Gcaud2609.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2609.t1
Unique NameGcaud2609.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length126
Homology
BLAST of Gcaud2609.t1 vs. uniprot
Match: R7QMQ2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMQ2_CHOCR)

HSP 1 Score: 197 bits (502), Expect = 1.350e-59
Identity = 91/122 (74.59%), Postives = 103/122 (84.43%), Query Frame = 0
Query:    2 DLEYLDPNIRSMLYGYAAFEVSDRAVGRRIAEDRKEELLKRYKENKGKTCRGSGVCAIRLACQELNLPAEASHMDGLPAFCAGWASEFMERKPGNQTPEHGLDHDEVEARFGSSNAWRYPHT 123
            ++E++DPN+RSMLYGYAAF VS RAVG+RIAEDRK ELL+RY    GKTCRGSGVCA RLAC  L +PAEASHMDGLPAF  GWASE+ME KPGNQ PEHG  HD+VE + GSSNAWRYPH+
Sbjct:  297 EVEHIDPNVRSMLYGYAAFAVSTRAVGKRIAEDRKVELLRRYTTESGKTCRGSGVCATRLACSILKIPAEASHMDGLPAFATGWASEYMEFKPGNQKPEHGESHDDVEMKHGSSNAWRYPHS 418          
BLAST of Gcaud2609.t1 vs. uniprot
Match: A0A1X6PDH2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PDH2_PORUM)

HSP 1 Score: 152 bits (385), Expect = 3.970e-43
Identity = 72/112 (64.29%), Postives = 83/112 (74.11%), Query Frame = 0
Query:   10 IRSMLYGYAAFEVSDRAVGRRIAEDRKEELLKRYKENKGKTCRGSGVCAIRLACQELNLPAEASHMDGLPAFCAGWASEFMERKPGNQTPEHGLDHDEVEARFGSSNAWRYP 121
            +RS L  Y +F VS RA+GRRIA  R+ ELL+RY  N+G+TCRGSGV AIR  C  L LP  ASHMDGLPAF AGW  E+MER+PGNQ P +G DH+EVE R GS  AWRYP
Sbjct:  204 VRSTLVAYTSFAVSTRAIGRRIAPARQVELLRRYATNRGRTCRGSGVDAIRRGCAVLGLPGAASHMDGLPAFTAGWCLEYMERQPGNQPPAYGADHEEVERRLGSGTAWRYP 315          
BLAST of Gcaud2609.t1 vs. uniprot
Match: A0A1X6PDL7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PDL7_PORUM)

HSP 1 Score: 152 bits (385), Expect = 9.410e-42
Identity = 72/112 (64.29%), Postives = 83/112 (74.11%), Query Frame = 0
Query:   10 IRSMLYGYAAFEVSDRAVGRRIAEDRKEELLKRYKENKGKTCRGSGVCAIRLACQELNLPAEASHMDGLPAFCAGWASEFMERKPGNQTPEHGLDHDEVEARFGSSNAWRYP 121
            +RS L  Y +F VS RA+GRRIA  R+ ELL+RY  N+G+TCRGSGV AIR  C  L LP  ASHMDGLPAF AGW  E+MER+PGNQ P +G DH+EVE R GS  AWRYP
Sbjct:  363 VRSTLVAYTSFAVSTRAIGRRIAPARQVELLRRYATNRGRTCRGSGVDAIRRGCAVLGLPGAASHMDGLPAFTAGWCLEYMERQPGNQPPAYGADHEEVERRLGSGTAWRYP 474          
BLAST of Gcaud2609.t1 vs. uniprot
Match: R7QFI2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFI2_CHOCR)

HSP 1 Score: 107 bits (268), Expect = 8.220e-25
Identity = 50/116 (43.10%), Postives = 75/116 (64.66%), Query Frame = 0
Query:    6 LDPNIRSMLYGYAAFEVSDRAVGRRIAEDRKEELLKRYKENKGKTCRGSGVCAIRLACQELNLPAEASHMDGLPAFCAGWASEFMERKPGNQTPEHGLDHDEVEARFGSSNAWRYP 121
            +D NIR+MLYGYA+F VSDRA+G +I + +++E+ +R+  N G T RG G+  +R AC+ L +P +   MDG  A    WA ++++ + G  T   G  H+E++   GSS AWRYP
Sbjct:  449 IDKNIRAMLYGYASFAVSDRAIGEKIKDLQQKEMSRRHVANLGVTFRGYGLDTVRRACKRLGIPRDVRFMDGPLALSVAWAMQYLDGECGLDTLTQGNTHEEIDRLLGSSTAWRYP 564          
BLAST of Gcaud2609.t1 vs. uniprot
Match: D7FHB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHB4_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 8.360e-19
Identity = 44/95 (46.32%), Postives = 58/95 (61.05%), Query Frame = 0
Query:    9 NIRSMLYGYAAFEVSDRAVGRRIAEDRKEELLKRYKENKGKTCRGSGVCAIRLACQELNLPAEASHMDGLPAFCAGWASEFMERKPGNQTPEHGL 103
            ++R +L G A+  +  R +  ++   R +EL  RY  NKGKTCRGSGV  +R AC +L LP  AS +DG  AF  GWA E +E  PGNQ P  G+
Sbjct:  292 SVRCLLVGMASDTIMGRYLPDKVRAARTKELAYRYSNNKGKTCRGSGVKCVRKACVKLGLPPSASQLDGAVAFAVGWAMEAIEGLPGNQAPRDGI 386          
The following BLAST results are available for this feature:
BLAST of Gcaud2609.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
R7QMQ2_CHOCR1.350e-5974.59Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6PDH2_PORUM3.970e-4364.29Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6PDL7_PORUM9.410e-4264.29Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
R7QFI2_CHOCR8.220e-2543.10Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
D7FHB4_ECTSI8.360e-1946.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 29..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_972_length_15628_cov_3.908026contigNODE_972_length_15628_cov_3.908026:65..441 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2609.t1Gcaud2609.t1Gracilaria caudata M_176_S67 malemRNANODE_972_length_15628_cov_3.908026 65..441 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2609.t1 ID=Gcaud2609.t1|Name=Gcaud2609.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=126bp
XDLEYLDPNIRSMLYGYAAFEVSDRAVGRRIAEDRKEELLKRYKENKGKT
CRGSGVCAIRLACQELNLPAEASHMDGLPAFCAGWASEFMERKPGNQTPE
HGLDHDEVEARFGSSNAWRYPHTQT*
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