Gcaud2436.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2436.t1 vs. uniprot
Match: A0A2V3IUK7_9FLOR (Glutamate receptor ionotropic, NMDA 2C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUK7_9FLOR) HSP 1 Score: 363 bits (931), Expect = 4.240e-119 Identity = 188/369 (50.95%), Postives = 254/369 (68.83%), Query Frame = 0
Query: 1 MMHNCTEDGSIKDDARCQCDIGIGGWYLSAKRYQLVDILPAFIHEGIRVSFHVSSTFLTGEDFFFLTTFDVRSWVCIFSLILLFALAKLVDRRFVPVSIDLDLKEDVRLYERPCWPFHREEWNYDRVGEAMKSTVGKLLLQPG-----NEHGESTCHSWLLNITLGICGLFIVLSYEARMTAFLVQERVNPEFQSIEDLKTCRIRPGDVCVPRGSAIENFWNEAIATSECHKGNMPS--LRGSFEEILEAVANRSCKFGLVPDSTVTSAIHGMYCGHLLKSEENIFIDGLGMVLPKNSPFTEAMSLATLEIRGRASTPSWEEYFRKTSECRADTENGVMFSKLRVFFVMAFAAGGSFLIISLVERIKRR 362
MM NCT++G+IKDD C+C+IGIGGW+ SA R + VD+LP F+++GIRV+FHVS+T +G FF+TTFD+RSW+C+F++I+LFALAK +D RF P+ D + R C F R WN R+ +++ST +++LQ N+HG H++ LN+ +GI GL +VLSYEA MTA LVQE V ++QS+EDLKTCRI+P DVCVP GSA+ FWN+AIA +CH+ + RGSFEE L+AV N +CKFGLV DST+ AIHG YCG LL S E I+ GL M+LPKNS T+AM LATL++R AS PS ++YF+ S+C T + + F KL++ FV A A + I + +R+ RR
Sbjct: 97 MMDNCTQNGAIKDDPACRCEIGIGGWFNSADRDERVDLLPPFVYDGIRVTFHVSNTRRSGSKLFFVTTFDLRSWLCLFAIIILFALAKFLDERFAPIP-SADEPNAANSWGR-CLHFLRTNWN--RLITSIRSTTLRIVLQSDHDIVQNQHGA---HNFNLNLIIGIFGLLVVLSYEASMTATLVQETVVSDYQSVEDLKTCRIKPEDVCVPGGSAVLTFWNDAIAYGDCHRESKGKNYFRGSFEETLDAVKNGTCKFGLVLDSTIQEAIHGKYCGQLLSSGEPIYTGGLSMILPKNSNLTKAMRLATLKLRNEASAPSLQQYFQTMSKCAPITGSVLTFEKLQLLFVFAIVACLGCISIKMWQRVWRR 458
BLAST of Gcaud2436.t1 vs. uniprot
Match: A0A2V3IME4_9FLOR (Glutamate receptor 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME4_9FLOR) HSP 1 Score: 313 bits (802), Expect = 1.670e-99 Identity = 152/361 (42.11%), Postives = 226/361 (62.60%), Query Frame = 0
Query: 1 MMHNCTEDGSIKDDARCQCDIGIGGWYLSAKRYQLVDILPAFIHEGIRVSFHVSSTFLTGEDFFFLTTFDVRSWVCIFSLILLFALAKLVDRRFVPVSIDLDLKEDVRLYERPCWPFHREEWNYDRVGEAMKSTVGKLLLQPGNE--HGESTCHSWLLNITLGICGLFIVLSYEARMTAFLVQERVNPEFQSIEDLKTCRIRPGDVCVPRGSAIENFWNEAIATSECHKGNMPSLRGSFEEILEAVANRSCKFGLVPDSTVTSAIHGMYCGHLLKSEENIFIDGLGMVLPKNSPFTEAMSLATLEIRGRASTPSWEEYFRKTSECRADTENGVMFSKLRVFFVMAFAAGGSFLIISLVERI 359
MM +C+E+G++++D C CDIGI GW+ + R++ VD LP F+ +G V FH+S++ ++G FF+TTFD +WV IF L+LLF+ K DR+F P+ L+E +R + Y R A++ST +++L P ++ ++ W+LN + + GLF++LSYEA MTA LVQE V+ FQSI+D +TCRI P +VC+P G A+E FWN +IA CHK P S++E+ AV NR+CK+GL+ +ST +AI+ YCG LL +E+ I+ GL MVLPKNS T+ MS ATL+I +TP E+YF +C + E + F KLR+FF +A G L++ ++ +
Sbjct: 99 MMEDCSENGAVRNDPGCTCDIGISGWFQNHHRFRRVDFLPPFVTDGYEVVFHISNSEVSGRRMFFITTFDRLAWVSIFGLMLLFSAIKFFDRKFCPIDSFEALEETNPRIQRFVHVLMKYPTLY-RFRRALQSTFSRMILLPDSDVVENQTANRQWVLNTVISVSGLFLILSYEASMTASLVQETVSAGFQSIQDFQTCRISPAEVCLPGGGALEMFWNTSIAIEVCHKQRQPFFASSYDELFHAVDNRTCKYGLLLESTANAAINSKYCGKLLAAEKPIYSGGLAMVLPKNSNLTDVMSYATLKITNEVATPGIEQYFASIPKCSINPETTLNFRKLRLFFGIALCTGAFLLLLRIINNV 458
BLAST of Gcaud2436.t1 vs. uniprot
Match: A0A2V3IMD4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMD4_9FLOR) HSP 1 Score: 309 bits (792), Expect = 3.260e-97 Identity = 155/365 (42.47%), Postives = 226/365 (61.92%), Query Frame = 0
Query: 1 MMHNCTEDGSIKDDARCQCDIGIGGWYLSAKRYQLVDILPAFIHEGIRVSFHVSSTFLTGEDFFFLTTFDVRSWVCIFSLILLFALAKLVDR-----RFVPVSIDLDLKEDVR--LYERPCWPFHREEWNYDRVGEAMKSTVGKLLLQPGNEHGESTCHSWLLNITLGICGLFIVLSYEARMTAFLVQERVNPEFQSIEDLKTCRIRPGDVCVPRGSAIENFWNEAIATSE-CHKGNMPSLRGSFEEILEAVANRSCKFGLVPDSTVTSAIHGMYCGHLLKSEENIFIDGLGMVLPKNSPFTEAMSLATLEIRGRASTPSWEEYFRKTSECRADTENGVMFSKLRVFFVMAFAAGGSFLIISLVE 357
MM C+E+G+IKDD C+CDIGIGGW+ ++KR+ VD LP F+++ +V FH+S + ++G FF+TTFD R W+CIF L+LLFA ++ R+ P+ + + LY P F+R + R+ M L+ +P + + W+L + ICGLF++L+YEA MTA +VQE V EFQS +D +TCRI P DVC+PRG + + +W E +A CHKG P L S+EE+ + V NR+C+FG++ +STV S IH YCG +L + I+ GL MVLPK+S TE MSLATL+I A+ PS EE++ T C A+ + F KL++FF++AF G FL + +++
Sbjct: 99 MMERCSENGTIKDDPHCKCDIGIGGWFTNSKRFGRVDFLPPFVYDSYQVIFHISDSKVSGRSPFFITTFDSRGWLCIFGLVLLFATIRMFSAFGDHARYQPLEPTVTPIRRIAHFLYNHPF--FYRLRISIQRIFSRMI-----LMPEPEDFSRPNNTFLWILKTVVTICGLFLILAYEASMTASIVQETVTSEFQSGKDFQTCRIDPKDVCLPRGGSFDTYWTEVLAKERPCHKGRSPHLMTSYEEVFQGVENRTCRFGILLESTVHSTIHRKYCGTILSNGNPIYTGGLAMVLPKDSMHTEVMSLATLKITDAATVPSLEEFYSTTGSCSAELATSLPFQKLQLFFIIAFCTGFLFLTVVVIK 456
BLAST of Gcaud2436.t1 vs. uniprot
Match: A0A2V3IMD5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMD5_9FLOR) HSP 1 Score: 281 bits (718), Expect = 1.900e-87 Identity = 151/359 (42.06%), Postives = 214/359 (59.61%), Query Frame = 0
Query: 2 MHNCTEDGSIKDDAR-CQCDIGIGGWYLSAKRYQLVDILPAFIHEGIRVSFHVSSTFLTGEDFFFLTTFDVRSWVCIFSLILLFALAKLVDRRFVPVSIDLDLKEDVRLYERPCWPFHREEWNYDRVGEAMKSTVGKLLLQPGNE---HGESTCHSWLLNITLGICGLFIVLSYEARMTAFLVQERVNPEFQSIEDLKTCRIRPGDVCVPRGSAIENFWNEAIATSECHKGNMPSLRGSFEEILEAVANRSCKFGLVPDSTVTSAIHGMYCGHLLKSEENIFIDGLGMVLPKNSPFTEAMSLATLEIRGRASTPSWEEYFRKTSECRADTENGVMFSKLRVFFVMAFAAGGSFLIISLV 356
MH CT + S + C CDIGIGGW+ + RY VD LP F+H+ RV+ HVS+T +GE FFL TFD SW+ I +L +F L KL+D RF L R+ R C F + R+ +A +S+V +L+LQP NE +G+ST W LN+ +GIC LF+VLS+EA MTA LVQE++ ++S ED ++C+I P DVC RG A+E FWN IATS CH GN ++EEI + +A+ CKF + +S +T+ I CG L+ EE ++ GL MV+PK S TEAMS AT+ + + E + RK +C + + F KL++FF++AF+ + L + L+
Sbjct: 59 MHECTTNQSTGVSSNSCPCDIGIGGWFQNQFRYGKVDFLPPFVHDRYRVATHVSNTDASGEMPFFLKTFDSLSWITIVALTCIFTLLKLLDSRFAVAEPYTPLSGVSRI--RRCLHFLWKHPRLYRLRKAGQSSVTRLMLQPDNEVVDNGKST-RQWFLNLVIGICALFLVLSFEASMTASLVQEKITSTYESPEDFRSCKIPPSDVCALRGGALEMFWNTNIATSNCHNGNPIQYLSTYEEIYDGLASGKCKFSICLESVITTQIRTQSCGQLVLLEEPLYTSGLSMVVPKGSNLTEAMSKATMTLLLSQPSSFLESFLRKWPKCTKKVASTLTFRKLKLFFILAFSVCAAILFVMLL 414
BLAST of Gcaud2436.t1 vs. uniprot
Match: R7Q540_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q540_CHOCR) HSP 1 Score: 108 bits (271), Expect = 2.380e-24 Identity = 59/171 (34.50%), Postives = 90/171 (52.63%), Query Frame = 0
Query: 176 TAFLVQERVNPEFQSIEDLKTCRIRPGDVCVPRGSAIENFWNEAIATSECHKGNMPSLRGSFEEILEAVANRSCKFGLVPDSTVTSAIHGMYCGHLLKSEENIFIDGLGMVLPKNSPFTEAMSLATLEIRGRASTPSWEEYFRKTSECRADTENGVMFSKLRVFFVMAFAA 346
+A LVQ+ ++ ++ ++DLKTC +RP DVCVP+G AI+ FW I + CHK P +++ ++ + + C + L S+ YCG LL + E GL VLP+ S T +S T+ + P+ E Y R T +C + + KLR FF MAF+A
Sbjct: 10 SAALVQDTLSSRYRGLQDLKTCNVRPSDVCVPKGGAIDLFWINTIGKNACHK-EKPVYFSRYKDGIDNLLTKKCLYMLTLSSSGNELTQREYCGRLLVTGEPALRTGLSFVLPRGSNMTSHLSEKTVFLTDAGVLPTPERYLRATGKC-PEQNLTLNVEKLRFFFYMAFSA 178
BLAST of Gcaud2436.t1 vs. uniprot
Match: R7Q0P8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q0P8_CHOCR) HSP 1 Score: 104 bits (260), Expect = 4.070e-22 Identity = 58/179 (32.40%), Postives = 95/179 (53.07%), Query Frame = 0
Query: 2 MHNC-TEDGSIKDDARCQCDIGIGGWYLSAKRYQLVDILPAFIHEGIRVSFHVSSTFLTGEDFFFLTTFDVRSWVCIFSLILLFALAKLVDRRFVPVSIDLD-LKEDVRLYERPCWPFHREEWNYDRVGEAMKSTVGKLLLQPGNEH--GESTCHSWLLNITLGICGLFIVLSYEARMT 176
M C TE+G++++D C CD+ +GGW S R VD LP F+ +GI ++ HV T + FFLT F + W + L ++F K++DRRFVP L R + Y R+ +A++ST+ +++ ++ + + W+LN+ + C LFI+L+YE+ MT
Sbjct: 100 MDRCVTEEGTMREDPDCNCDMAVGGWMESDTRLGKVDFLPPFLIDGIGIATHVDETSVASAGAFFLTAFSLAVWGLVVMLSVVFTFLKMLDRRFVPPDDSYTPLPASEPRLRRIRHYLLKSRIPY-RLRKALQSTLSRMVGFSNSDPVTDKESSRQWVLNLVIACCSLFIILAYESSMT 277
BLAST of Gcaud2436.t1 vs. uniprot
Match: R7UWV9_CAPTE (Uncharacterized protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UWV9_CAPTE) HSP 1 Score: 73.2 bits (178), Expect = 1.720e-10 Identity = 72/329 (21.88%), Postives = 138/329 (41.95%), Query Frame = 0
Query: 14 DARCQCDIGIGGWYLSAKRYQLVDILPAFIHEGIRVSFHVSSTFLTGEDFFFLTTFDVRSWVCIF-SLILLFALAKLVDRRFVPVSIDLDLKED--VRLYERPCWPFHREEWNYDRVGEAMKSTVGKLLLQPGNEHGESTCHSWLLNITLG---ICGLFIVLSYEARMTAFLVQERVNPEFQSIEDLKTCRIRPGDVCVPRGSAIENFWNEAIATSECHKGNMPSLRGSFEEI----LEAVANRSCKFGLVPDSTVTSAIHGMYCGHLLKSEENIFIDGLGMVLPKNSPFTEAMSLATLEIRGRASTPSWEE-YFRKTSECRADTENGV 331
+ + D+ G + +S R ++ + G+ F + + + FLT R W+ + S +++ A L+D+ +D ED V +E W +E ++ A+ + L Q G H +S W + G + L +V SY A + AFL + N E S+EDL ++ G V S I+ +++ + G+ G+F + + AV + +F ++ D + + G+ G G G LPKNS FTE +++ ++R T + +E ++ ++C ++T + +
Sbjct: 71 EGNTRADLAAGAFTISYDRQSVISFTKPYRDLGMGGLFAIPNR-TAYNPWSFLTPLSYRLWLTMIGSAVVVAAFISLLDKLSPYGHHAMDTNEDGTVDYWEIKNWRREKETMSF---ANALLWALASLFEQGGERHPKS----WSARVAAGTWWLGALILVQSYTANLAAFLTIKISNDEISSVEDLAKSTLKYGSV---EDSQIQTYFDTSTRQPYSDMGHRMRTWGTFYDATYGAVAAVVDGGGEFAMLYDYPILTYWKGLIPGISYTVIPTFGNFGYGFGLPKNSLFTEELTIKIYQLRESGFTDTLDERWYTDLTKCASETTDAL 388
BLAST of Gcaud2436.t1 vs. uniprot
Match: A0A2T7PVY8_POMCA (PBPe domain-containing protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PVY8_POMCA) HSP 1 Score: 68.9 bits (167), Expect = 5.910e-9 Identity = 64/304 (21.05%), Postives = 134/304 (44.08%), Query Frame = 0
Query: 18 QCDIGIGGWYLSAKRYQLVDILPAFIHEG---IRVSFHVSSTFLTGEDFFFLTTFDVRSWVCIFSLILLFALAKLVDRRFVPVSIDLDLKEDVRLYERPCWPFHREEWNYDRVGEAMKSTVGKLLLQPGNEHGESTCHSWLLNITLGICGLFIVLSYEARMTAFLVQERVNPEFQSIEDLKTCRIRPGDVCVPRGSAIENFWNEAIATSECHKGNMPSLRGSFE-----EILEAVANRSCKFGLVPDSTVTSAIHGMYCGHLLKSEENIFIDGLGMVLPKNSPFTEAMSLATLEIRGRASTPSW 313
+ DIG+G + +S+ R +VD F+ +G + + + LTG L+TF W+C+ + ++ + V ++ P S D+++ ++ R+ W +G + G +++Q ++H + +L + L I+ Y A++ + L E + S+EDL ++P V GS ++F+ T+ +K + G+ E + L+ V+ + F + D ++ C L + +GLG++LPK++P+ +A+ L ++ +W
Sbjct: 353 EVDIGVGPYTISSIRETVVDFSVPFMEDGGGILTKKGNSGISILTG-----LSTFSGTIWLCVVATTVVMGFSLFVTGKYSPYS-DVNMSQE-----------RRDTWT---LGTCIIYVCGSVMMQGMDKHPTNVSARCVL-ACWWVFTLLILSVYTAKLASVLTVEVQGAKIDSLEDLLASSVKP---LVVAGSIWDSFFKNPTTTT--YKKIAERMTGAPEVATDADSLDFVSTGTYAF--LHDVNSVKYLYSSDCQKLYLATSTFNNNGLGIILPKDAPYKDAIDTIILRLQEGGILENW 628 The following BLAST results are available for this feature:
BLAST of Gcaud2436.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 8
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2436.t1 ID=Gcaud2436.t1|Name=Gcaud2436.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=386bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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