Gcaud2735.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2735.t1
Unique NameGcaud2735.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length204
Homology
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BLAST of Gcaud2735.t1 vs. uniprot
Match: A0A2V3IDP1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDP1_9FLOR)

HSP 1 Score: 172 bits (437), Expect = 3.770e-51
Identity = 79/202 (39.11%), Postives = 117/202 (57.92%), Query Frame = 0 
Query:    1 MVASLNILGLFSLLFVCLSFIGSAEAKLFPKVLGADRPFYRTAYKSSLV-RIPEEFCADAIRSEECKKCSECDLSKDDCTKLFASDTCWPAPTEAKCDLCFSAYGDTIFPKRLFTKSSVFTGFKSFGRVSQRKAFFSHIVDPGYCDFLKGTGICEPCSKCMGEGSSFSKCQIMFKTETCWPVPKEESCYKCFEEFGPEVFPE 201
            MVAS N L    +LF     + S EA       GA RP + +AY +    R+PE +CA+AI+S+EC+ C+EC++ +  C  LF +DTCWP P E  C  C+  +G +IFPKR+ T +     +KS+    +R+   +  VDP  CD L    +C  C  CMG+GS +  C+  F+T+ CWP P+   C++CF+EFG  + P+
Sbjct:    1 MVASANSLSTCKVLFALSCCLVSCEASFLSGRFGASRPLFGSAYLAPFRGRVPEAYCAEAIKSKECELCAECNVDEGKCVDLFKTDTCWPGPNEEVCLRCYDEFGASIFPKRVLTNARTKMAYKSY----RRRTGSARFVDPAMCDTLNSAMVCTDCETCMGDGSKYGNCKAYFQTDKCWPAPQSPECFECFDEFGSSILPD 198
The following BLAST results are available for this feature:
BLAST of Gcaud2735.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IDP1_9FLOR3.770e-5139.11Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..203
NoneNo IPR availableTMHMMTMhelixcoord: 2..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_835_length_17303_cov_4.798745contigNODE_835_length_17303_cov_4.798745:9356..9967 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2735.t1Gcaud2735.t1Gracilaria caudata M_176_S67 malemRNANODE_835_length_17303_cov_4.798745 9356..9967 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2735.t1 ID=Gcaud2735.t1|Name=Gcaud2735.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=204bp
MVASLNILGLFSLLFVCLSFIGSAEAKLFPKVLGADRPFYRTAYKSSLVR
IPEEFCADAIRSEECKKCSECDLSKDDCTKLFASDTCWPAPTEAKCDLCF
SAYGDTIFPKRLFTKSSVFTGFKSFGRVSQRKAFFSHIVDPGYCDFLKGT
GICEPCSKCMGEGSSFSKCQIMFKTETCWPVPKEESCYKCFEEFGPEVFP
EGA*
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