Gcaud2376.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2376.t1
Unique NameGcaud2376.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length148
Homology
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BLAST of Gcaud2376.t1 vs. uniprot
Match: A0A2V3IQ73_9FLOR (CULLIN_2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ73_9FLOR)

HSP 1 Score: 79.7 bits (195), Expect = 1.470e-14
Identity = 46/136 (33.82%), Postives = 82/136 (60.29%), Query Frame = 0 
Query:    6 EQYKQEKIRVRQALISLSSENAPLLFCEIGSEGHEIRFKLNEDWRTSKIEGLLGLYFDAYISSLDRKQERKIRGSVEKSILKRITRDRSSPQEIQIVIDHVLAARIHRRINEKYVRKCIQGLMNSLRIV-EENGVL 140
            E Y  EK+R+RQA++SL+S++ PLL    G EG   +F LN  + +++   ++  Y DAY+ SLDR  E K+R  ++  ++  ++ +R  P+E   ++  ++   +H  I E +VR+ +Q L ++ RIV ++ G L
Sbjct:  686 EDYDNEKVRIRQAVLSLTSQSWPLLVQHEGREGSSSKFSLNTAFYSTQDLDIVQSYQDAYLFSLDRTDEWKVRQMIDPVVMNFVSGNRHIPREA--LVSKMMQEWLHPLITEDFVRRVVQQLTDAGRIVLDDEGKL 819
The following BLAST results are available for this feature:
BLAST of Gcaud2376.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQ73_9FLOR1.470e-1433.82CULLIN_2 domain-containing protein n=1 Tax=Gracila... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_3530_length_3313_cov_5.081006contigNODE_3530_length_3313_cov_5.081006:2..445 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2376.t1Gcaud2376.t1Gracilaria caudata M_176_S67 malemRNANODE_3530_length_3313_cov_5.081006 2..445 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2376.t1 ID=Gcaud2376.t1|Name=Gcaud2376.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=148bp
DDITDEQYKQEKIRVRQALISLSSENAPLLFCEIGSEGHEIRFKLNEDWR
TSKIEGLLGLYFDAYISSLDRKQERKIRGSVEKSILKRITRDRSSPQEIQ
IVIDHVLAARIHRRINEKYVRKCIQGLMNSLRIVEENGVLRLNTQFF*
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