Gcaud2384.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2384.t1
Unique NameGcaud2384.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length199
Homology
BLAST of Gcaud2384.t1 vs. uniprot
Match: A0A2V3J276_9FLOR (Probable ATP-dependent transporter ycf16 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J276_9FLOR)

HSP 1 Score: 282 bits (722), Expect = 1.430e-94
Identity = 138/196 (70.41%), Postives = 168/196 (85.71%), Query Frame = 0
Query:    1 MILGQNGSGKSTLLRILRGVLSPSTGDVHLEKPCAYVQQNPDLQILLPTIGTDIAFSMPKNPKTRPSEVRQAVINALDAVGLTPPEDFLRKSSYRLSGGQRQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRNIVTERSMAAIWVTHLLDELDYADSIAIMNNGNIVAHGPRVAMMPLVLDLQDEVEHS 196
            MILG+NGSGKSTLLRILRG+L+PS+G V+LEKPCA+VQQ+P++QIL+PTIG DIA S+PK P T  SE+  AV  AL  VGL PPE F+R SSYRLSGGQRQRAA+AAALAM+P++ L DEVTASMDP NKAEL+SR+R ++T+R++ AIWVTHLLDEL++AD+IAIM  G I+A GPR+AMMPLV D+QD VEH 
Sbjct:    1 MILGKNGSGKSTLLRILRGLLNPSSGHVYLEKPCAFVQQDPNIQILMPTIGMDIAVSVPKKPDTSRSELWGAVREALTEVGLVPPEYFMRMSSYRLSGGQRQRAAVAAALAMKPKSFLLDEVTASMDPLNKAELISRVRRLITDRNIGAIWVTHLLDELEFADNIAIMGEGRILAQGPRIAMMPLVYDMQDNVEHE 196          
BLAST of Gcaud2384.t1 vs. uniprot
Match: R7Q7C5_CHOCR (Probable ATP-dependent transporter ycf16 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7C5_CHOCR)

HSP 1 Score: 258 bits (660), Expect = 4.120e-84
Identity = 121/193 (62.69%), Postives = 158/193 (81.87%), Query Frame = 0
Query:    1 MILGQNGSGKSTLLRILRGVLSPSTGDVHLEKPCAYVQQNPDLQILLPTIGTDIAFSMPKNPKTRPSEVRQAVINALDAVGLTPPEDFLRKSSYRLSGGQRQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRNIVTERSMAAIWVTHLLDELDYADSIAIMNNGNIVAHGPRVAMMPLVLDLQDEV 193
            M++G NG GKSTLLR++RG+L PS G V L  PCA+V QNPD+Q+L P++ TDIA S+PK P     E+R +VI A++AVGL+PPE ++R S++RLSGGQRQRA +A+ALAM P T+LFDE TASMDP N+AELV+R+R +V+ERS+AA+WVTHLL+ELD AD+I +M  G I AHGPRVAMMPL+ ++QD+V
Sbjct:   75 MLVGPNGCGKSTLLRVVRGLLIPSYGSVQLSTPCAFVHQNPDVQMLFPSVATDIAASVPKRPDMPVDEIRDSVIEAMEAVGLSPPEKYMRLSAHRLSGGQRQRAVVASALAMRPTTMLFDEATASMDPVNRAELVARVRRVVSERSIAALWVTHLLEELDVADTIIVMRGGKITAHGPRVAMMPLIYEMQDQV 267          
BLAST of Gcaud2384.t1 vs. uniprot
Match: A0A1E5QCU2_9CYAN (LuxR family transcriptional regulator n=1 Tax=Desertifilum sp. IPPAS B-1220 TaxID=1781255 RepID=A0A1E5QCU2_9CYAN)

HSP 1 Score: 171 bits (434), Expect = 1.800e-50
Identity = 89/190 (46.84%), Postives = 123/190 (64.74%), Query Frame = 0
Query:    1 MILGQNGSGKSTLLRILRGVLSPSTGDVHLEKPCAYVQQNPDLQILLPTIGTDIAFSMPKNPKTRPSEVRQAVINALDAVGLTPPEDFLRKSSYRLSGGQRQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRNIVTERSMAAIWVTHLLDELDYADSIAIMNNGNIVAHGPRVAMMPLVLDLQ 190
            M+LG NGSGKSTLLR+L G+L P +G+  + KP  +V QNPD Q+++PT+G D+AF + +   + P ++RQ V  AL AV L    D  R+  Y LSGGQ+QR AIA A+A     +L DE TA +DP ++ ELVS++R +V  R + A+WVTH LDELDY D   ++ NG +V  G R  M   + + Q
Sbjct:   36 MLLGTNGSGKSTLLRVLAGLLHPQSGEREILKPVGFVFQNPDHQLVMPTVGADVAFGLVEEKLSTP-QIRQRVEEALSAVNLL---DLQRRPIYALSGGQKQRIAIAGAIARHCEVLLLDEPTALLDPDSQRELVSQVRRLVNSRGLTALWVTHRLDELDYCDGAFLLENGQVVDRGDREKMQRRMTETQ 221          
BLAST of Gcaud2384.t1 vs. uniprot
Match: A0A3M1T3B9_9CYAN (ATP-binding cassette domain-containing protein n=1 Tax=Cyanobacteria bacterium J055 TaxID=2420338 RepID=A0A3M1T3B9_9CYAN)

HSP 1 Score: 171 bits (433), Expect = 2.780e-50
Identity = 85/177 (48.02%), Postives = 120/177 (67.80%), Query Frame = 0
Query:    1 MILGQNGSGKSTLLRILRGVLSPSTGDVHLEKPCAYVQQNPDLQILLPTIGTDIAFSMPKNPKTRPSEVRQAVINALDAVGLTPPEDFLRKSSYRLSGGQRQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRNIVTERSMAAIWVTHLLDELDYADSIAIMNNGNIVAHG 177
            M+LG NGSGKSTLLR+L G+L P +GD+ +++P  +V QNPD Q+++PT+G D+AF +    K  P +V   V  ALD V L    D  R+  Y LSGGQ+QR AIA A+A     +L DE TA +DP ++ +LV ++R IVTER++ A+WVTH L+ELDY D + +++ G +V  G
Sbjct:   42 MLLGTNGSGKSTLLRLLAGLLRPHSGDIQIQQPVGFVFQNPDCQLVMPTVGADVAFGLVAE-KLTPRQVHDRVAEALDLVNLL---DLYRRPIYALSGGQKQRVAIAGAIARHCEVLLLDEPTALLDPDSQLDLVRQVRRIVTERNLTALWVTHRLNELDYCDGVFLLDRGEVVDWG 214          
BLAST of Gcaud2384.t1 vs. uniprot
Match: A0A8J7BZK8_9CYAN (Energy-coupling factor ABC transporter ATP-binding protein n=1 Tax=Iningainema tapete BLCC-T55 TaxID=2748662 RepID=A0A8J7BZK8_9CYAN)

HSP 1 Score: 169 bits (427), Expect = 2.180e-49
Identity = 87/193 (45.08%), Postives = 127/193 (65.80%), Query Frame = 0
Query:    1 MILGQNGSGKSTLLRILRGVLSPSTGDVHLEKPCAYVQQNPDLQILLPTIGTDIAFSMPKNPKTRPSEVRQAVINALDAVGLTPPEDFLRKSSYRLSGGQRQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRNIVTERSMAAIWVTHLLDELDYADSIAIMNNGNIVAHGPRVAMMPLVLDLQDEV 193
            M+LG NGSGKSTLLR++ G+L+P +G V +  P  +V QNPD Q+++PT+G D+AF + +  K  P+ VR  V  AL AV L P    LR+  Y LSGGQ+QR AIA ALA     +L DE TA +DP ++ +LV+ +RN+V +R + A+WVTH L+EL+Y D   ++  G++V  G    +   +++L +EV
Sbjct:   36 MLLGTNGSGKSTLLRLMAGLLTPQSGKVQIVPPIGFVFQNPDHQLVMPTVGADVAFGLVEE-KLSPTVVRARVEEALGAVNLQP---LLRRPIYALSGGQKQRVAIAGALARHSEVLLLDEPTALLDPDSQLDLVTSVRNLVKQRHITALWVTHRLEELNYCDGAFLLEKGSLVDQGEPERLKQCLMELHNEV 224          
BLAST of Gcaud2384.t1 vs. uniprot
Match: A0A846DRR5_9CYAN (ATP-binding cassette domain-containing protein n=1 Tax=Desertifilum sp. SIO1I2 TaxID=2607799 RepID=A0A846DRR5_9CYAN)

HSP 1 Score: 172 bits (437), Expect = 3.450e-49
Identity = 89/190 (46.84%), Postives = 123/190 (64.74%), Query Frame = 0
Query:    1 MILGQNGSGKSTLLRILRGVLSPSTGDVHLEKPCAYVQQNPDLQILLPTIGTDIAFSMPKNPKTRPSEVRQAVINALDAVGLTPPEDFLRKSSYRLSGGQRQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRNIVTERSMAAIWVTHLLDELDYADSIAIMNNGNIVAHGPRVAMMPLVLDLQ 190
            M+LG NGSGKSTLLR+L G+L P +G+  + KP  +V QNPD Q+++PT+G D+AF + +   + P ++RQ V  AL AV L    D  R+  Y LSGGQ+QR AIA A+A     +L DE TA +DP ++ ELVS++R +V  R + A+WVTH LDELDY D   ++ NG +V  G R  M   + + Q
Sbjct:  184 MLLGTNGSGKSTLLRVLAGLLHPQSGETEILKPVGFVFQNPDHQLVMPTVGADVAFGLVEEKLSTP-QIRQRVEEALSAVNLL---DLQRRPIYALSGGQKQRIAIAGAIARHCEVLLLDEPTALLDPDSQRELVSQVRRLVNSRGLTALWVTHRLDELDYCDGAFLLENGQVVDRGDREKMQRRMTETQ 369          
BLAST of Gcaud2384.t1 vs. uniprot
Match: A0A5B8NLI5_9CHRO (Energy-coupling factor ABC transporter ATP-binding protein n=1 Tax=Euhalothece natronophila Z-M001 TaxID=522448 RepID=A0A5B8NLI5_9CHRO)

HSP 1 Score: 167 bits (424), Expect = 5.650e-49
Identity = 88/178 (49.44%), Postives = 118/178 (66.29%), Query Frame = 0
Query:    1 MILGQNGSGKSTLLRILRGVLSPSTGDVHLEKPCAYVQQNPDLQILLPTIGTDIAFSMPKNPKTRPSEVRQAVINALDAVGLTPPEDFLRKSSYRLSGGQRQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRNIVTERSMAAIWVTHLLDELDYADSIAIMNNGNIVAHGP 178
            M+LG NGSGKSTLL+IL G+LSP +G+ ++++P  +V QNPD Q+++PT+G D+AF +     + P +VR  V  AL AV L   E   R+  Y LSGGQ+QR AIA A+A     +L DE TA +DP  + ELV ++R++V  R M A+WVTH LDELDY D   I+  GNI   GP
Sbjct:   36 MLLGNNGSGKSTLLKILSGLLSPQSGECYVQQPLGFVFQNPDHQLVMPTVGADVAFGLVSEGLSWP-QVRDRVQEALSAVNLLGWE---RRPIYALSGGQKQRIAIAGAIARHCPVLLLDEPTALLDPETQGELVEQVRSLVKSRGMTALWVTHRLDELDYCDRAFILEEGNITKEGP 209          
BLAST of Gcaud2384.t1 vs. uniprot
Match: A0A1Z4RW46_9CHRO (ABC transporter-related protein n=1 Tax=Chondrocystis sp. NIES-4102 TaxID=2005460 RepID=A0A1Z4RW46_9CHRO)

HSP 1 Score: 167 bits (424), Expect = 7.160e-49
Identity = 87/190 (45.79%), Postives = 126/190 (66.32%), Query Frame = 0
Query:    1 MILGQNGSGKSTLLRILRGVLSPSTGDVHLEKPCAYVQQNPDLQILLPTIGTDIAFSMPKNPKTRPSEVRQAVINALDAVGLTPPEDFLRKSSYRLSGGQRQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRNIVTERSMAAIWVTHLLDELDYADSIAIMNNGNIVAHGPRVAMMPLVLDLQ 190
            M+LG NGSGKSTLL++L G+L P TG + +     +V QNPD Q+++PT+G DIAF +  + K  P +V+Q V  AL+AV L    D  R+  + LSGGQ+QR AIA A+A   + ILFDE TA +DP  + ELV+++RN+V + ++ A+WVTH L+ELDY D   ++  G ++A G   A+   +L L+
Sbjct:   44 MLLGNNGSGKSTLLKLLAGLLIPDTGSIVMPYKMGFVFQNPDHQLVMPTVGADIAFGL-VSEKLSPIQVKQRVREALEAVNLL---DLERRPIHALSGGQKQRIAIAGAIARNCQVILFDEPTALLDPDTQLELVAQVRNLVKQHNLTALWVTHRLEELDYCDGAFLLEGGRVIAQGEPEALKQKLLSLE 229          
BLAST of Gcaud2384.t1 vs. uniprot
Match: A0YWV2_LYNSP (ABC transporter-like protein n=3 Tax=Oscillatoriaceae TaxID=1892254 RepID=A0YWV2_LYNSP)

HSP 1 Score: 166 bits (421), Expect = 2.090e-48
Identity = 84/177 (47.46%), Postives = 128/177 (72.32%), Query Frame = 0
Query:    1 MILGQNGSGKSTLLRILRGVLSPSTGDVHLEKPCAYVQQNPDLQILLPTIGTDIAFSMPKNPKTRPSEVRQAVINALDAVGLTPPEDFLRKSSYRLSGGQRQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRNIVTERSMAAIWVTHLLDELDYADSIAIMNNGNIVAHG 177
            M+LG NGSGKSTLLR+L G+L+  +GD+ L+    +V QNPD Q+++P++G D+AF + ++  +  +EVRQ V++AL AV L   ++  R+  Y LSGGQ+QR AIA ALA + + +LFDE TA +DP ++ +LVS++R++V  R + A+WVTH L+ELDY+D   +++ G +VA G
Sbjct:   44 MLLGTNGSGKSTLLRLLAGLLASQSGDIALQGRVGFVFQNPDHQLVMPSVGADVAFGLVEDQLSL-TEVRQRVVDALSAVKL---QELQRRPIYALSGGQKQRIAIAGALARQCQVLLFDEPTALLDPDSQLDLVSQVRSLVKSRGITALWVTHRLNELDYSDGAFLLSGGRVVAQG 216          
BLAST of Gcaud2384.t1 vs. uniprot
Match: A0A563VXV3_9CYAN (Polyamine-transporting ATPase n=1 Tax=Hyella patelloides LEGE 07179 TaxID=945734 RepID=A0A563VXV3_9CYAN)

HSP 1 Score: 166 bits (420), Expect = 2.410e-48
Identity = 90/177 (50.85%), Postives = 116/177 (65.54%), Query Frame = 0
Query:    1 MILGQNGSGKSTLLRILRGVLSPSTGDVHLEKPCAYVQQNPDLQILLPTIGTDIAFSMPKNPKTRPSEVRQAVINALDAVGLTPPEDFLRKSSYRLSGGQRQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRNIVTERSMAAIWVTHLLDELDYADSIAIMNNGNIVAHG 177
            M+LG NGSGKSTLLR++ G+LSP +G V +  P  +V QNPD Q+++PT+  DIAF + K  K    EVR  V  AL AV L   E   R+  Y LSGGQ+QR AIA ALA    TILFDE TA +D   + ELV +++N+V  R + A+WVTH L+ELDY D   ++ NG +VA G
Sbjct:   37 MLLGNNGSGKSTLLRLIAGLLSPDSGGVKINSPFGFVFQNPDRQLVMPTVAADIAFGLVKE-KLSIVEVRDRVREALAAVNLLELE---RRPIYALSGGQKQRIAIAGALARHCHTILFDEPTALLDGDTQIELVEQVQNLVKTRGLTALWVTHRLEELDYCDGAFLLENGRVVAQG 209          
The following BLAST results are available for this feature:
BLAST of Gcaud2384.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J276_9FLOR1.430e-9470.41Probable ATP-dependent transporter ycf16 n=1 Tax=G... [more]
R7Q7C5_CHOCR4.120e-8462.69Probable ATP-dependent transporter ycf16 n=1 Tax=C... [more]
A0A1E5QCU2_9CYAN1.800e-5046.84LuxR family transcriptional regulator n=1 Tax=Dese... [more]
A0A3M1T3B9_9CYAN2.780e-5048.02ATP-binding cassette domain-containing protein n=1... [more]
A0A8J7BZK8_9CYAN2.180e-4945.08Energy-coupling factor ABC transporter ATP-binding... [more]
A0A846DRR5_9CYAN3.450e-4946.84ATP-binding cassette domain-containing protein n=1... [more]
A0A5B8NLI5_9CHRO5.650e-4949.44Energy-coupling factor ABC transporter ATP-binding... [more]
A0A1Z4RW46_9CHRO7.160e-4945.79ABC transporter-related protein n=1 Tax=Chondrocys... [more]
A0YWV2_LYNSP2.090e-4847.46ABC transporter-like protein n=3 Tax=Oscillatoriac... [more]
A0A563VXV3_9CYAN2.410e-4850.85Polyamine-transporting ATPase n=1 Tax=Hyella patel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..196
e-value: 2.8E-45
score: 156.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..178
IPR003439ABC transporter-like, ATP-binding domainPFAMPF00005ABC_trancoord: 2..124
e-value: 2.9E-20
score: 73.2
IPR003439ABC transporter-like, ATP-binding domainPROSITEPS50893ABC_TRANSPORTER_2coord: 1..195
score: 13.992414
NoneNo IPR availablePANTHERPTHR43514:SF4ABC TRANSPORTER I FAMILY MEMBER 10coord: 1..183
NoneNo IPR availablePANTHERPTHR43514ABC TRANSPORTER I FAMILY MEMBER 10coord: 1..183
IPR017871ABC transporter-like, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 96..110
IPR015856ABC transporter, CbiO/EcfA subunitCDDcd03225ABC_cobalt_CbiO_domain1coord: 1..171
e-value: 1.18878E-46
score: 150.695

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_830_length_17382_cov_5.634087contigNODE_830_length_17382_cov_5.634087:2939..3863 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2384.t1Gcaud2384.t1Gracilaria caudata M_176_S67 malemRNANODE_830_length_17382_cov_5.634087 2939..3863 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2384.t1 ID=Gcaud2384.t1|Name=Gcaud2384.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=199bp
MILGQNGSGKSTLLRILRGVLSPSTGDVHLEKPCAYVQQNPDLQILLPTI
GTDIAFSMPKNPKTRPSEVRQAVINALDAVGLTPPEDFLRKSSYRLSGGQ
RQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRNIVTERSMAAI
WVTHLLDELDYADSIAIMNNGNIVAHGPRVAMMPLVLDLQDEVEHSQP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003439ABC_transporter-like_ATP-bd
IPR017871ABC_transporter-like_CS
IPR015856ABC_transpr_CbiO/EcfA_su