Gcaud2462.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2462.t2
Unique NameGcaud2462.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length649
Homology
BLAST of Gcaud2462.t2 vs. uniprot
Match: A0A2V3IXM5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXM5_9FLOR)

HSP 1 Score: 173 bits (438), Expect = 2.330e-42
Identity = 180/669 (26.91%), Postives = 301/669 (44.99%), Query Frame = 0
Query:   14 ITPHALQIDRAGDVIVKMKASVIDSERLTFTVLRKNMQCALDSLEVTDSRGTTPLVTFSSP--TNFDGKKMQSEQAWDAMLREARGARVQVEAEGGCADGTLMGIQRDFAANDEQVCSTSVVLLSNGEVSVHRVDDIRSVCFLDDDITERLKRESFLKHSVVETLKHYRIVIVVSGKGEGQVNVCYRQQSPYTPAFETFYTMN--DTADENGYRKTKR---FFTIRNPMHYDIVEVEVQLQ---------TGIYRRGRYGPAYGDVENPDSSSDSVSERSTEED-------DEFFDLASSDSTTSIRAEDGLENNVYNI---NQKVTLKEGESVRIFHSETAVKCDFLFSTEIGKTNVVDTQSIQNVGGELLGAGTWFWEDRATKEKRSFYY-YDVAGHTEYGSALIWSSTPRCRGSKQRIPEIGRALCSEVTGNKLRVSFEWNVTAIYRFQNESSHEFDMFLQHECVVSPRRRSHIEASMQYADKGMHAEEAGAKLEL--SCCSFRTGVRNFMLKLAPRKETIVTVRE--KSTPECPLQREYAIPGDCTVKKLQFLRSRGAVNESTMKRLEEVMRLVRDFSRLERDHKAHLEKLQ-MVRAKLEEEGKVEQENGEDL------------LGKYLESMDRARTMSEGITEAVDRVE--LSMAETRLKIRK 636
            I P +L I R G + V  KA+V+DSE+L FTV +K MQ  +DSL+V DSRG  P +TF S   ++ D   ++SE AW+ ++ E +GA VQV     C +G L+G++   A + E+   TSV+LL + +VS H +D++ S+ F +   +  LK+ +  K   ++T  +Y I IV SG G G+V+V Y Q     P F T Y ++  D A   G  +  R   F TIRNP+  DI +VEV +Q         T +Y + +     G   + D+SS        EED        +  +L  + STT+ +A      N +       K++LKEG   RI   E   +   +     G         ++N     L  G   +     +   SF   + + G     +   ++    CRGS      + R +       KL  +  +  TA Y   N    + D+F+ H+   S R     EA   +  K +   E   K  +     S    + ++ + +A ++   + V E  K   E PL        + ++K +  L     + +  +  L +V+R+ R+   L R   +H ++L+ ++  +  E  + E++ GE++            L  Y+  + R+ T  + I E +D ++  L   +  LK++K
Sbjct:   16 ILPKSLIISRDGFLQVTRKAAVVDSEKLYFTVPKKQMQRVVDSLQVFDSRGNIPCITFPSSFFSSADNFNLRSENAWEDLVTEQQGAFVQVSMGDDCTEGHLIGLRHHGAGDAEK---TSVLLLRDAKVSAHNIDNVTSISFRESRASAELKKFTTSKGFDLDTKGNYSITIVTSGSGPGEVSVSYTQIVSGAP-FGTSYVISPADGAPSYGIHRNMRIKCFVTIRNPLSCDIEDVEVTIQSQMFQNFPKTKMYSKEQGSGDEGQAMDSDASSAKNEPERDEEDGSGSSELSDIDNLFKNGSTTTSQASIEAYYNSHRAVLATTKLSLKEGGCARIALFEEHCESGLIHYYRAGIDQCFLDLYVRNTTSRHLEPGYGLFSSPDIESTHSFTLKFLMKGERILNTLRRYTG---CRGSATSTSSMERVISCSKVDEKLLATVMFRRTAQYVLHNLEDQDIDVFVFHDTAQSSRTEVESEALWYHNLKTVGGGEQKGKATVIQPRPSDMRSLTDYHVHVASKERCRLVVTEYVKKDVEVPLLY------NVSMKLIANLEKNDMIGKKLVDGLLDVLRIEREIEFLTRRRGSHRKRLKALINHQRNEAERHEEKPGENVPKLDEGLDYEGVLSTYMRVVARSETEIKKIQEVLDDIDYRLISLQHELKLKK 671          
The following BLAST results are available for this feature:
BLAST of Gcaud2462.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IXM5_9FLOR2.330e-4226.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 567..594
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_947_length_15859_cov_4.413686contigNODE_947_length_15859_cov_4.413686:5546..7492 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2462.t2Gcaud2462.t2Gracilaria caudata M_176_S67 malemRNANODE_947_length_15859_cov_4.413686 5546..7492 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2462.t2 ID=Gcaud2462.t2|Name=Gcaud2462.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=649bp
MMKAVREEGKGRIITPHALQIDRAGDVIVKMKASVIDSERLTFTVLRKNM
QCALDSLEVTDSRGTTPLVTFSSPTNFDGKKMQSEQAWDAMLREARGARV
QVEAEGGCADGTLMGIQRDFAANDEQVCSTSVVLLSNGEVSVHRVDDIRS
VCFLDDDITERLKRESFLKHSVVETLKHYRIVIVVSGKGEGQVNVCYRQQ
SPYTPAFETFYTMNDTADENGYRKTKRFFTIRNPMHYDIVEVEVQLQTGI
YRRGRYGPAYGDVENPDSSSDSVSERSTEEDDEFFDLASSDSTTSIRAED
GLENNVYNINQKVTLKEGESVRIFHSETAVKCDFLFSTEIGKTNVVDTQS
IQNVGGELLGAGTWFWEDRATKEKRSFYYYDVAGHTEYGSALIWSSTPRC
RGSKQRIPEIGRALCSEVTGNKLRVSFEWNVTAIYRFQNESSHEFDMFLQ
HECVVSPRRRSHIEASMQYADKGMHAEEAGAKLELSCCSFRTGVRNFMLK
LAPRKETIVTVREKSTPECPLQREYAIPGDCTVKKLQFLRSRGAVNESTM
KRLEEVMRLVRDFSRLERDHKAHLEKLQMVRAKLEEEGKVEQENGEDLLG
KYLESMDRARTMSEGITEAVDRVELSMAETRLKIRKVISTLNAIGKTM*
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