Gcaud2413.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2413.t1
Unique NameGcaud2413.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length138
Homology
BLAST of Gcaud2413.t1 vs. uniprot
Match: A0A152A5K0_9MYCE (DNAJ heat shock N-terminal domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A5K0_9MYCE)

HSP 1 Score: 69.3 bits (168), Expect = 2.730e-12
Identity = 48/143 (33.57%), Postives = 73/143 (51.05%), Query Frame = 0
Query:    9 YQALDLPPSATPTDIRLAYKRLSLVTHPDKTRDPDS---------RPRFDLIMEAYNFLSDLSVRD-------ENQHQTVSPVITDEIEVSEMEENDDGL--LYSCRCGGSFVVEKERVKTVLESGRDGVVVSCDGCSLAIKV 133
            Y+ L + P +T  DI+ ++  L L+ HPDK +             + R+  +  AY  L D++ R        E   Q  S  ITDEI++ +ME N+D L   Y+CRCG  FV+ ++++   ++      V  C GCSLAIKV
Sbjct:    5 YEILQVSPESTLNDIKKSFNSLVLLYHPDKQQQQQHSSIELVESIKNRYLDLQSAYECLRDINKRSIYDSQLLELSRQKYS--ITDEIDLDDMEYNEDTLEYYYNCRCGDKFVIREDQLSNDID------VACCGGCSLAIKV 139          
BLAST of Gcaud2413.t1 vs. uniprot
Match: UPI000258E10F (dnaJ homolog subfamily C member 24-like n=1 Tax=Megachile rotundata TaxID=143995 RepID=UPI000258E10F)

HSP 1 Score: 65.5 bits (158), Expect = 6.830e-11
Identity = 46/134 (34.33%), Postives = 64/134 (47.76%), Query Frame = 0
Query:    9 YQALDLPPSATPTDIRLAYKRLSLVTHPDKTRDPDSRPRFDLIMEAYNFLSDLSVRDE-----NQHQTVSPVIT--DEIEVSEMEENDDG--LLYSCRCGGSFVVEKERVKTVLESGRDGVVVSCDGCSLAIKV 133
            Y  L     +T  DI+ AY  L+L  HPDK +      +F  I+EA+N L D   R+E      Q +  S  +T    I+  E+E  DD   L+Y CRCGG + V+KE +    E     + V C  C+  I V
Sbjct:    7 YDVLGCTKQSTSEDIKRAYHALALKFHPDKNQSEFDNAKFQRILEAWNVLRDPKSREEYDTVQKQTELDSECVTVYARIQAEELEVTDDEDILIYRCRCGGVYQVQKEYI----EEKNQSIHVPCLECTFVIIV 136          
BLAST of Gcaud2413.t1 vs. uniprot
Match: A0A4Q9MRU8_9APHY (Diphthamide biosynthesis protein 4 n=1 Tax=Dichomitus squalens TaxID=114155 RepID=A0A4Q9MRU8_9APHY)

HSP 1 Score: 64.7 bits (156), Expect = 1.570e-10
Identity = 45/137 (32.85%), Postives = 69/137 (50.36%), Query Frame = 0
Query:    9 YQALDLPPSATPTDIRLAYKRLSLVTHPDK--TRDPDSRPRFDLIMEAYNFLSDLSVRDENQH------QTVSPVITDEIEVSEMEENDDGL-LYSCRCGGSFVVEKERVKTVLESGRDGVVVSCDGCSLAIKVSPE 136
            Y  L + PSAT  +I+ AY R  L +HPDK  +R P+      L+ EA+  LS   +R E         + + P     + + + +E  D    YSCRCGG+++V +E     LE+G+   +V+C  CS  + V  E
Sbjct:    5 YSLLSVTPSATSAEIKAAYHRRLLASHPDKRASRTPEDGIDIGLLKEAFRTLSTPELRTEYDRLRRVNGKQLGPRPAQVVSLEDFDEEPDSRWTYSCRCGGTYIVTEE----TLEAGQH--LVACASCSEVVWVGYE 135          
BLAST of Gcaud2413.t1 vs. uniprot
Match: UPI0004621354 (hypothetical protein n=1 Tax=Trametes versicolor (strain FP-101664) TaxID=717944 RepID=UPI0004621354)

HSP 1 Score: 63.2 bits (152), Expect = 6.250e-10
Identity = 47/141 (33.33%), Postives = 69/141 (48.94%), Query Frame = 0
Query:    9 YQALDLPPSATPTDIRLAYKRLSLVTHPDKTRDPDSRPR---FDLIMEAYNFLSDLSVRDENQHQTVS------PVITDEIEVSEMEENDDG----LLYSCRCGGSFVVEKERVKTVLESGRDGVVVSCDGCSLAIKVSPE 136
            Y  L + PSA+P DI+ AY R  L +HPDK RD  + P      L+ +A++ L   S+R E      S      P     I + E +E +DG     +Y CRCGG +V  +E    +L++G+   +V C  CS  +    E
Sbjct:    2 YALLAVSPSASPADIKAAYHRALLASHPDK-RDSTAAPNSADIGLLKQAFHTLHTPSLRQEYDRLRASSDSPGGPRPAQVISLEEFDEGEDGEATIWVYPCRCGGRYVATEE----MLDAGQH--LVGCTSCSEVVWAGYE 135          
BLAST of Gcaud2413.t1 vs. uniprot
Match: A0A2A3E572_APICC (DnaJ subfamily A member n=7 Tax=Apis TaxID=7459 RepID=A0A2A3E572_APICC)

HSP 1 Score: 62.8 bits (151), Expect = 7.590e-10
Identity = 44/135 (32.59%), Postives = 71/135 (52.59%), Query Frame = 0
Query:    9 YQALDLPPSATPTDIRLAYKRLSLVTHPDKTRDPDSRPRFDLIMEAYNFLSDLSVRDE-----NQHQTVSPVITD--EIEVSEME---ENDDGLLYSCRCGGSFVVEKERVKTVLESGRDGVVVSCDGCSLAIKV 133
            Y  L     +T  DI+ AY  L+L  HPDK        +F L+++A++ L D  +++E      Q +  S  I    +I VSE+E   +N++ L+Y CRCGG + ++KE ++   +S    V V C  C+ +I V
Sbjct:    7 YNVLGCTKESTAEDIKRAYHALALKFHPDKNTSEFDGMKFQLVLKAWHVLRDPKLKEEYDAIQKQEELDSESILTYAKISVSELETTNDNENILIYRCRCGGLYCIQKEYIQEKNQS----VHVPCLECTFSIIV 137          
BLAST of Gcaud2413.t1 vs. uniprot
Match: A0A6G6FQD3_9APHY (Diphthamide biosynthesis protein 4 n=1 Tax=Trametes gibbosa TaxID=160864 RepID=A0A6G6FQD3_9APHY)

HSP 1 Score: 62.0 bits (149), Expect = 3.380e-9
Identity = 47/140 (33.57%), Postives = 66/140 (47.14%), Query Frame = 0
Query:    9 YQALDLPPSATPTDIRLAYKRLSLVTHPDKTRDPDSRPR-FDLIMEAYNFLSDLSVRDENQ------HQTVSPVITDEIEVSEMEENDDGL-----LYSCRCGGSFVVEKERVKTVLESGRDGVVVSCDGCSLAIKVSPE 136
            Y  L + PSAT  DI+ AY R  L +HPDK     S P    L+ +A+N L    +R           ++  P     I + E EE +D       +YSCRCGG +VV +E     L++G+   +V C  CS  + V  E
Sbjct:   37 YALLSVSPSATSADIKTAYHRALLASHPDKRDPAGSNPTDIGLLKQAFNTLYTPYLRKHYDALRTASRKSSGPRPAQVISLEEFEETEDTSETSFWVYSCRCGGQYVVTEE----TLDAGQH--LVGCASCSEVVWVGYE 170          
BLAST of Gcaud2413.t1 vs. uniprot
Match: A0A137P8W6_CONC2 (Diphthamide biosynthesis protein 4 n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P8W6_CONC2)

HSP 1 Score: 61.2 bits (147), Expect = 4.700e-9
Identity = 47/140 (33.57%), Postives = 72/140 (51.43%), Query Frame = 0
Query:    9 YQALDLPPSATPTDIRLAYKRLSLVTHPDKTRDPDSR--PRFDLIMEAYNFLSDLSVRDE------NQHQTVSPVITDEIEVSEMEENDDG--LLYSCRCGGSFVVEKERV----KTVLESGRD-GVVVSCDGCSLAIKV 133
            YQ L+L  +   + IR+ Y++L+L+ HPDK R+P+      F  + EAY  L D   R +      N       VI +EIE+ EM  N+D     Y+CRCG  + ++++ +       L S ++   +V C  CSL IKV
Sbjct:    9 YQYLNLSSTCEQSQIRINYQKLALLYHPDK-REPNEELDQLFLKVQEAYEILKDPISRKDYDLSLTNIQYKDEGVINEEIEIYEMNFNEDEEYYYYTCRCGDYYRLDEQDLLNSSNEKLASNQELSTLVQCSNCSLIIKV 147          
BLAST of Gcaud2413.t1 vs. uniprot
Match: A0A4Q5LCP5_9BACT (J domain-containing protein n=1 Tax=Hymenobacter persicinus TaxID=2025506 RepID=A0A4Q5LCP5_9BACT)

HSP 1 Score: 61.6 bits (148), Expect = 1.330e-8
Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    9 YQALDLPPSATPTDIRLAYKRLSLVTHPDKTRDPDSRPRFDLIMEAYNFLSD 60
            YQ L+LP  ATP DIR AY+RL L+THPD+T DP +  R+  + +AY  LSD
Sbjct:    5 YQTLELPEQATPDDIRRAYRRLVLLTHPDRTPDPAAHVRYLAVNQAYEVLSD 56          
BLAST of Gcaud2413.t1 vs. uniprot
Match: F8PG36_SERL3 (Diphthamide biosynthesis protein 4 n=1 Tax=Serpula lacrymans var. lacrymans (strain S7.3) TaxID=936435 RepID=F8PG36_SERL3)

HSP 1 Score: 59.3 bits (142), Expect = 1.930e-8
Identity = 48/144 (33.33%), Postives = 71/144 (49.31%), Query Frame = 0
Query:    6 AWAYQALDLPPSATPTDIRLAYKRLSLVTHPDKTRDPDSRPRFD--LIMEAYNFLSDLSVR---DENQHQTVSPVITDEIEVSEMEENDD-------GL-LYSCRCGGSFVVEKERVKTVLESGRDGVVVSCDGCSLAIKVSPE 136
            ++ YQ L +P +A+ TDI+LAY R  L++HPDK  +  + P  D  LI EAY  L+  S R   D    Q   P      ++  +E+  D       GL  Y CRCGG + + +E     ++ G+   +V C  CS  + V  E
Sbjct:    6 SYFYQLLAVPRTASATDIKLAYHRALLLSHPDKRVNAANVPTADIALIKEAYTTLASTSSRATYDAQLSQNRKPSGPRPAQIISLEDFSDTGPDDESGLWTYGCRCGGQYRIGEED----MDKGQH--LVGCTSCSEVVWVGYE 143          
BLAST of Gcaud2413.t1 vs. uniprot
Match: UPI001D1088E4 (J domain-containing protein n=1 Tax=Hymenobacter sp. BT770 TaxID=2886942 RepID=UPI001D1088E4)

HSP 1 Score: 60.8 bits (146), Expect = 2.240e-8
Identity = 32/56 (57.14%), Postives = 38/56 (67.86%), Query Frame = 0
Query:    9 YQALDLPPSATPTDIRLAYKRLSLVTHPDKTRDPDSRPRFDLIMEAYNFLSDLSVR 64
            YQAL+LP  AT  DIR AY+RL L+THPD+T DP +  R+  I  AY  LSD S R
Sbjct:    4 YQALELPEHATAADIRRAYRRLVLLTHPDRTPDPAAHARYLAINAAYEVLSDPSRR 59          
The following BLAST results are available for this feature:
BLAST of Gcaud2413.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A152A5K0_9MYCE2.730e-1233.57DNAJ heat shock N-terminal domain-containing prote... [more]
UPI000258E10F6.830e-1134.33dnaJ homolog subfamily C member 24-like n=1 Tax=Me... [more]
A0A4Q9MRU8_9APHY1.570e-1032.85Diphthamide biosynthesis protein 4 n=1 Tax=Dichomi... [more]
UPI00046213546.250e-1033.33hypothetical protein n=1 Tax=Trametes versicolor (... [more]
A0A2A3E572_APICC7.590e-1032.59DnaJ subfamily A member n=7 Tax=Apis TaxID=7459 Re... [more]
A0A6G6FQD3_9APHY3.380e-933.57Diphthamide biosynthesis protein 4 n=1 Tax=Tramete... [more]
A0A137P8W6_CONC24.700e-933.57Diphthamide biosynthesis protein 4 n=1 Tax=Conidio... [more]
A0A4Q5LCP5_9BACT1.330e-855.77J domain-containing protein n=1 Tax=Hymenobacter p... [more]
F8PG36_SERL31.930e-833.33Diphthamide biosynthesis protein 4 n=1 Tax=Serpula... [more]
UPI001D1088E42.240e-857.14J domain-containing protein n=1 Tax=Hymenobacter s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001623DnaJ domainPRINTSPR00625JDOMAINcoord: 43..63
score: 33.27
coord: 9..27
score: 35.21
coord: 27..42
score: 39.13
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 6..63
e-value: 6.8E-9
score: 45.6
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 9..65
e-value: 6.3E-14
score: 51.8
IPR001623DnaJ domainPROSITEPS50076DNAJ_2coord: 7..73
score: 12.217762
IPR001623DnaJ domainCDDcd06257DnaJcoord: 9..60
e-value: 5.22136E-15
score: 62.9481
IPR036671DPH-type metal-binding domain superfamilyGENE3D3.10.660.10DPH Zinc fingercoord: 74..136
e-value: 6.4E-14
score: 53.3
IPR036671DPH-type metal-binding domain superfamilySUPERFAMILY144217CSL zinc fingercoord: 76..133
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110DnaJ domaincoord: 7..73
e-value: 2.6E-15
score: 58.3
IPR036869Chaperone J-domain superfamilySUPERFAMILY46565Chaperone J-domaincoord: 8..64
IPR007872DPH-type metal-binding domainPFAMPF05207zf-CSLcoord: 78..133
e-value: 4.3E-12
score: 45.6
IPR007872DPH-type metal-binding domainPROSITEPS51074DPH_MBcoord: 71..136
score: 14.373746
IPR044248Diphthamide biosynthesis protein 3/4-likePANTHERPTHR21454DPH3 HOMOLOG-RELATEDcoord: 8..133
NoneNo IPR availablePANTHERPTHR21454:SF31DIPHTHAMIDE BIOSYNTHESIS PROTEIN 4coord: 8..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2515_length_5432_cov_7.848530contigNODE_2515_length_5432_cov_7.848530:4382..4795 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2413.t1Gcaud2413.t1Gracilaria caudata M_176_S67 malemRNANODE_2515_length_5432_cov_7.848530 4382..4795 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2413.t1 ID=Gcaud2413.t1|Name=Gcaud2413.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=138bp
MPSPSAWAYQALDLPPSATPTDIRLAYKRLSLVTHPDKTRDPDSRPRFDL
IMEAYNFLSDLSVRDENQHQTVSPVITDEIEVSEMEENDDGLLYSCRCGG
SFVVEKERVKTVLESGRDGVVVSCDGCSLAIKVSPEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
IPR036671DHP_MB_sf
IPR036869J_dom_sf
IPR007872DHP_MB_dom
IPR044248DPH3/4-like