Gcaud2531.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2531.t1
Unique NameGcaud2531.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length530
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud2531.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 450..477
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..340
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 271..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..379
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 493..529
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..392

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_290_length_32094_cov_4.541512contigNODE_290_length_32094_cov_4.541512:14923..16512 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2531.t1Gcaud2531.t1Gracilaria caudata M_176_S67 malemRNANODE_290_length_32094_cov_4.541512 14923..16512 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2531.t1 ID=Gcaud2531.t1|Name=Gcaud2531.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=530bp
MKRCRAVDDEHAPSFANVQPLDLEKLADDLELSEQVRHSVQQIVEEWDDT
PASLQSSPSKSAFSSHPMRLWASIRRLWNAVVPAEQQAQDALHTSTPPKR
SLLSSRPNGAARHSRQLVASANSSRGKRFFTAAEKQKAVLKPSLRNNLPV
HSNVDPFFTPRDQQQSPAPATHSTRPSARQTALPLRSSRRLASSRNAQRT
STTASRHTRRPNAHAVRPAVTEDRSMSSIHPPSSPLSHITASATPPSTPP
KSPTLRNNSPASPGNKPHIPHHTLSKSSSFTSKVTSSSEQNASMHTPTIS
PKSPPPAPAIHAPPYQLHEQLSNLTLVDPPPSQTPLEDFFDVDIDESAVA
TNAFPTDDDISTMRLLRNRSQSTPEPRRQRPQSPTTPERPPSLRRLHSSR
TVMRVAKAAVQDVERLASLRRRITGDMRVDRRLAHLRLLQSQLRARRSCL
PSTEDAKERLTGALDRLREKKRQALIEQQRRLSSSWRVPKLGDVPRNVKL
PPLRRPTRRAKEQRMTSSPTDIRRTSYAR*
back to top