKAKAQQAKLMQFMREKGISPFQTLAGPLLQFPVFLSFFFGLRKLVENNTSLATGGLAWFTDLTTIDPTYVLPVLTASTMFLVMELGAESGANQSQTITGPMKNILRGLCVLSIPVTAQFPTALMCYWLPSNVYSLVFGGIMRLPVMKRKLKLNDPVKATLSGAQASVEIPKGTLTPQDALRSYQKAGDSSPVNATKLLTQRPKRKRQVGEAT 324          
BLAST of Gcaud2827.t1 vs. uniprot
Match: M2Y260_GALSU (Preprotein translocase, Oxa1 family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y260_GALSU)

HSP 1 Score: 182 bits (461), Expect = 1.990e-49
Identity = 101/290 (34.83%), Postives = 157/290 (54.14%), Query Frame = 0
Query:  124 QPAISLLNITHDATNLPWYLAIAASTVFIRTMLLPATIMTMKNSAKMQAIQPDIMEKREEVMQAIKTGNRPLANRKQQEMQDFMRNAGVAPAKVLIGPLVQLPVFISFFVSVRRLSQSDPTFVGGGVAWFTDLSVMDPTYVLPVVCGATLLGMTEFGADTGSTKMSPQMKNGMRIVAALSVPLTYWFPAAVFCYWIPNNVFSVVLGAAMRTKSIRKMVGIDVNPASIPGTR---AAKERETKIAVLARKAGVSKEINVEQVL----ASYGKQPTALGDGTVAKPVLFKQK 406
             P + L++  H+AT  PW+  +A  T  IR M+LP T+ +++ SA + ++QP + + ++++ +A + GN        ++  + +R     P K L  PL Q PVFI+FF S+R+LSQ +PTF  GG  WFTDLS  DP Y+LPV C + LL   +FG +T ST  S    N MR++A   +P TY  P+A+FCYW+PNN+FS+      +  ++RK++ +         T+   A ++ +T    L  +AG   E      L    A  G  P  +      KP L ++K
Sbjct:  119 DPMVYLIHRLHEATGWPWFALLAGMTWSIRLMMLPLTLGSLRTSALLNSLQPQLKDIQDKISRAKERGNSEKVEEYNKKYMEILRVNKANPMKALFAPLAQTPVFIAFFFSLRKLSQIEPTFSSGGTLWFTDLSAPDPYYILPVACSSILLTTLQFGGETASTATSRTAFNMMRLMALSIIPFTYQMPSALFCYWVPNNLFSLAQTLLFKVPTVRKVLKLPDKRKKGDSTKDSHAKQDEQTTFDHLYSQAGSKAEREALAALSYNSAREGTNPILVAAKQGMKPRLLEKK 408          
BLAST of Gcaud2827.t1 vs. uniprot
Match: M1V6L4_CYAM1 (Similar to mitochondrial inner membrane protein OXA1 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V6L4_CYAM1)

HSP 1 Score: 177 bits (448), Expect = 2.080e-47
Identity = 94/251 (37.45%), Postives = 158/251 (62.95%), Query Frame = 0
Query:   95 ATDAVAATDAAIT--GAEVASSSFSLSDTLLQPAISLLNITHDATNLPWYLAIAASTVFIRTMLLPATIMTMKNSAKMQAIQPDIMEKREEVMQAIKTGNRPLANRKQQEMQDFMRNAGVAPAKVLIGPLVQLPVFISFFVSVRRLSQSDPTFV-GGGVAWFTDLSVMDPTYVLPVVCGATLLGMTEFGADTGSTKMSPQMKNGMRIVAALSVPLTYWFPAAVFCYWIPNNVFSVVLGAAMRTKSIRKMVG 342
            A D  A+++AA T   +E A ++ S       P +  + +  + T+LPW+  +AA TV  R ++LP T+ T +N+A+MQ+I+PD+   +E +  A+ +G++      QQ++   +R   ++P + L+ PLVQ+P+FISFF+ +R++++  P  +  GG+ WF DLS+ DP Y LP +  AT+L M + G +TG  ++ P   N MRI A + +PLT  FPA +FCYW+PNN+FS++   A+R + +R+ +G
Sbjct:  114 ADDLRASSNAASTDLASEAAEAALSAERNWYDPVVQGIIMFQEYTDLPWWATVAAVTVLARILVLPLTLNTFRNAARMQSIKPDVDAIKERMQAAMHSGDQQRIRALQQQVFRLLRENQISPLRSLVNPLVQMPLFISFFLGLRKIAKIYPDELRNGGLGWFRDLSLPDPFYGLPALTSATMLFMIQMGTETGGAQLPPFALNLMRIFALILLPLTAQFPAILFCYWLPNNLFSMLQAFALRHQRVRRWLG 364          
BLAST of Gcaud2827.t1 vs. uniprot
Match: A0A7J7IHB4_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IHB4_9RHOD)

HSP 1 Score: 172 bits (437), Expect = 4.630e-46
Identity = 86/220 (39.09%), Postives = 141/220 (64.09%), Query Frame = 0
Query:  124 QPAISLLNITHDATNLPWYLAIAASTVFIRTMLLPATIMTMKNSAKMQAIQPDIMEKREEVMQAIKTGNRPLANRKQQEMQDFMRNAGVAPAKVLIGPLVQLPVFISFFVSVRRLSQSDPTFVG-GGVAWFTDLSVMDPTYVLPVVCGATLLGMTEFGADTGSTKMSPQMKNGMRIVAALSVPLTYWFPAAVFCYWIPNNVFSVVLGAAMRTKSIRKMVG 342
             P +  + + H+ T LPW+  +AA+T   R ++LP T+ T +NSA+MQ+I+PD+   +E +  A++TG++  +   QQE+   +R   ++P + L+ PLVQ+P+FI+FF ++R++++  P  +  GG+AWF DL+  DP Y LP +  AT+L M + GA+TG  ++     N MR+ A   VPLT  FPA +FCYW+P+N FSV+     R + +R+ +G
Sbjct:  119 DPVVQGIIMLHECTGLPWWATVAAATALARLLVLPLTLNTFQNSARMQSIKPDLDAIKERMQIALQTGDQHRSRSAQQEIFRLLRENRISPFRSLVNPLVQMPLFIAFFFALRKMARIYPDELKQGGLAWFRDLAAPDPFYGLPALTSATMLIMIQIGAETGGGQLPKVALNMMRVFALGLVPLTAHFPAILFCYWLPSNFFSVLQAYFFRFQHVRRWLG 338          
BLAST of Gcaud2827.t1 vs. uniprot
Match: A0A6A3UNJ7_9STRA (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UNJ7_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.630e-42
Identity = 88/237 (37.13%), Postives = 138/237 (58.23%), Query Frame = 0
Query:  109 AEVASSSFSLSDTLLQPAISLLNITHDATNLPWYLAIAASTVFIRTMLLPATIMTMKNSAKMQAIQPDIMEKREEVMQAIKTGNRPLANRKQQEMQDFMRNAGVAPAKVLIGPLVQLPVFISFFVSVRRLSQSDPTFVGGGVAWFTDLSVMDPTYVLPVVCGATLLGMTEFGADTGSTKMSPQMKNGMRIVAALSVPLTYWFPAAVFCYWIPNNVFSVVLGAAMRTKSIRKMVGIDV 345
            A V+   F LSD     AI  L++ H  T LPW+  I A+TV +RT+  P T+++M+N+AKM+  QPD MEK +  + +  T N   A   Q++ +  M+  GV P K ++ P+ Q+PVF+ FF  ++ +S+  P +   G+ W +DLS  DP  VLP++  A ++   E G D  + +M  ++K GMR  AA+ VPLT  F + +F YW+ +N F+V   A +R   I++ + I V
Sbjct:   91 ASVSDLGFGLSDL----AIRSLDVIHSTTGLPWWATIIATTVAVRTVFFPITVVSMRNAAKMKLFQPD-MEKLKAEIDSNPTQNSETAQEFQKKYKALMKKHGVNPFKSVLTPMSQIPVFLGFFWGLQDISKYFPEYAHEGIGWVSDLSAADPYMVLPILSSALMIASVELGGDAMAGEMKDKLKFGMRFFAAIMVPLTMNFQSGIFVYWVTSNAFTVAQSALLRVNLIKRALNIPV 322          
BLAST of Gcaud2827.t1 vs. uniprot
Match: A0A1Y1ICP8_KLENI (Cytochrome oxidase biogenesis protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ICP8_KLENI)

HSP 1 Score: 161 bits (408), Expect = 6.330e-42
Identity = 81/217 (37.33%), Postives = 130/217 (59.91%), Query Frame = 0
Query:  129 LLNITHDATNLPWYLAIAASTVFIRTMLLPATIMTMKNSAKMQAIQPDIMEKREEVMQAIKTGNRPLANRKQQEMQDFMRNAGVAPAKVLIGPLVQLPVFISFFVSVRRLSQSDPTFVGGGVAWFTDLSVMDPTYVLPVVCGATLLGMTEFGADTG--STKMSPQMKNGMRIVAALSVPLTYWFPAAVFCYWIPNNVFSVVLGAAMRTKSIRKMVGI 343
            +L   H  T LPW+  IAA+T+  R  L P T+  M+++A+M A +P++    +++ + +   +       Q++M + M+   V P K + G   Q P+FI FF+++RR+S++ P+F  GG+ WFTDLS  DPTY+LP +C AT L   E GA  G     M+  MK  MR++    VPLT  F  A+FCYWIP+N+FS++  + ++   +++ +GI
Sbjct:  134 MLEAMHQYTGLPWWATIAATTLTARACLFPITLFQMRSTARMSAARPELEVLSKKMRENVT--DHQATQEIQRQMSEVMKKYNVNPLKTMAGAFAQAPLFIGFFLAIRRMSENLPSFKEGGLFWFTDLSGADPTYLLPTICAATFLITVEVGAMEGMQGQPMAKTMKMAMRVLGVAMVPLTMSFEKALFCYWIPSNLFSLLQSSLLKVPKVKEALGI 348          
BLAST of Gcaud2827.t1 vs. uniprot
Match: A0A8H7PDQ1_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PDQ1_MORIS)

HSP 1 Score: 160 bits (404), Expect = 2.390e-41
Identity = 89/233 (38.20%), Postives = 144/233 (61.80%), Query Frame = 0
Query:  123 LQPAISLLNITHDATNLPWYLAIAASTVFIRTMLLPATIMTMKNSAKMQAIQPDIMEKREEVMQAIKTGNRPLANRKQQEMQDFMRNAGVAPAKVLIGPLVQLPVFISFFVSVRRLSQSD-PTFVGGGVAWFTDLSVMDPTYVLPVVCGATLLGMTEFGADTGSTKMSPQ---MKNGMRIVAALSVPLTYWFPAAVFCYWIPNNVFSVVLGAAMRTKSIRKMVGID--VNPAS 349
            L+ A+  +++T   T LPW+ AIAA+TV IRT++LP  +   +N+A++  I PD+      V +A K+G++    +  Q+ Q   ++    PAK L+ P+ Q PV ISFF+++R +++   P F+ GG+AWFTDLSV DP YVLP++  A +L + E G++TG+   +PQ   MK   R +  L +P T W P++VF YW+ NN+F++    A++  ++R  + I   V PA+
Sbjct:  119 LEAALEAIHVT---TGLPWWAAIAATTVAIRTLMLPLMVKVQRNNARVANINPDLQRIMNNVNEAKKSGDQMAIAKYSQQAQQLFKDNECHPAKSLLLPVFQAPVMISFFMALRGMAELPVPGFLDGGLAWFTDLSVKDPYYVLPILSSAGMLAILETGSETGAA--NPQAAGMKKFFRGMTILMIPFTAWMPSSVFVYWVTNNMFTLGQFMALKAPAVRSALNIPKLVKPAA 346          
BLAST of Gcaud2827.t1 vs. uniprot
Match: A0A0W8CDK3_PHYNI (Mitochondrial inner membrane protein OXA1 n=6 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CDK3_PHYNI)

HSP 1 Score: 158 bits (399), Expect = 6.990e-41
Identity = 85/242 (35.12%), Postives = 139/242 (57.44%), Query Frame = 0
Query:  109 AEVASSSFSLSDTLLQPAISLLNITHDATNLPWYLAIAASTVFIRTMLLPATIMTMKNSAKMQAIQPDIMEKREEVMQAIKTGNRPLANRKQQEMQDFMRNAGVAPAKVLIGPLVQLPVFISFFVSVRRLSQSDPTFVGGGVAWFTDLSVMDPTYVLPVVCGATLLGMTEFGADTGSTKMSPQMKNGMRIVAALSVPLTYWFPAAVFCYWIPNNVFSVVLGAAMRTKSIRKMVGIDVNPASI 350
            A V+   +SLSD     AI  L++ H  T LPW+  I A+TV +RT+  P T+++M+N+AKM+  QP++++ +++ M +  T +   A   Q++ +  M+   V P K ++ PL Q+PVF+ FF  ++ +S+  P +   G+ W  DLS  DPT  LPV+  A ++   E G D  +  M  +MK GMR  A L VPLT  F + +F YW+ +N+F++   A MR   +++ + I V    +
Sbjct:   88 ASVSDLGYSLSDM----AIRSLDVIHSTTGLPWWATIIATTVAVRTVFFPMTVISMRNAAKMKQFQPEMLKLKDQ-MDSNPTRDAESAQEFQKKYKALMKKHDVNPLKSMLTPLSQIPVFLGFFWGLQDISKYFPEYAHEGIGWVPDLSAADPTMALPVISSALMVASVELGGDAMADDMKDKMKFGMRCFALLMVPLTMKFQSGIFVYWVTSNMFTLTQTALMRLNVVKRALNIPVTDVQL 324          
The following BLAST results are available for this feature:
BLAST of Gcaud2827.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3J4_9FLOR2.000e-17864.68Mitochondrial inner membrane protein OXA1L n=1 Tax... [more]
R7Q3M2_CHOCR9.330e-11957.19Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1TD18_9RHOD9.520e-5336.43Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
M2Y260_GALSU1.990e-4934.83Preprotein translocase, Oxa1 family n=1 Tax=Galdie... [more]
M1V6L4_CYAM12.080e-4737.45Similar to mitochondrial inner membrane protein OX... [more]
A0A7J7IHB4_9RHOD4.630e-4639.09Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A6A3UNJ7_9STRA1.630e-4237.13Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
A0A1Y1ICP8_KLENI6.330e-4237.33Cytochrome oxidase biogenesis protein n=1 Tax=Kleb... [more]
A0A8H7PDQ1_MORIS2.390e-4138.20Uncharacterized protein n=1 Tax=Mortierella isabel... [more]
A0A0W8CDK3_PHYNI6.990e-4135.12Mitochondrial inner membrane protein OXA1 n=6 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001708Membrane insertase YidC/ALB3/OXA1/COX18PFAMPF0209660KD_IMPcoord: 141..327
e-value: 3.7E-26
score: 92.0
IPR001708Membrane insertase YidC/ALB3/OXA1/COX18PANTHERPTHR12428OXA1coord: 51..370
IPR028055Membrane insertase YidC/Oxa1, C-terminalTIGRFAMTIGR03592TIGR03592coord: 141..327
e-value: 3.1E-28
score: 97.1
NoneNo IPR availablePANTHERPTHR12428:SF34MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1Lcoord: 51..370
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 236..307
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 162..216
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..138
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 217..235
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 332..416
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 308..331
NoneNo IPR availableTMHMMTMhelixcoord: 213..235
NoneNo IPR availableTMHMMTMhelixcoord: 308..330
NoneNo IPR availableTMHMMTMhelixcoord: 139..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_7_length_102599_cov_4.541909contigNODE_7_length_102599_cov_4.541909:14376..15626 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2827.t1Gcaud2827.t1Gracilaria caudata M_176_S67 malemRNANODE_7_length_102599_cov_4.541909 14376..15626 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2827.t1 ID=Gcaud2827.t1|Name=Gcaud2827.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=417bp
MNRVLLAHLSAKTLRRSAPSKLFPLYGNPRYLSTIPSAHSTTTSNFLSNV
AYADEKTADHRAARPDSSNSVDQIPSVTDQSQAVDIATLENVNAATDAVA
ATDAAITGAEVASSSFSLSDTLLQPAISLLNITHDATNLPWYLAIAASTV
FIRTMLLPATIMTMKNSAKMQAIQPDIMEKREEVMQAIKTGNRPLANRKQ
QEMQDFMRNAGVAPAKVLIGPLVQLPVFISFFVSVRRLSQSDPTFVGGGV
AWFTDLSVMDPTYVLPVVCGATLLGMTEFGADTGSTKMSPQMKNGMRIVA
ALSVPLTYWFPAAVFCYWIPNNVFSVVLGAAMRTKSIRKMVGIDVNPASI
PGTRAAKERETKIAVLARKAGVSKEINVEQVLASYGKQPTALGDGTVAKP
VLFKQKPKKKMSVAAN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001708YidC/ALB3/OXA1/COX18
IPR028055Membr_insert_YidC/Oxa1_C