Gcaud2414.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2414.t1
Unique NameGcaud2414.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length245
Homology
BLAST of Gcaud2414.t1 vs. uniprot
Match: A0A2V3ID25_9FLOR (Putative tyrosine-protein phosphatase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID25_9FLOR)

HSP 1 Score: 196 bits (497), Expect = 8.810e-60
Identity = 88/109 (80.73%), Postives = 100/109 (91.74%), Query Frame = 0
Query:    4 EEMRSELEPVIPPLNFAMVTPGIYRSGYPKTFNHSFLKSLRLKTLIYLCPENCNEQNLAFYRENGINVMQFGIPGNKEPFTDIPEPVIRDALEVLLDVRRHPLLIHCNK 112
            E  ++ + PVIPPLNFAMV+PG+YRSGYP   NHSFLKSL+L TLIYLCPE+CN+QNL+FY++NGI+VMQFGI GNKEPFTDIPEPVIRDALEVLLDVRRHPLLIHCNK
Sbjct:   17 ERPKTAVHPVIPPLNFAMVSPGVYRSGYPNQLNHSFLKSLKLNTLIYLCPEDCNQQNLSFYKQNGISVMQFGIQGNKEPFTDIPEPVIRDALEVLLDVRRHPLLIHCNK 125          
BLAST of Gcaud2414.t1 vs. uniprot
Match: A0A1X6PIZ7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIZ7_PORUM)

HSP 1 Score: 156 bits (395), Expect = 3.470e-44
Identity = 78/124 (62.90%), Postives = 90/124 (72.58%), Query Frame = 0
Query:   13 VIPPLNFAMVTPGIYRSGYPKTFNHSFLKSLRLKTLIYLCPENCNEQNLAFYRENGINVMQFGIPGNKEPFTDIPEPVIRDALEVLLDVRRHPLLIHCNK--------VSSLRWQQDSNTRSTI 128
            +IPPLNFAMVTPG+YRSGYP + NH+FLK LRLKT+IYLCPE+    N+ F + N I V+QFGI GNKEPF DIPE  IRDAL+ LLDVR HP LIHCNK        V +LR  Q  +  STI
Sbjct:   41 LIPPLNFAMVTPGVYRSGYPNSKNHAFLKKLRLKTIIYLCPEDYMAVNVQFMQSNSIRVLQFGIQGNKEPFVDIPEDAIRDALQALLDVRNHPTLIHCNKGKHRTGCLVGTLRKVQRWSLTSTI 164          
BLAST of Gcaud2414.t1 vs. uniprot
Match: A0A5J4YSP2_PORPP (Putative tyrosine-protein phosphatase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSP2_PORPP)

HSP 1 Score: 147 bits (371), Expect = 6.510e-41
Identity = 66/109 (60.55%), Postives = 84/109 (77.06%), Query Frame = 0
Query:    4 EEMRSELEPVIPPLNFAMVTPGIYRSGYPKTFNHSFLKSLRLKTLIYLCPENCNEQNLAFYRENGINVMQFGIPGNKEPFTDIPEPVIRDALEVLLDVRRHPLLIHCNK 112
            +E+ +    +IPPLNFAMV PGIYRSGYP + NH+FL  L+L+T++YLCPE+  + N+ F  +NGI V Q+GI GNKEPF DIPE  IRDAL VLL+ + HP+LIHCNK
Sbjct:    8 DELAASSNILIPPLNFAMVAPGIYRSGYPNSKNHTFLNKLKLRTILYLCPEDYMDANVEFCAQNGIKVFQYGIQGNKEPFVDIPEEAIRDALLVLLNQQNHPVLIHCNK 116          
BLAST of Gcaud2414.t1 vs. uniprot
Match: A0A2R6X497_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X497_MARPO)

HSP 1 Score: 142 bits (358), Expect = 1.320e-38
Identity = 90/218 (41.28%), Postives = 122/218 (55.96%), Query Frame = 0
Query:   13 VIPPLNFAMVTPGIYRSGYPKTFNHSFLKSLRLKTLIYLCPENCNEQNLAFYRENGINVMQFGIPGNKEPFTDIPEPVIRDALEVLLDVRRHPLLIHCNK--------VSSLRWQQDSNTRSTI--HRTFSNFFAVYSEVDVLVQRSDPAGQNSFWQKRKSDEMLLIVIPSFLIIWSRAYMSREGRVHSAALKGREIDIPAENDISDTTDKKFLRVLA 220
            +IPPLNFAMV  G+YRSGYP + N +FL  LRL+++IYLCPE   E NL F +++ I +  FGI GNKEPF DIPE VIRDAL++LLDV+ HP+LIHCNK        V  LR  Q+ +  S    +R F+      ++V +L Q+                 M L  + SF  + +R + S  GR  +  L G  ++ PA      T +   + VLA
Sbjct:    8 LIPPLNFAMVDQGVYRSGYPNSKNFTFLHKLRLRSVIYLCPEPYPESNLEFLKKDNITLFHFGIEGNKEPFVDIPEDVIRDALKILLDVKNHPILIHCNKGKHRTGCLVGCLRKVQNWSLTSIFDEYRRFAG-----TKVRMLDQQF----------------MELFDVSSFKQL-ARVWTSGRGRPRNGQLTGTRVE-PAPRTGISTLENAGIAVLA 202          
BLAST of Gcaud2414.t1 vs. uniprot
Match: A9TK73_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TK73_PHYPA)

HSP 1 Score: 140 bits (353), Expect = 3.930e-38
Identity = 66/107 (61.68%), Postives = 80/107 (74.77%), Query Frame = 0
Query:    6 MRSELEPVIPPLNFAMVTPGIYRSGYPKTFNHSFLKSLRLKTLIYLCPENCNEQNLAFYRENGINVMQFGIPGNKEPFTDIPEPVIRDALEVLLDVRRHPLLIHCNK 112
            M  E + +IPPLNFAMV  G+YRSGYP   N  FL+ LRL++++YLCPE   E N+ F  +NGI +  FGI GNKEPF DIPE VIRDAL+VLLDV+  P+LIHCNK
Sbjct:    1 MGPEDDLLIPPLNFAMVDKGVYRSGYPNKKNLPFLQKLRLRSVVYLCPEPYPEANIEFMEKNGIKMFHFGIEGNKEPFVDIPENVIRDALKVLLDVKNQPILIHCNK 107          
BLAST of Gcaud2414.t1 vs. uniprot
Match: Q54MJ2_DICDI (Uncharacterized protein n=5 Tax=Dictyostelia TaxID=33083 RepID=Q54MJ2_DICDI)

HSP 1 Score: 138 bits (348), Expect = 2.150e-37
Identity = 63/110 (57.27%), Postives = 84/110 (76.36%), Query Frame = 0
Query:    4 EEMRSELEPV-IPPLNFAMVTPGIYRSGYPKTFNHSFLKSLRLKTLIYLCPENCNEQNLAFYRENGINVMQFGIPGNKEPFTDIPEPVIRDALEVLLDVRRHPLLIHCNK 112
            +++ ++ +P+ IPPLNF+MV+ G+YRSGYP   NH FLK L LK+++YLCPE  +E N  F R++GI ++ + I GNKEPF DIP+  IRDAL  LLDVR HP+LIHCNK
Sbjct:    9 DDLETKEDPLFIPPLNFSMVSRGVYRSGYPNKKNHPFLKKLGLKSILYLCPEEYSESNTNFIRKHGIKLLHYRIVGNKEPFVDIPDEYIRDALVDLLDVRNHPILIHCNK 118          
BLAST of Gcaud2414.t1 vs. uniprot
Match: A0A7S2ZB04_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZB04_9RHOD)

HSP 1 Score: 137 bits (345), Expect = 4.790e-37
Identity = 64/105 (60.95%), Postives = 83/105 (79.05%), Query Frame = 0
Query:    8 SELEPVIPPLNFAMVTPGIYRSGYPKTFNHSFLKSLRLKTLIYLCPENCNEQNLAFYRENGINVMQFGIPGNKEPFTDIPEPVIRDALEVLLDVRRHPLLIHCNK 112
            SE + +IPPLNF MV PGIYRSG+P   NH+F+K ++LKT++ LC E  +  N  FY+++GI V++FGI GNKEPF ++PE VIR AL+VLLDVR HP+LIHCNK
Sbjct:    7 SESDLLIPPLNFGMVYPGIYRSGHPNNNNHNFMKKMKLKTILVLCIEEVSG-NEQFYQDSGIQVLEFGIEGNKEPFVNMPEDVIRRALQVLLDVRYHPILIHCNK 110          
BLAST of Gcaud2414.t1 vs. uniprot
Match: A0A4P1R7T0_LUPAN (Tyrosine-protein phosphatase domain-containing protein n=4 Tax=Lupinus TaxID=3869 RepID=A0A4P1R7T0_LUPAN)

HSP 1 Score: 137 bits (345), Expect = 6.590e-37
Identity = 63/100 (63.00%), Postives = 79/100 (79.00%), Query Frame = 0
Query:   13 VIPPLNFAMVTPGIYRSGYPKTFNHSFLKSLRLKTLIYLCPENCNEQNLAFYRENGINVMQFGIPGNKEPFTDIPEPVIRDALEVLLDVRRHPLLIHCNK 112
            ++PPLNFAMV  GIYRSG+PK  N SFL++LRL+++IYLCPE   + NL F   NGI + QFGI G+KEPF +IPE  IR+AL+VLLDVR HPL+IHC +
Sbjct:   22 LVPPLNFAMVDNGIYRSGFPKPDNFSFLQTLRLRSIIYLCPEPYPQTNLEFLDSNGIKLYQFGIEGHKEPFVNIPEDTIREALKVLLDVRNHPLIIHCKR 121          
BLAST of Gcaud2414.t1 vs. uniprot
Match: F4PVQ4_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PVQ4_CAVFA)

HSP 1 Score: 140 bits (353), Expect = 1.220e-36
Identity = 65/109 (59.63%), Postives = 81/109 (74.31%), Query Frame = 0
Query:    5 EMRSELEPV-IPPLNFAMVTPGIYRSGYPKTFNHSFLKSLRLKTLIYLCPENCNEQNLAFYRENGINVMQFGIPGNKEPFTDIPEPVIRDALEVLLDVRRHPLLIHCNK 112
            +   + EP+ IPPLNF+MV+ G+YRSGYP   NH FLK L LK+++YLCPE  +E N  F R+NGI ++ + I GNKEPF DIP+  IRDAL  LLDVR HP+LIHCNK
Sbjct:  144 DQEPKEEPIFIPPLNFSMVSSGVYRSGYPNKKNHPFLKKLGLKSILYLCPEEYSESNTNFIRKNGIKLLHYRIVGNKEPFVDIPDEYIRDALVDLLDVRNHPILIHCNK 252          
BLAST of Gcaud2414.t1 vs. uniprot
Match: UPI001CFBD6DD (tyrosine-protein phosphatase DSP1-like isoform X1 n=2 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFBD6DD)

HSP 1 Score: 137 bits (345), Expect = 1.500e-36
Identity = 63/112 (56.25%), Postives = 85/112 (75.89%), Query Frame = 0
Query:    1 MPPEEMRSELEPVIPPLNFAMVTPGIYRSGYPKTFNHSFLKSLRLKTLIYLCPENCNEQNLAFYRENGINVMQFGIPGNKEPFTDIPEPVIRDALEVLLDVRRHPLLIHCNK 112
            +PP     +L  +IPPLNF+MV  GI+RSG+P + N SFL++LRL+++IYLCPE   + N+ F + NGI + QFGI G KEPF +IPE +IR+AL++LLDVR HPLLIHC +
Sbjct:   40 IPPPFAGDDLS-LIPPLNFSMVDNGIFRSGFPDSANFSFLQNLRLRSIIYLCPEQYPDSNMEFLKSNGIRLFQFGIEGRKEPFVNIPEDMIREALKILLDVRNHPLLIHCKR 150          
The following BLAST results are available for this feature:
BLAST of Gcaud2414.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ID25_9FLOR8.810e-6080.73Putative tyrosine-protein phosphatase n=1 Tax=Grac... [more]
A0A1X6PIZ7_PORUM3.470e-4462.90Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YSP2_PORPP6.510e-4160.55Putative tyrosine-protein phosphatase n=1 Tax=Porp... [more]
A0A2R6X497_MARPO1.320e-3841.28Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A9TK73_PHYPA3.930e-3861.68Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
Q54MJ2_DICDI2.150e-3757.27Uncharacterized protein n=5 Tax=Dictyostelia TaxID... [more]
A0A7S2ZB04_9RHOD4.790e-3760.95Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A4P1R7T0_LUPAN6.590e-3763.00Tyrosine-protein phosphatase domain-containing pro... [more]
F4PVQ4_CAVFA1.220e-3659.63Uncharacterized protein n=1 Tax=Cavenderia fascicu... [more]
UPI001CFBD6DD1.500e-3656.25tyrosine-protein phosphatase DSP1-like isoform X1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020428Atypical dual-specificity phosphatase Siw14-like, plant and fungiPRINTSPR01911PFDSPHPHTASEcoord: 50..63
score: 50.0
coord: 13..30
score: 64.56
coord: 86..100
score: 50.11
coord: 69..83
score: 58.62
IPR004861Atypical dual-specificity phosphatase Siw14-likePFAMPF03162Y_phosphatase2coord: 13..112
e-value: 1.8E-30
score: 105.7
IPR029021Protein-tyrosine phosphatase-likeGENE3D3.90.190.10Protein tyrosine phosphatase superfamilycoord: 13..113
e-value: 8.7E-30
score: 105.6
IPR029021Protein-tyrosine phosphatase-likeSUPERFAMILY52799(Phosphotyrosine protein) phosphatases IIcoord: 13..111
NoneNo IPR availablePANTHERPTHR31126TYROSINE-PROTEIN PHOSPHATASEcoord: 11..112
NoneNo IPR availablePANTHERPTHR31126:SF48OS09G0135700 PROTEINcoord: 11..112
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..165
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..183
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 184..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_295_length_31939_cov_4.445679contigNODE_295_length_31939_cov_4.445679:418..3476 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2414.t1Gcaud2414.t1Gracilaria caudata M_176_S67 malemRNANODE_295_length_31939_cov_4.445679 418..3476 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2414.t1 ID=Gcaud2414.t1|Name=Gcaud2414.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=245bp
MPPEEMRSELEPVIPPLNFAMVTPGIYRSGYPKTFNHSFLKSLRLKTLIY
LCPENCNEQNLAFYRENGINVMQFGIPGNKEPFTDIPEPVIRDALEVLLD
VRRHPLLIHCNKVSSLRWQQDSNTRSTIHRTFSNFFAVYSEVDVLVQRSD
PAGQNSFWQKRKSDEMLLIVIPSFLIIWSRAYMSREGRVHSAALKGREID
IPAENDISDTTDKKFLRVLAPCVGDRQMRPAIQPFTDGSFPTSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020428PFA-DSPs
IPR004861Siw14-like
IPR029021Prot-tyrosine_phosphatase-like