Gcaud2389.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2389.t1
Unique NameGcaud2389.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length215
Homology
BLAST of Gcaud2389.t1 vs. uniprot
Match: A0A2V3J275_9FLOR (HAD_SAK_1 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J275_9FLOR)

HSP 1 Score: 386 bits (991), Expect = 5.310e-135
Identity = 188/214 (87.85%), Postives = 199/214 (92.99%), Query Frame = 0
Query:    1 MDLPPRLARALKLHRKAGPIHSLHVFDFDGTLVRTPGPEEGKRRYTLETGHVWTGGWWGRPGSLMPPVVESPFPASRVVRTVFEQMEEVITRSQTAVGVVVTGRIKPVREPVLRILDEICIAAKNDTVAPGESFLDHDAVITHPGGRRTTLEFKEDLFRQLVTDGPLASCPLKELHIWEDRQIHAEAFATDLNDELLKLKTIKTTVHLVTAETP 214
            MDLP RL RALKLH+K GPI SLHVFDFDGTLVRTPGPEEGKRRY LETG  WTGGWWGRPGSL PPVVESPFP+SRVVRTVFEQMEEV+TRSQTAVGVVVTGRI+PVREPVLRILDEICIAAKNDTV  GESFLDH+AVITHPGGRRTTL+FKEDLFRQLVT+GPLASCPLKELHIWEDR+ HAEAFATDLNDEL  LK+I+TTVH VT +TP
Sbjct:    1 MDLPQRLGRALKLHKKMGPIQSLHVFDFDGTLVRTPGPEEGKRRYLLETGRAWTGGWWGRPGSLRPPVVESPFPSSRVVRTVFEQMEEVMTRSQTAVGVVVTGRIQPVREPVLRILDEICIAAKNDTVPAGESFLDHNAVITHPGGRRTTLQFKEDLFRQLVTEGPLASCPLKELHIWEDRKEHAEAFATDLNDELFDLKSIRTTVHFVTPDTP 214          
BLAST of Gcaud2389.t1 vs. uniprot
Match: R7Q5J8_CHOCR (HAD_SAK_1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5J8_CHOCR)

HSP 1 Score: 295 bits (756), Expect = 3.310e-99
Identity = 144/214 (67.29%), Postives = 168/214 (78.50%), Query Frame = 0
Query:    1 MDLPPRLARALKLHRKAGPIHSLHVFDFDGTLVRTPGPEEGKRRYTLETGHVWTGGWWGRPGSLMPPVVESPFPASRVVRTVFEQMEEVITRSQTAVGVVVTGRIKPVREPVLRILDEICIAAKNDTVAPGESFLDHDAVITHPGGRRTTLEFKEDLFRQLVTDGPLASCPLKELHIWEDRQIHAEAFATDLNDELLKLKTIKTTVHLVTAETP 214
            M+LP   + AL L RKAGPI SLHVFDFDGTLVRTPGP EG+ RY  ETG  W GGWWGRP SL PPV+ SP P   V+RTVF ++EEV+T+S+TAVGVVVTGRIKP+R  VLRILDEIC+AAKNDTVA G SFL HDAV THPGGR TTLE+K+ LF  L+T  PL++  + ELHIWEDR+ HAE FAT+L+D+L     + TTVH +TAETP
Sbjct:    1 MELPQAFSAALGLDRKAGPISSLHVFDFDGTLVRTPGPAEGRPRYHAETGQQWKGGWWGRPESLCPPVLPSPCPPGYVIRTVFNELEEVMTKSETAVGVVVTGRIKPLRRSVLRILDEICVAAKNDTVAEGVSFLKHDAVFTHPGGRMTTLEYKKALFHTLLTQEPLSNASISELHIWEDRKEHAEVFATELSDDLRNATGVNTTVHYITAETP 214          
BLAST of Gcaud2389.t1 vs. uniprot
Match: M2W4C9_GALSU (HAD_SAK_1 domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W4C9_GALSU)

HSP 1 Score: 90.1 bits (222), Expect = 1.340e-18
Identity = 64/207 (30.92%), Postives = 98/207 (47.34%), Query Frame = 0
Query:    7 LARALKLHRKAGPIHSLHVFDFDGTLVRTPGPEEGKRRYTLETGHVWT-GGWWGRPGSLMPPVVESPFPASRVVRTVFEQMEEVITRSQTAVGVVVTGRIKPVREPVLRILDEICIAAKNDTVAPGESFLDHDAVITHPGGRRTTLEFKEDLFRQLVTDGPLASCPLKELHIWEDRQIHAEAFATDLNDELLKLKTIKTTVHLVTAE 212
            L R +  HR    +  L VFDFDGTLV+TP PEEGK +Y       W    WW RP SL+PPV+  P P   V+ +V  Q    + +  T + +V+TGR+  VR  VLRI  ++ +      + P   F   +++         T  +K+ + ++L          ++   I+EDR      F   L   + K  +I T+++ V  E
Sbjct:   24 LERNILSHRTKESVQQLCVFDFDGTLVKTPCPEEGKEKYHQYYFQPWPFRSWWSRPESLLPPVISHPLPPELVISSVVSQFRY-LDQELTNLCIVLTGRLSTVRPQVLRITQQLDVG-----ILPWRVFCKPESL----HWTTDTFTYKQQVLQELAR----RFGDIRRFIIYEDRLSQVNLFKNVLAPNMQKQFSIDTSLYHVKGE 216          
BLAST of Gcaud2389.t1 vs. uniprot
Match: A0A7S0Z793_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z793_9CHLO)

HSP 1 Score: 85.9 bits (211), Expect = 2.360e-17
Identity = 66/186 (35.48%), Postives = 90/186 (48.39%), Query Frame = 0
Query:   23 LHVFDFDGTLVRTPGPEEGKRRYTLETGHVWT-GGWWGRPGSLMPPVVESPFPASRVVRTVFEQMEEVITRSQTAVGVVVTGRIKPVREPVLRILDEICIAAKNDTVAPGESFLDHDAVITHPGGRRTTLEFKEDLFRQLVTDGPLASCPLKELHIWEDRQIHAEAFATDLNDELLKLKTIKTTVH 207
            LHVFDFDGTLV TP PE+G R+Y  ETG  W   GWWGR  SL PP+     PA        ++     TRS  A  +++TGR   ++  V  ++ E  I+  ++ +  G     HD           TL +K +  R+LV     A    K + IWEDR  HA AF    + E   ++ + T V 
Sbjct:   22 LHVFDFDGTLVNTPIPEDGMRQYYDETGEQWPFQGWWGRAESLAPPLTMDAGPA-------LDEYRASATRSDVA-RIMMTGRRSKLKASVEAVMREFDISHCHEHIFNGTG---HD-----------TLTYKLNELRRLV-----AVYKPKRVRIWEDRTSHAVAFEEFGSREFSHIEWVTTLVE 180          
BLAST of Gcaud2389.t1 vs. uniprot
Match: A0A5J4YT13_PORPP (HAD_SAK_1 domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YT13_PORPP)

HSP 1 Score: 85.5 bits (210), Expect = 1.360e-16
Identity = 66/184 (35.87%), Postives = 92/184 (50.00%), Query Frame = 0
Query:   20 IHSLHVFDFDGTLVRTPGPEEGKRRYTLETG--HVWTGGWWGRPGSLMPPVVESPFPASRVVRTVFEQMEEVITRSQTAVGVVVTGRIKPVREPVLRILDEICIAAKNDTVAPGESFLDHDAVITHPGGRRTTLEFKEDLFRQLVTDGPLASCPL---KELHIWEDRQIHAEAFATDLNDELLK 198
            + +L V DFDGTLV TPGPE+G+  Y   TG    W+G WWGRP SL PP+V SP P   ++     Q      +  T   +V+TGR++ +R  V RIL ++ +            FL  +  +    G    L FK +L   LV  G +A+  L   K+L +W+DR      F     DELL+
Sbjct:   48 VTTLDVVDFDGTLVWTPGPEDGRNLYQSCTGVPFPWSG-WWGRPESLRPPLVPSPAPRD-MLNDELAQRLRASWKDPTHFSIVLTGRVEKLRADVERILTDLDMG-----------FLCGEDRLFMKRGSDDVLRFKSNLLLSLVL-GDVAALNLSGVKKLVLWDDRIDQVRGF-----DELLR 212          
BLAST of Gcaud2389.t1 vs. uniprot
Match: K8EIK8_9CHLO (HAD_SAK_1 domain-containing protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EIK8_9CHLO)

HSP 1 Score: 79.7 bits (195), Expect = 6.810e-15
Identity = 63/168 (37.50%), Postives = 82/168 (48.81%), Query Frame = 0
Query:   23 LHVFDFDGTLVRTPGPEEGKRRYTLETGHVWTG-GWWGRPGSLMPPVVESPFPASRVVRTVFEQMEEVITRSQTAVGVVVTGRIKPVREPVLRILDEICIAAKNDTVAPGESFLDHDAVITHPGGRRTTLEFK-EDLFRQLVTDGPLASCPLKELHIWEDRQIHAEAF 188
            L V+DFDGTLV TP P EGK  Y  + G  W   GWWGR  SL PP+   P PA       +    E  TR+   V +++TGR++ +   V   L  +  A         E+   H+ V     G   TLE+K E+L R +   GP      K++ IWEDR  HAE F
Sbjct:   32 LLVYDFDGTLVNTPTPREGKIMYENKIGQAWPHVGWWGRQESLEPPLEVGPGPA-------WASYVENRTRTD-CVRIMMTGRVEKLSRRVTECLRMLEGAT--------ETLCFHELVFKKGNG--DTLEYKCEELRRMVRAYGP------KKVRIWEDRVKHAEGF 175          
BLAST of Gcaud2389.t1 vs. uniprot
Match: A0A7S0N596_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N596_9CHLO)

HSP 1 Score: 72.0 bits (175), Expect = 6.500e-13
Identity = 43/102 (42.16%), Postives = 57/102 (55.88%), Query Frame = 0
Query:   16 KAGPIHSLHVFDFDGTLVRTPGPEEGKRRYTLETGHVWT-GGWWGRPGSLMPPVVESPFPASRVVRTVFEQMEEVITRSQTAVGVVVTGRIKPVREPVLRIL 116
            +A P+ ++HVFDFDGTLV TPGP +G R Y   T   W   GWWGR  SL PP+   PFP    +    +    V T     + V++TGR+  ++ PV  IL
Sbjct:    1 RAAPVRAVHVFDFDGTLVCTPGPADGDRLYRQATRCRWPFAGWWGRAESLSPPL-PVPFPPGPAMEAWRQSAGRVGT-----LAVMMTGRLGTLKAPVEAIL 96          
The following BLAST results are available for this feature:
BLAST of Gcaud2389.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3J275_9FLOR5.310e-13587.85HAD_SAK_1 domain-containing protein n=1 Tax=Gracil... [more]
R7Q5J8_CHOCR3.310e-9967.29HAD_SAK_1 domain-containing protein n=1 Tax=Chondr... [more]
M2W4C9_GALSU1.340e-1830.92HAD_SAK_1 domain-containing protein n=1 Tax=Galdie... [more]
A0A7S0Z793_9CHLO2.360e-1735.48Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]
A0A5J4YT13_PORPP1.360e-1635.87HAD_SAK_1 domain-containing protein n=1 Tax=Porphy... [more]
K8EIK8_9CHLO6.810e-1537.50HAD_SAK_1 domain-containing protein n=1 Tax=Bathyc... [more]
A0A7S0N596_9CHLO6.500e-1342.16Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018812Swiss Army Knife RNA repair protein, HAD domainPFAMPF10307HAD_SAK_1coord: 54..211
e-value: 6.7E-8
score: 32.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_830_length_17382_cov_5.634087contigNODE_830_length_17382_cov_5.634087:16164..16808 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2389.t1Gcaud2389.t1Gracilaria caudata M_176_S67 malemRNANODE_830_length_17382_cov_5.634087 16164..16808 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2389.t1 ID=Gcaud2389.t1|Name=Gcaud2389.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=215bp
MDLPPRLARALKLHRKAGPIHSLHVFDFDGTLVRTPGPEEGKRRYTLETG
HVWTGGWWGRPGSLMPPVVESPFPASRVVRTVFEQMEEVITRSQTAVGVV
VTGRIKPVREPVLRILDEICIAAKNDTVAPGESFLDHDAVITHPGGRRTT
LEFKEDLFRQLVTDGPLASCPLKELHIWEDRQIHAEAFATDLNDELLKLK
TIKTTVHLVTAETP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018812SAK_HAD