Gcaud2419.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2419.t1 vs. uniprot
Match: A0A2V3J775_9FLOR (DNA-directed RNA polymerase III subunit RPC8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J775_9FLOR) HSP 1 Score: 362 bits (929), Expect = 7.500e-124 Identity = 170/231 (73.59%), Postives = 194/231 (83.98%), Query Frame = 0
Query: 1 MFKLVTIEDVLLVPARLFGYPRLDALEHVINKRLSDKVIPGVGLVIAFWDWVQVGEDALQIHSGECSTKCTFRVVVFAPFEGEVLFARVSGAYNEGIFMEMKFFDAITVPKQNLPRPSHFDESERVWIWKPVFEEGGEPQTYYMDVTNESVFRAIEVKFEDSWRVPPSEKKGDSRNPMSIVGALYDAVLQDNQGLGDPLWWYEEEEAEGEXXXXXXXEAEMGEAEMQESEE 231
MFKLVTIEDV+LVPARLFGYPRL++LE+VINKRLSDK+IPGVGLVIAFWDWV+VGEDALQIHSGE +TKCTFRVVVF+PFEGE +F RVSGAY+ G+FME+ FFDAITV K+NLPRPS +DE ERVWIWKP FEE GE QT+YMDVTNESVFR +E+ FEDSWR+PP+E+ + RNPMSI ALYD +QDNQGLGDPLWWYEE E E E + EAE+ E E
Sbjct: 1 MFKLVTIEDVVLVPARLFGYPRLESLEYVINKRLSDKIIPGVGLVIAFWDWVKVGEDALQIHSGESNTKCTFRVVVFSPFEGEAVFGRVSGAYDGGVFMELGFFDAITVKKENLPRPSSYDEDERVWIWKPTFEEEGEAQTFYMDVTNESVFRVMELMFEDSWRIPPTERNVEGRNPMSIFAALYDEAVQDNQGLGDPLWWYEEGEGEDEGEEGGVGDGAKEEAEVLEDGE 231
BLAST of Gcaud2419.t1 vs. uniprot
Match: A0A6G1IX85_9PLEO (DNA-directed rna polymerase III 25 kd polypeptide n=1 Tax=Lentithecium fluviatile CBS 122367 TaxID=1168545 RepID=A0A6G1IX85_9PLEO) HSP 1 Score: 135 bits (341), Expect = 1.820e-35 Identity = 82/229 (35.81%), Postives = 126/229 (55.02%), Query Frame = 0
Query: 1 MFKLVTIEDVLLVPARLFGYPRLDALEHVINKRLSDKVIPGVGLVIAFWDWVQVGEDALQIHSGECSTKCTFRVVVFAPFEGEVLFARVSGAYNEGIFMEMKFFDAITVPKQNLPRPSHFDESERVWIWKPVFEEGGEPQTYYMDVTNESVFRAIEVKFEDSWRVPPSEKKGDSR-NPMSIVGALYDAVL--QDNQGLGDPLWWYE-EEEAEGEXXXXXXXEAEMGEAE 225
MF L TIED++ + G P A++ IN + S+K+I VGL I +D +Q E + +G + FR+VVF PF GE+L+ R+ + EGI ++++FF+ I+VP QNLP+P FD +E VWIW+P +G E + D ESV +V+ E+ + PS ++ D+ N ++ +G ++ + GLG LWW E EE E + +MGE E
Sbjct: 1 MFILSTIEDLIQIEPEATGRPSAQAIKDAINTKFSNKIIQKVGLCICLFDILQTSEGLIGHGTGLVNVNVEFRMVVFRPFRGEILYGRIKSSNEEGIVIDVEFFNEISVPYQNLPKPCTFDHAEGVWIWRP---DGAE---LFFD-RGESVL--FKVEHEEWFDQKPSVQQKDAHGNTITDIGGTAWRIIGSMEQSGLGPTLWWGEGNEETEQGGQEEADEDVDMGEEE 220
BLAST of Gcaud2419.t1 vs. uniprot
Match: A0A6A6ISN4_9PLEO (DNA-directed RNA polymeras-like protein III 25 kDa polypeptide n=1 Tax=Trematosphaeria pertusa TaxID=390896 RepID=A0A6A6ISN4_9PLEO) HSP 1 Score: 133 bits (335), Expect = 1.310e-34 Identity = 77/211 (36.49%), Postives = 109/211 (51.66%), Query Frame = 0
Query: 1 MFKLVTIEDVLLVPARLFGYPRLDALEHVINKRLSDKVIPGVGLVIAFWDWVQVGEDALQIHSGECSTKCTFRVVVFAPFEGEVLFARVSGAYNEGIFMEMKFFDAITVPKQNLPRPSHFDESERVWIWKPVFEEGGEPQTYYMDVTNESVFRAIEVKFEDSWRVPPSEKKGDSRNPMSIVGALYDAVLQDNQ-GLGDPLWWYEEEEAEGE 210
MF L TIED++ +P R FG P AL+ IN + S+K+I VGL + WD +Q E + +G + FR+ VF PF GE+L+ R+ A EGI +++ F + +P QNL S FDE E WIW+P EGG + D +FR + ++ D + P +K + + + NQ GLG LWW EEA GE
Sbjct: 1 MFILTTIEDLIQIPPRDFGKPSAQALKDAINAKYSNKIIQKVGLCLCMWDLLQTSEGLIGHGTGLVNVNVEFRMTVFRPFRGEILYGRIKSANEEGIVIDLDFTSEVFIPHQNLFENSTFDEGESTWIWRP---EGGAE--LFFDKGEPVLFRVEQEEWID--QKPTMVRKNEQGEVEETRDTAWRLIGSMNQSGLGPTLWW---EEAGGE 201
BLAST of Gcaud2419.t1 vs. uniprot
Match: A0A2V1DMR2_9PLEO (DNA-directed RNA polymeras-like protein III 25 kDa polypeptide n=1 Tax=Periconia macrospinosa TaxID=97972 RepID=A0A2V1DMR2_9PLEO) HSP 1 Score: 131 bits (329), Expect = 1.020e-33 Identity = 72/207 (34.78%), Postives = 108/207 (52.17%), Query Frame = 0
Query: 1 MFKLVTIEDVLLVPARLFGYPRLDALEHVINKRLSDKVIPGVGLVIAFWDWVQVGEDALQIHSGECSTKCTFRVVVFAPFEGEVLFARVSGAYNEGIFMEMKFFDAITVPKQNLPRPSHFDESERVWIWKPVFEEGGEPQTYYMDVTNESVFRAIEVKFEDSWRVPPSEKKGDSRNPMSIVGALYDAV-LQDNQGLGDPLWWYEEEE 206
MF L TIED++ + + FG P A++ IN + S+KVI VGL + WD +Q E + +G + FR+ VF PF GE+L+ R+ + EGI +++ F + VP NL S FD++E+ WIWK EGG + D +F+ ++ D + P E+K D N + G + + L + GLG LWW EE
Sbjct: 1 MFILTTIEDLIQITPQEFGKPSAQAIKDAINTKYSNKVIQNVGLCLCLWDILQTSEGLIGHGTGLVNVNVEFRMTVFRPFRGEILYGRIKSSNEEGIILDLDFTSEVFVPYTNLFEGSDFDQTEQTWIWK---HEGGSE--LFFDRGESVLFKVDREEWYD--QKPTIEQKDDEGNVIETRGTAWRLIGLMNFSGLGPTLWWEPGEE 200
BLAST of Gcaud2419.t1 vs. uniprot
Match: A0A0D8Y3L5_DICVI (RNA polymerase Rpb7 protein n=1 Tax=Dictyocaulus viviparus TaxID=29172 RepID=A0A0D8Y3L5_DICVI) HSP 1 Score: 131 bits (329), Expect = 1.020e-33 Identity = 71/203 (34.98%), Postives = 109/203 (53.69%), Query Frame = 0
Query: 1 MFKLVTIEDVLLVPARLFGYPRLDALEHVINKRLSDKVIPGVGLVIAFWDWVQVGEDALQIHSGECSTKCTFRVVVFAPFEGEVLFARVSGAYNEGIFMEMKFFDAITVPKQNLPRPSHFDESERVWIWKPVFEEGGEPQTYYMDVTNESVFRAIEVKFEDSWRVPPSEKKGDSRNPMS--IVGALYDAVLQDNQGLGDPLWW 201
MF L +ED +++ G L IN+RLS++++P +GL I +D ++VG + G T+ FR+VVF PF EV+ ARV+ + +EG+ + ++FF+ IT+P LP P F++SE+VW W+ ++G P YMD FR +E F D V P+ D +N S I+G + + GLG WW
Sbjct: 6 MFVLALLEDTIVIKPHELGIELGSVLRRRINQRLSNRIVPQLGLCICVYDLLEVGVTYILPGEGSGHTRVKFRLVVFRPFVDEVIQARVASSSSEGLKLSVEFFEDITIPADRLPEPHIFEQSEKVWYWEYPSDDGEPPARLYMDPGKIVRFRVVENIFRD---VKPNPTSDDVQNEKSYEIIGTMAET------GLGCVAWW 199
BLAST of Gcaud2419.t1 vs. uniprot
Match: B6K0P2_SCHJY (DNA-directed RNA polymerase III complex subunit Rpc25 n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6K0P2_SCHJY) HSP 1 Score: 130 bits (326), Expect = 2.050e-33 Identity = 77/207 (37.20%), Postives = 105/207 (50.72%), Query Frame = 0
Query: 1 MFKLVTIEDVLLVPARLFGYPRLDALEHVINKRLSDKVIPGVGLVIAFWDWVQVGEDALQIHSGECSTKCTFRVVVFAPFEGEVLFARVSGAYNEGIFMEMKFFDAITVPKQNLPRPSHFDESERVWIWK-PVFEEGGEPQTYYMDVTNESVFRAIEVKFEDSWRVPPSEKKGDSRNPMSIVG----ALYDAVLQ-DNQGLGDPLWW 201
MF L I DV+ + F P +AL INK+ ++KVI VGL IA +D++ +GE ++ G FR++VF PF GEV+ R+ GI + + FFD I VPK+ LP PS ++ ER W+W+ P E GEP +MDV E F+ F D + PS +S + V A Y V GLG P WW
Sbjct: 1 MFVLSVISDVVKIHPSDFWKPTKEALSDEINKKYANKVIQQVGLAIAIFDFLTIGEGIIKFGDGCSYMNVKFRLLVFRPFRGEVMLGRIKSCTELGIRVTLGFFDDIFVPKEMLPDPSVYNAQERAWVWRVPSEETDGEPSELFMDVGEEIRFQIESEHFID---ISPSRPSANSAAATTDVRTEAEAPYSLVASCSKDGLGIPAWW 204
BLAST of Gcaud2419.t1 vs. uniprot
Match: A0A163I1R2_DIDRA (DNA-directed RNA polymerase n=4 Tax=Didymellaceae TaxID=683158 RepID=A0A163I1R2_DIDRA) HSP 1 Score: 129 bits (325), Expect = 3.580e-33 Identity = 73/212 (34.43%), Postives = 116/212 (54.72%), Query Frame = 0
Query: 1 MFKLVTIEDVLLVPARLFGYPRLDALEHVINKRLSDKVIPGVGLVIAFWDWVQVGEDALQIHSGECSTKCTFRVVVFAPFEGEVLFARVSGAYNEGIFMEMKFFDAITVPKQNLPRPSHFDESERVWIWKPVFEEGGEPQTYYMDVTNESVFRAIEVKFEDSWRVPPSEKKGDSRNPMSIVGALYDAVLQDNQ-GLGDPLWWYE-EEEAEGE 210
MF L TI+D++ + + FG P ++ IN + S+K++PGVGL IA WD + E + +G + FR+ VF PF GE+++ R+ + EGI +++ F I VP QNL S F+++E VW+W +G E ++D +FR + ++ D + P E++ ++ + G + + NQ GLG LWW E EEE EGE
Sbjct: 1 MFILSTIQDLIQLKPQDFGKPSAQTIKDAINDKYSNKIVPGVGLCIALWDLLSATEGLIGHGTGLVNINAEFRLAVFRPFRGEIIYGRIKSSNPEGIVIDLDFTSEIFVPYQNLFENSSFNQAENVWVWN---SDGTE---LFLDKGEPVLFRVEQEEWID--QRPTIEQRNENNEIVDERGTAWRVIGSMNQAGLGPTLWWGEQEEEXEGE 204
BLAST of Gcaud2419.t1 vs. uniprot
Match: E4ZW44_LEPMJ (Similar to DNA-directed RNA polymerase III 25 kDa polypeptide n=3 Tax=Pleosporineae TaxID=715340 RepID=E4ZW44_LEPMJ) HSP 1 Score: 127 bits (320), Expect = 1.980e-32 Identity = 71/211 (33.65%), Postives = 114/211 (54.03%), Query Frame = 0
Query: 1 MFKLVTIEDVLLVPARLFGYPRLDALEHVINKRLSDKVIPGVGLVIAFWDWVQVGEDALQIHSGECSTKCTFRVVVFAPFEGEVLFARVSGAYNEGIFMEMKFFDAITVPKQNLPRPSHFDESERVWIWKPVFEEGGEPQTYYMDVTNESVFRAIEVKFEDSWRVPPSEKKGDSRNPMSIVGALYDAVLQDNQ-GLGDPLWWYEEEEAEGE 210
MF L TI+D++ + + F P A++ V+N + S+K++PG+GL I WD + E + +G + FR+ VF PF GE+++ R+ + EGI +++ F I +P QNL S FD++E VW+W +G E + D +FR + ++ D + P +K + N + G + + NQ GLG LWW E+EE EGE
Sbjct: 1 MFILTTIQDLIQIAPQDFKKPSDQAIKDVVNDKYSNKIVPGIGLCICMWDLLSASEGLIGHGTGLVNVNIEFRMAVFRPFRGEIIYGRIKSSSPEGIIIDLDFTSEIFIPYQNLFENSSFDQAESVWVWN---SDGTE---LFFDKGEPVLFRVEQEEWID--QRPTIVQKDEDGNVIEERGTAWRIIGSMNQAGLGPTLWWGEQEE-EGE 202
BLAST of Gcaud2419.t1 vs. uniprot
Match: A0A0C2CNL1_9BILA (RNA polymerase Rpb7 protein n=3 Tax=Ancylostoma TaxID=29169 RepID=A0A0C2CNL1_9BILA) HSP 1 Score: 127 bits (318), Expect = 3.710e-32 Identity = 75/212 (35.38%), Postives = 110/212 (51.89%), Query Frame = 0
Query: 1 MFKLVTIEDVLLVPARLFGYPRLDALEHVINKRLSDKVIPGVGLVIAFWDWVQVGEDALQIHSGECSTKCTFRVVVFAPFEGEVLFARVSGAYNEGIFMEMKFFDAITVPKQNLPRPSHFDESERVWIWKPVFEEGGEPQTYYMDVTNESVFRAIEVKFEDSWRVPPSEKKGDSRNPMS--IVGALYDAVLQDNQGLGDPLWWYEEEEAEGE 210
MF L +ED + V G L IN+RLS+KV+P +GL I +D ++VG + G TK FR+VVF PF EV+ ARV + + G+ + ++FF+ I +P + LP P F++SE+VW W+ E+G P YMD FR +E F D V P+ +++ S I+G + + GLG WW + E GE
Sbjct: 1 MFVLALLEDTVAVKPHELGKELGSVLRRRINQRLSNKVVPELGLCICVYDLLEVGVTYILPGEGSGHTKVKFRLVVFRPFVDEVIQARVVSSNSHGLTLSVEFFEDIIIPAERLPEPHVFEQSEQVWYWEYPAEDGQPPARLYMDPGKTVRFRVVENIFRD---VKPNLTPEEAQKEKSYEIIGTMAET------GLGCVAWWSQTVEDGGE 203
BLAST of Gcaud2419.t1 vs. uniprot
Match: A0A177D844_ALTAL (S1 motif domain-containing protein n=7 Tax=Alternaria TaxID=5598 RepID=A0A177D844_ALTAL) HSP 1 Score: 126 bits (316), Expect = 8.160e-32 Identity = 74/232 (31.90%), Postives = 118/232 (50.86%), Query Frame = 0
Query: 1 MFKLVTIEDVLLVPARLFGYPRLDALEHVINKRLSDKVIPGVGLVIAFWDWVQVGEDALQIHSGECSTKCTFRVVVFAPFEGEVLFARVSGAYNEGIFMEMKFFDAITVPKQNLPRPSHFDESERVWIWKPVFEEGGEPQTYYMDVTNESVFRAIEVKFEDSW-RVPPSEKKGDSRNPMSIVGALYDAVLQDNQGLGDPLWWYEEEEAEGEXXXXXXXEAEMGEAEMQESEE 231
MF L TI+D++ + + F P A++ V+N + S++++PG+GL + WD V E + +G + FR+ VF PF GE+L+ R+ + EGI ++++F + VP QNLP S F ++E VWIW EG E + D +FR ++ D + ++KG+ + ++ Q GLG LWW E E E E E G+ EM+ +EE
Sbjct: 1 MFILTTIQDLIQIKPQDFEKPSAQAIKDVVNDKYSNRIVPGIGLCLCMWDLVSATEGLIGHGTGLVNVNIEFRMTVFRPFRGEILYGRIKSSNEEGIIIDLEFTSEVFVPYQNLPENSSFSKAEMVWIWN---SEGTE---LFFDKGEPVLFRVEHEEWYDQRPTIVEKDEKGEIIEERPTAWKIIGSMGQP--GLGPTLWWAEGGEEE---------EGEEGDVEMEGAEE 215 The following BLAST results are available for this feature:
BLAST of Gcaud2419.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2419.t1 ID=Gcaud2419.t1|Name=Gcaud2419.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=277bpback to top |