Gcaud252.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud252.t1
Unique NameGcaud252.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length389
Homology
BLAST of Gcaud252.t1 vs. uniprot
Match: A0A2V3J4D3_9FLOR (Transportin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4D3_9FLOR)

HSP 1 Score: 331 bits (848), Expect = 2.210e-101
Identity = 164/187 (87.70%), Postives = 173/187 (92.51%), Query Frame = 0
Query:    2 ILGTLARAFSQYQKNNLIVLYDVVCTMADAEGNELAVQEHMNVLMPLLTAQWNATSDNDSKMLSLLECLSHVFRALGMSSQQYAGNIFSRCTSIMDSIYTQEGRGEKEDAHVDFLTCCLDLMCALAEALGPNVDPFVGSNGNGGEPVLPLLFAGMKDGLQEVRQSALALLGELARARTPSLIPALTE 188
            ILG L+ AFSQYQKNNLI LYDVVCT+ADA G ELAVQEHM VLMPLLT QWNATSDNDSKMLSLLECLSHVFRALGMSSQQYAGNIFSRCTSIMD+IY QE RGE++D H+DFLTCCLDLMCALAEALGPNVDPF+ +NGNGG+PVLPLLFAGMKD  QEVRQSA ALLGELARARTPSLIPALTE
Sbjct:  602 ILGALSHAFSQYQKNNLIALYDVVCTLADAVGTELAVQEHMTVLMPLLTGQWNATSDNDSKMLSLLECLSHVFRALGMSSQQYAGNIFSRCTSIMDTIYNQEARGERDDNHIDFLTCCLDLMCALAEALGPNVDPFMSNNGNGGKPVLPLLFAGMKDRRQEVRQSAFALLGELARARTPSLIPALTE 788          
BLAST of Gcaud252.t1 vs. uniprot
Match: S0F325_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F325_CHOCR)

HSP 1 Score: 238 bits (607), Expect = 7.150e-69
Identity = 117/187 (62.57%), Postives = 147/187 (78.61%), Query Frame = 0
Query:    2 ILGTLARAFSQYQKNNLIVLYDVVCTMADAEGNELAVQEHMNVLMPLLTAQWNATSDNDSKMLSLLECLSHVFRALGMSSQQYAGNIFSRCTSIMDSIYTQEGRGEKEDAHVDFLTCCLDLMCALAEALGPNVDPFVGSNGNGGEPVLPLLFAGMKDGLQEVRQSALALLGELARARTPSLIPALTE 188
            IL TL  AF +YQ++N I LYDVVC +ADA G+ELA+ +++N LMPLL +QWN+  D    ML +LECL  VFR++G+ SQQ+A NIFSRC +IMD +Y++E  GE++DAHV+FL   LDLMC+LAEALG +VDPFV  +GNG +P+LPLLF  M+D   EVRQSA ALLGELARAR PSLIPAL+E
Sbjct:  275 ILRTLKVAFERYQQSNRIALYDVVCGLADAVGSELAIPDYLNKLMPLLISQWNSVGDTHLSMLPILECLGVVFRSIGVRSQQFAANIFSRCANIMDIVYSRESHGERDDAHVEFLISSLDLMCSLAEALGASVDPFVAKSGNGAKPLLPLLFVAMRDNRAEVRQSAFALLGELARARIPSLIPALSE 461          
BLAST of Gcaud252.t1 vs. uniprot
Match: A0A1D8QQE3_GRALE (Starch synthase n=2 Tax=Gracilariopsis TaxID=2781 RepID=A0A1D8QQE3_GRALE)

HSP 1 Score: 192 bits (487), Expect = 2.880e-50
Identity = 99/164 (60.37%), Postives = 113/164 (68.90%), Query Frame = 0
Query:  240 GTPVVTYKTGRQRDTVHEWRSEK-----------------W----------------EVRASAYETTIDVSEVAWAWSSEFHKLRNAMYTRGEDVANLVSAAAGEESELYDPHASAVLLQWGGAGENVVIKGSFDNWSAEWLLSKDVGEGGVFGLRLLLRPGEY 370
            GTPVV YKTG  +DTVHEW+SE                  W                E+RASAYETTIDVSEVAWAWSSEFH+LRNAMYTRGE+VA L+SA   EESELYDP+A++VLLQW G  E V +KGSFDNWS+EW LS+ VG   +FGL+LLLRPGEY
Sbjct: 1426 GTPVVAYKTGGLKDTVHEWKSEMGEGNGFTFENYSHGDFLWAVKRALRVFSHPHEYEELRASAYETTIDVSEVAWAWSSEFHRLRNAMYTRGENVAKLISATVDEESELYDPNATSVLLQWAGDAETVAVKGSFDNWSSEWPLSRVVGADSMFGLKLLLRPGEY 1589          
BLAST of Gcaud252.t1 vs. uniprot
Match: R7QIX8_CHOCR (Starch synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIX8_CHOCR)

HSP 1 Score: 175 bits (444), Expect = 1.360e-44
Identity = 87/165 (52.73%), Postives = 112/165 (67.88%), Query Frame = 0
Query:  240 GTPVVTYKTGRQRDTVHEWRSEK-----------------W----------------EVRASAYETTIDVSEVAWAWSSEFHKLRNAMYTRGEDVANLVSAAAGEESELYDPHASAVLLQWGGAGENVVIKGSFDNWSAEWLLSKDVGEGGVFGLRLLLRPGEYT 371
            GTPV+ YKTG  +DTVHEW+S +                 W                E+R +A ETTIDVS+VAWAWSSEFH++RNAMYTRG+ VA+++S+   EE++LYD  A+ VL+QW G+G +VV+KGSFDNW+AEW LS+ VG+ G FGL+LLLRPGEY 
Sbjct: 1213 GTPVIAYKTGGLKDTVHEWKSSQGEGNGFTFEEYSHADFVWAVKRALRVFAQPHEYEEMRVAAAETTIDVSQVAWAWSSEFHRIRNAMYTRGDVVASIISSTVDEETDLYDRSANPVLIQWTGSGNSVVLKGSFDNWTAEWPLSQAVGDHGAFGLKLLLRPGEYV 1377          
BLAST of Gcaud252.t1 vs. uniprot
Match: UPI001E1D60A4 (transportin-1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D60A4)

HSP 1 Score: 148 bits (374), Expect = 9.790e-40
Identity = 72/136 (52.94%), Postives = 99/136 (72.79%), Query Frame = 0
Query:    2 ILGTLARAFSQYQKNNLIVLYDVVCTMADAEGNELAVQEHMNVLMPLLTAQWNATSDNDSKMLSLLECLSHVFRALGMSSQQYAGNIFSRCTSIMDSIYTQEGRGEKEDAHV-DFLTCCLDLMCALAEALGPNVDP 136
            IL T+  AF +YQ+NN ++L D VCT+ADA G ELA QEH+N LMP L  +WN+ +DND  ++ L ECL++VFRALG +SQ +A  +F+RC +I+D++Y+ E  G   DA + DF+TC LDLMC+L EAL   +DP
Sbjct:   34 ILETITVAFEKYQQNNTVMLLDTVCTLADAVGGELAAQEHINKLMPCLMKRWNSITDNDRGLIPLFECLTYVFRALGTASQSFALPVFTRCVNILDAMYSGEA-GINYDAELSDFITCSLDLMCSLTEALAAGLDP 168          
BLAST of Gcaud252.t1 vs. uniprot
Match: Q7XZ25_GRIJA (Glycogen synthase (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ25_GRIJA)

HSP 1 Score: 138 bits (348), Expect = 1.560e-35
Identity = 77/167 (46.11%), Postives = 96/167 (57.49%), Query Frame = 0
Query:  246 YKTGRQRDTVHEWRSEK-----------------W----------------EVRASAYETTIDVSEVAWAWSSEFHKLRNAMYTRGEDVANLVSAAAGEESELYDPHASAVLLQWGGAGENVVIKGSFDNWSAEWLLSK--DVGEGGV------FGLRLLLRPGEYT 371
            YKTG  +DTVHEWR +                  W                E+RASAYETTIDVS+VAWAWSSEFH+LRNAMYTR + V+ L+S+   E SE+YD  +  V + W G GE V++ GSFDNW++EW L +  D G GG       F L+L L PGE+ 
Sbjct:    4 YKTGGLKDTVHEWRGDVAEGNGFTFDTYSHGDLVWAVKRALRVFASGEEYEELRASAYETTIDVSQVAWAWSSEFHRLRNAMYTRTDTVSQLISSTVDERSEMYDSRSVPVRVAWHGKGEKVIVMGSFDNWTSEWPLLRVSDDGAGGAGTGVAAFELKLRLSPGEHA 170          
BLAST of Gcaud252.t1 vs. uniprot
Match: A0A7S3BYR7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BYR7_9EUKA)

HSP 1 Score: 132 bits (332), Expect = 1.720e-30
Identity = 73/195 (37.44%), Postives = 113/195 (57.95%), Query Frame = 0
Query:    2 ILGTLARAFSQYQKNNLIVLYDVVCTMADAEGNELAVQEHMNVLMPLLTAQWNATSDNDSKMLSLLECLSHVFRALGMSSQQYAGNIFSRCTSIMDSIYTQEGRGEKEDAHV---DFLTCCLDLMCALAEALGPNVDPFVGSNGNGGEPVLPLLFAGMKDGLQEVRQSALALLGELARARTPSLIPALTESKDLL 193
            IL  L  A  +YQ  NL++LYD V T+AD+ G+EL  + ++ +LMP L A+WN  +D D  +  LLEC + + +ALG   QQ+A  +F+RC  +++S + +E +   E       + + C LDL+  + E +GP ++  +  +     P+  LL A MKD   +VRQSA AL+G+LA+A    L P L E   +L
Sbjct:  165 ILRNLMFACEKYQAKNLLILYDAVGTLADSVGSELNREPYVQILMPPLIARWNMLTDTDKGLFPLLECFTSIAQALGSGFQQFAHPVFTRCLRLIESTFVEERQAHAEGGEPPDKEMIVCALDLISGMTEGMGPAIEQLLAPS-----PMAQLLLACMKDEQPDVRQSAYALVGDLAKAAIGVLRPLLNEHLTVL 354          
BLAST of Gcaud252.t1 vs. uniprot
Match: A0A4P9XLR7_9FUNG (Transportin-PC n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XLR7_9FUNG)

HSP 1 Score: 129 bits (324), Expect = 6.620e-29
Identity = 81/206 (39.32%), Postives = 123/206 (59.71%), Query Frame = 0
Query:    2 ILGTLARAFSQYQKNNLIVLYDVVCTMADAEGNELAVQEHMNVLMPLLTAQWNATSDNDSKMLSLLECLSHVFRALGMSSQQYAGNIFSRCTSIMDSIYTQEGRGEKEDAHV-----DFLTCCLDLMCALAEALGPNVDPFVGSNGNGGEPVLPLLFAGMKDGLQEVRQSALALLGELARARTPSLIPALTE-SKDLLGVVDTTCK 201
            I+  LA AF +YQ+ N+++L+D + T+AD+ G EL+ QE+++ LMP+L  QW    DND  + +LLECL+ V  ALG S Q +AG ++ R   I++    Q G+   +D  +     DFL   LDL+  L + LGP+V+  V ++     P+LPLL   M+D   EVRQSA ALLG++A +    + P L +   +L+  +D T K
Sbjct:  538 IITNLAFAFKKYQRKNMLILFDAIGTLADSVGAELSRQEYVDKLMPMLLEQWQKLPDNDRDLFALLECLASVAVALGPSFQPFAGPVWDRSLRIINGNLMQ-GQACVQDPTLEPPDQDFLIVSLDLLSGLVQGLGPHVEALVLASQ---PPLLPLLGMCMRDASNEVRQSAYALLGDMAISCFKHIEPHLEQIMPELISQIDPTGK 739          
BLAST of Gcaud252.t1 vs. uniprot
Match: A0A7S0Z3Z6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z3Z6_9CRYP)

HSP 1 Score: 126 bits (317), Expect = 1.450e-28
Identity = 70/187 (37.43%), Postives = 109/187 (58.29%), Query Frame = 0
Query:    2 ILGTLARAFSQYQKNNLIVLYDVVCTMADAEGNELAVQEHMNVLMPLLTAQWNATSDNDSKMLSLLECLSHVFRALGMSSQQYAGNIFSRCTSIMDSIYTQEGRGEKEDAHVDFLTCCLDLMCALAEALGPNVDPFVGSNGNGGEPVLPLLFAGMKDGLQEVRQSALALLGELARARTPSLIPALTE 188
            +L   A A  +YQ  NL++LYD   T+AD+ G+EL+ +EHM+VL+P L  +W A +D+D  +  LLECL+ V +ALG +    A  +F RC  ++     Q+  GE +    DF+ C LDL+ +LA+ +G +++  VG +      ++P L    +     VRQSA AL+G+LA+   P L P L +
Sbjct:  137 LLQVFAAALPRYQARNLVILYDACGTLADSLGSELSKKEHMDVLLPPLMQRWQALADDDRSLFPLLECLASVVQALGQAFAPSAPPVFQRCERLIAMGLHQQQSGEMDQLDNDFIVCPLDLISSLADGMGGSIESLVGQS-----QLVPSLLMCCQHPDPAVRQSAFALVGDLAKTSLPHLRPHLGQ 318          
BLAST of Gcaud252.t1 vs. uniprot
Match: A0A7N0U5P9_KALFE (Importin N-terminal domain-containing protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0U5P9_KALFE)

HSP 1 Score: 128 bits (321), Expect = 1.620e-28
Identity = 76/189 (40.21%), Postives = 107/189 (56.61%), Query Frame = 0
Query:    2 ILGTLARAFSQYQKNNLIVLYDVVCTMADAEGNELAVQEHMNVLMPLLTAQWNATSDNDSKMLSLLECLSHVFRALGMSSQQYAGNIFSRCTSIMDSIYTQEGRGEKEDAHVD--FLTCCLDLMCALAEALGPNVDPFVGSNGNGGEPVLPLLFAGMKDGLQEVRQSALALLGELARARTPSLIPALTE 188
            IL  L  A+ +YQ+ NL ++YD + T+ADA G EL   +++++LMP L ++W A SD D  +  LLEC + + +ALGM   Q+A  +F RC SI+ +    +          D  F+ CCLDL+  LAE LG  ++  V SN N    +  LL     D   +VRQSA ALLG+LAR     L P L+E
Sbjct:  526 ILQHLMCAYGKYQRRNLRIVYDAIGTLADAVGGELNQPKYLDILMPPLISKWQALSDTDKDLFPLLECFTSLAQALGMGFSQFAEPVFRRCISIIQTQQLAKCNAASAGVQYDKEFVVCCLDLLSGLAEGLGSGIESLV-SNSN----LRDLLLQCCMDDASDVRQSAFALLGDLARVCPVHLHPRLSE 709          
The following BLAST results are available for this feature:
BLAST of Gcaud252.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4D3_9FLOR2.210e-10187.70Transportin-1 n=1 Tax=Gracilariopsis chorda TaxID=... [more]
S0F325_CHOCR7.150e-6962.57Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1D8QQE3_GRALE2.880e-5060.37Starch synthase n=2 Tax=Gracilariopsis TaxID=2781 ... [more]
R7QIX8_CHOCR1.360e-4452.73Starch synthase n=1 Tax=Chondrus crispus TaxID=276... [more]
UPI001E1D60A49.790e-4052.94transportin-1-like n=1 Tax=Mercenaria mercenaria T... [more]
Q7XZ25_GRIJA1.560e-3546.11Glycogen synthase (Fragment) n=1 Tax=Griffithsia j... [more]
A0A7S3BYR7_9EUKA1.720e-3037.44Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A4P9XLR7_9FUNG6.620e-2939.32Transportin-PC n=1 Tax=Thamnocephalis sphaerospora... [more]
A0A7S0Z3Z6_9CRYP1.450e-2837.43Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7N0U5P9_KALFE1.620e-2840.21Importin N-terminal domain-containing protein n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 214..241
NoneNo IPR availablePANTHERPTHR10527:SF3FI21453P1coord: 2..187
NoneNo IPR availableCDDcd02859E_set_AMPKbeta_like_Ncoord: 323..374
e-value: 3.68461E-8
score: 48.3641
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..205
e-value: 4.1E-49
score: 169.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 320..381
e-value: 5.6E-7
score: 31.5
IPR032640AMP-activated protein kinase, glycogen-binding domainPFAMPF16561AMPK1_CBMcoord: 323..371
e-value: 9.4E-7
score: 29.0
IPR040122Importin beta familyPANTHERPTHR10527IMPORTIN BETAcoord: 2..187
IPR021133HEAT, type 2PROSITEPS50077HEAT_REPEATcoord: 148..186
score: 8.746901
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 2..215
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 322..371

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_5578_length_1512_cov_10.010556contigNODE_5578_length_1512_cov_10.010556:2..1404 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud252.t1Gcaud252.t1Gracilaria caudata M_176_S67 malemRNANODE_5578_length_1512_cov_10.010556 2..1404 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud252.t1 ID=Gcaud252.t1|Name=Gcaud252.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=389bp
MILGTLARAFSQYQKNNLIVLYDVVCTMADAEGNELAVQEHMNVLMPLLT
AQWNATSDNDSKMLSLLECLSHVFRALGMSSQQYAGNIFSRCTSIMDSIY
TQEGRGEKEDAHVDFLTCCLDLMCALAEALGPNVDPFVGSNGNGGEPVLP
LLFAGMKDGLQEVRQSALALLGELARARTPSLIPALTESKDLLGVVDTTC
KDSFTLYYSLYKYNPNARQEFDNLEAALKDIRKMLDLAEGTPVVTYKTGR
QRDTVHEWRSEKWEVRASAYETTIDVSEVAWAWSSEFHKLRNAMYTRGED
VANLVSAAAGEESELYDPHASAVLLQWGGAGENVVIKGSFDNWSAEWLLS
KDVGEGGVFGLRLLLRPGEYTIFKLYGGTGRLKRNFSVX
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR013783Ig-like_fold
IPR032640AMPK1_CBM
IPR040122Importin_beta
IPR021133HEAT_type_2
IPR016024ARM-type_fold
IPR014756Ig_E-set