Gcaud2421.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2421.t1
Unique NameGcaud2421.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length73
Homology
BLAST of Gcaud2421.t1 vs. uniprot
Match: A0A2V3J5W3_9FLOR (Glutaredoxin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5W3_9FLOR)

HSP 1 Score: 126 bits (317), Expect = 5.120e-36
Identity = 58/71 (81.69%), Postives = 66/71 (92.96%), Query Frame = 0
Query:    2 RVKSLFSDLNVDHTVWELDEREDGDDIKGVLLEKTGQRTVPNVFVNGKHVGGCDDTMDLHQKGQLLGMINA 72
            +VKSLF++L+VDHTVWELDER DGDDIKGVLLEKTGQRTVPNVF+ GKHVGGCDDTM L+  G+LLGM+NA
Sbjct:   62 QVKSLFNELDVDHTVWELDERADGDDIKGVLLEKTGQRTVPNVFIGGKHVGGCDDTMALYDGGKLLGMVNA 132          
BLAST of Gcaud2421.t1 vs. uniprot
Match: R7QBL2_CHOCR (Glutaredoxin, GRX4 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBL2_CHOCR)

HSP 1 Score: 97.8 bits (242), Expect = 2.210e-24
Identity = 43/71 (60.56%), Postives = 58/71 (81.69%), Query Frame = 0
Query:    2 RVKSLFSDLNVDHTVWELDEREDGDDIKGVLLEKTGQRTVPNVFVNGKHVGGCDDTMDLHQKGQLLGMINA 72
            RV++LF +L  +HTVWE+D R DG +I+  L E+TGQ TVPNVF+ GKHVGGCDDT++L Q+G+L+ MI+A
Sbjct:   77 RVRALFEELGAEHTVWEVDLRTDGGEIRRFLAEETGQTTVPNVFIGGKHVGGCDDTIELLQQGKLMDMIDA 147          
BLAST of Gcaud2421.t1 vs. uniprot
Match: A0A0L9U621_PHAAN (Glutaredoxin domain-containing protein n=4 Tax=Vigna TaxID=3913 RepID=A0A0L9U621_PHAAN)

HSP 1 Score: 89.4 bits (220), Expect = 1.430e-21
Identity = 40/72 (55.56%), Postives = 54/72 (75.00%), Query Frame = 0
Query:    1 MRVKSLFSDLNVDHTVWELDEREDGDDIKGVLLEKTGQRTVPNVFVNGKHVGGCDDTMDLHQKGQLLGMINA 72
            +RVK LF+ L V + + ELD   DG DI+  LLE TGQRTVPNVF+ GKH+GGCD+T DLH +G+L+ ++ +
Sbjct:   27 VRVKQLFASLGVTYKLLELDVESDGADIQAALLEWTGQRTVPNVFIGGKHIGGCDNTTDLHNQGKLVPLLTS 98          
BLAST of Gcaud2421.t1 vs. uniprot
Match: UPI000C1D580C (glutaredoxin n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D580C)

HSP 1 Score: 88.2 bits (217), Expect = 6.460e-21
Identity = 40/69 (57.97%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    2 RVKSLFSDLNVDHTVWELDEREDGDDIKGVLLEKTGQRTVPNVFVNGKHVGGCDDTMDLHQKGQLLGMI 70
            RVK LFS LN  + V ELDE  DGD+I+  L E TGQRTVPNVF+ GKH+GGCD  M+ H +G+L+ ++
Sbjct:   43 RVKQLFSQLNATYKVIELDEESDGDEIQMALAEWTGQRTVPNVFIGGKHIGGCDSVMEKHNEGKLVPLL 111          
BLAST of Gcaud2421.t1 vs. uniprot
Match: A0A514TNK8_9CRUS (Thioredoxin reductase n=5 Tax=Daphnia magna TaxID=35525 RepID=A0A514TNK8_9CRUS)

HSP 1 Score: 94.0 bits (232), Expect = 8.740e-21
Identity = 44/71 (61.97%), Postives = 58/71 (81.69%), Query Frame = 0
Query:    1 MRVKSLFSDLNVDHTVWELDEREDGDDIKGVLLEKTGQRTVPNVFVNGKHVGGCDDTMDLHQKGQLLGMIN 71
            M+VK LFS LN++  V ELD REDGDDI+  LL+KTGQ+TVPNVFV+G++VGGCD+T+  HQ G+L  ++N
Sbjct:   35 MKVKKLFSSLNLEVAVIELDTREDGDDIQDALLQKTGQKTVPNVFVSGENVGGCDNTIAAHQNGRLEFLLN 105          
BLAST of Gcaud2421.t1 vs. uniprot
Match: E9FZ07_DAPPU (Uncharacterized protein n=4 Tax=Daphnia TaxID=6668 RepID=E9FZ07_DAPPU)

HSP 1 Score: 93.6 bits (231), Expect = 1.200e-20
Identity = 43/71 (60.56%), Postives = 58/71 (81.69%), Query Frame = 0
Query:    1 MRVKSLFSDLNVDHTVWELDEREDGDDIKGVLLEKTGQRTVPNVFVNGKHVGGCDDTMDLHQKGQLLGMIN 71
            ++VK LFS LN++  V E+D REDG DI+  LL+KTGQ+TVPNVFVNG+HVGGCD+T++ HQ G+L  ++N
Sbjct:   35 IKVKQLFSALNLEIGVLEVDTREDGADIQDALLQKTGQKTVPNVFVNGEHVGGCDNTIEAHQNGRLQFLLN 105          
BLAST of Gcaud2421.t1 vs. uniprot
Match: H8ZQC8_REICL (Thioredoxin reductase (Fragment) n=1 Tax=Reishia clavigera TaxID=272940 RepID=H8ZQC8_REICL)

HSP 1 Score: 88.6 bits (218), Expect = 1.860e-20
Identity = 38/71 (53.52%), Postives = 53/71 (74.65%), Query Frame = 0
Query:    2 RVKSLFSDLNVDHTVWELDEREDGDDIKGVLLEKTGQRTVPNVFVNGKHVGGCDDTMDLHQKGQLLGMINA 72
            +VK LF  LNV H V ELD  ++G +++  L E +GQ+TVPNVF+NGKH+GGCDDT+  H + +L+ +INA
Sbjct:   36 KVKDLFKSLNVQHDVLELDTIDNGTNVQSALFELSGQKTVPNVFINGKHIGGCDDTLQAHAENRLMQIINA 106          
BLAST of Gcaud2421.t1 vs. uniprot
Match: UPI0005FBDDB0 (glutaredoxin n=1 Tax=Jatropha curcas TaxID=180498 RepID=UPI0005FBDDB0)

HSP 1 Score: 86.7 bits (213), Expect = 2.900e-20
Identity = 39/70 (55.71%), Postives = 52/70 (74.29%), Query Frame = 0
Query:    2 RVKSLFSDLNVDHTVWELDEREDGDDIKGVLLEKTGQRTVPNVFVNGKHVGGCDDTMDLHQKGQLLGMIN 71
            RVK L + L   + V ELDE  DG +I+  L + TGQRTVPNVF+NGK +GGCDDT++ +QKG+LL ++N
Sbjct:   44 RVKQLLTQLGASYKVIELDEEIDGAEIQAALTQWTGQRTVPNVFINGKRIGGCDDTLEKYQKGELLSLLN 113          
BLAST of Gcaud2421.t1 vs. uniprot
Match: E6Y293_IPOBA (Glutaredoxin n=3 Tax=Ipomoea TaxID=4119 RepID=E6Y293_IPOBA)

HSP 1 Score: 86.3 bits (212), Expect = 2.910e-20
Identity = 40/69 (57.97%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    2 RVKSLFSDLNVDHTVWELDEREDGDDIKGVLLEKTGQRTVPNVFVNGKHVGGCDDTMDLHQKGQLLGMI 70
            RVK+L + L   + + ELD+  DGD I+  LLE TGQRTVPNVF+ GKHVGGCD T++ HQ+GQL+ M+
Sbjct:   28 RVKNLLNQLGAAYKLIELDQENDGDAIQQALLEWTGQRTVPNVFIGGKHVGGCDKTLEKHQQGQLVPML 96          
BLAST of Gcaud2421.t1 vs. uniprot
Match: UPI001EEC79EF (thioredoxin reductase 1, cytoplasmic-like isoform X1 n=2 Tax=Daphnia pulicaria TaxID=35523 RepID=UPI001EEC79EF)

HSP 1 Score: 92.4 bits (228), Expect = 3.090e-20
Identity = 42/71 (59.15%), Postives = 58/71 (81.69%), Query Frame = 0
Query:    1 MRVKSLFSDLNVDHTVWELDEREDGDDIKGVLLEKTGQRTVPNVFVNGKHVGGCDDTMDLHQKGQLLGMIN 71
            ++VK LF+ LN++  V E+D REDG DI+  LL+KTGQ+TVPNVFVNG+HVGGCD+T++ HQ G+L  ++N
Sbjct:  104 IKVKQLFTALNLEIGVLEVDTREDGADIQDALLQKTGQKTVPNVFVNGEHVGGCDNTIEAHQNGRLQFLLN 174          
The following BLAST results are available for this feature:
BLAST of Gcaud2421.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5W3_9FLOR5.120e-3681.69Glutaredoxin n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
R7QBL2_CHOCR2.210e-2460.56Glutaredoxin, GRX4 n=1 Tax=Chondrus crispus TaxID=... [more]
A0A0L9U621_PHAAN1.430e-2155.56Glutaredoxin domain-containing protein n=4 Tax=Vig... [more]
UPI000C1D580C6.460e-2157.97glutaredoxin n=1 Tax=Olea europaea var. sylvestris... [more]
A0A514TNK8_9CRUS8.740e-2161.97Thioredoxin reductase n=5 Tax=Daphnia magna TaxID=... [more]
E9FZ07_DAPPU1.200e-2060.56Uncharacterized protein n=4 Tax=Daphnia TaxID=6668... [more]
H8ZQC8_REICL1.860e-2053.52Thioredoxin reductase (Fragment) n=1 Tax=Reishia c... [more]
UPI0005FBDDB02.900e-2055.71glutaredoxin n=1 Tax=Jatropha curcas TaxID=180498 ... [more]
E6Y293_IPOBA2.910e-2057.97Glutaredoxin n=3 Tax=Ipomoea TaxID=4119 RepID=E6Y2... [more]
UPI001EEC79EF3.090e-2059.15thioredoxin reductase 1, cytoplasmic-like isoform ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014025Glutaredoxin subgroupPRINTSPR00160GLUTAREDOXINcoord: 48..61
score: 44.35
coord: 34..47
score: 56.85
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 1..72
e-value: 2.8E-25
score: 90.2
NoneNo IPR availablePANTHERPTHR45694:SF18GLUTAREDOXIN 2coord: 1..69
NoneNo IPR availablePANTHERPTHR45694GLUTAREDOXIN 2coord: 1..69
NoneNo IPR availablePROSITEPS51354GLUTAREDOXIN_2coord: 1..72
score: 16.91551
NoneNo IPR availableCDDcd03419GRX_GRXh_1_2_likecoord: 2..69
e-value: 6.52702E-35
score: 111.478
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 2..51
e-value: 7.6E-10
score: 38.9
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 2..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_295_length_31939_cov_4.445679contigNODE_295_length_31939_cov_4.445679:15963..16253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2421.t1Gcaud2421.t1Gracilaria caudata M_176_S67 malemRNANODE_295_length_31939_cov_4.445679 15963..16253 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2421.t1 ID=Gcaud2421.t1|Name=Gcaud2421.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=73bp
MRVKSLFSDLNVDHTVWELDEREDGDDIKGVLLEKTGQRTVPNVFVNGKH
VGGCDDTMDLHQKGQLLGMINA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014025Glutaredoxin_subgr
IPR002109Glutaredoxin
IPR036249Thioredoxin-like_sf