Gcaud2411.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2411.t1
Unique NameGcaud2411.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length168
Homology
BLAST of Gcaud2411.t1 vs. uniprot
Match: A0A2V3J4P6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4P6_9FLOR)

HSP 1 Score: 161 bits (407), Expect = 3.950e-46
Identity = 81/164 (49.39%), Postives = 110/164 (67.07%), Query Frame = 0
Query:    1 MNASSLQHLYNGCDSLFYISSTAPMKERVWSVMKYRQLGRHGNGSLSESQLKQAFADLKEQRTHVQLLNSYPFWKDLSTALNTNEIERPNPDYVIRKSQLTRDLSDLLQALRCDADVKSYNIHHADVGDLLKDFEIEDDDGLHLRMTHRAETHNHSGLKKVLEF 164
            MN++SL  L  GCD+LFYI+STAPMKER+WS++KYRQ+ +HGN SL+E+QL  A  DL+++   +++LN+YP+ +   T +N + I+   PDYVIRKSQL  D+S LL+A  C+    S NIH  +    L    I+DDDGLH RM   A   N  GLKK  +F
Sbjct:  120 MNSTSLLELRTGCDALFYITSTAPMKERLWSLVKYRQVTKHGNSSLNETQLFAALQDLRKETVQIEVLNAYPYLQTHETPINRSTIDTITPDYVIRKSQLNEDMSKLLRAFGCETRFVSENIHLLEHASGLDKITIDDDDGLHERMLRLARQRNDVGLKKAADF 283          
BLAST of Gcaud2411.t1 vs. uniprot
Match: A0A2V3J1M7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1M7_9FLOR)

HSP 1 Score: 98.6 bits (244), Expect = 5.580e-22
Identity = 60/167 (35.93%), Postives = 90/167 (53.89%), Query Frame = 0
Query:    1 MNASSLQHLYNGCDSLFYISSTAPMKERVWSVMKYRQLGRHGNGSLSESQLKQAFADLKEQRTHVQLLNSYPFWKDLSTALNTNEIERPNPDYVIRKSQLTRDLSDLLQALRCDADVKSYNIHHA--DVGDLLKDFEIEDDDGLHLRMTHRAETHNHSGLKKVLEFL 165
            +N+ ++  L   C +LFYI+S AP++ER+ S  KY   G HGN +L + Q+  A           + LN YP+  D    +N +    PN  YVIRK  L +DL+ LLQ L+CD    S N+H A  D   +L+     DD  L+  +  RA +HN  GL+++ +F+
Sbjct:  110 LNSRTVSLLRKRCSTLFYITSCAPIEERLLSASKYTLSGGHGNSTLDDQQMHAAAEKANSSTRQKRFLNHYPYVDDDKKPINVSTPLVPN--YVIRKPHLRQDLTKLLQTLQCDTSFVSGNVHRAPADESQILQHITAGDDT-LYQTLARRALSHNALGLQQLKQFI 273          
The following BLAST results are available for this feature:
BLAST of Gcaud2411.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J4P6_9FLOR3.950e-4649.39Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1M7_9FLOR5.580e-2235.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_808_length_17683_cov_4.001592contigNODE_808_length_17683_cov_4.001592:11409..11912 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2411.t1Gcaud2411.t1Gracilaria caudata M_176_S67 malemRNANODE_808_length_17683_cov_4.001592 11409..11912 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2411.t1 ID=Gcaud2411.t1|Name=Gcaud2411.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=168bp
MNASSLQHLYNGCDSLFYISSTAPMKERVWSVMKYRQLGRHGNGSLSESQ
LKQAFADLKEQRTHVQLLNSYPFWKDLSTALNTNEIERPNPDYVIRKSQL
TRDLSDLLQALRCDADVKSYNIHHADVGDLLKDFEIEDDDGLHLRMTHRA
ETHNHSGLKKVLEFLTR*
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