Gcaud2374.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2374.t1
Unique NameGcaud2374.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length219
Homology
BLAST of Gcaud2374.t1 vs. uniprot
Match: A0A2V3II38_9FLOR (Copine-5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II38_9FLOR)

HSP 1 Score: 230 bits (586), Expect = 7.150e-68
Identity = 118/187 (63.10%), Postives = 133/187 (71.12%), Query Frame = 0
Query:   53 GIGDFLGQVKTRLFELVTKQDNNLKLADRTFKPGNYGILKITTHDDSLSTKVRVTFQFSGKKLDKKDLFGLSDPYFKIYMREKTRNSAIYRSQYIRKNLNPVWSPDKFLLLTNGEAWCQ---------------------ARFTLEQLKNASSFPLVNPKKVNRPRYVNSGELIVHRVDVVQMPTFT 218
            G GDFLGQV T L ELVTK  + L LADRT +PGN+G+L +  HD+S STKVRV  QF+GKKLDKKDLFG SDPYFKIY     RNSA+Y+S YI K LNP W+PD F+L T+GE W Q                     A F+L +LKNASSFPL+NPKKVNRPRYVNSGELIVH VD VQMPTFT
Sbjct:  279 GRGDFLGQVVTNLAELVTKGTSQLTLADRTGRPGNFGVLIVDAHDESQSTKVRVKVQFAGKKLDKKDLFGKSDPYFKIYYITNNRNSAVYKSAYIPKTLNPAWTPDSFMLHTHGEPWDQVKLRCEVFDYDRYTPHDLIGIAEFSLARLKNASSFPLINPKKVNRPRYVNSGELIVHNVDPVQMPTFT 465          
BLAST of Gcaud2374.t1 vs. uniprot
Match: R7QI63_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI63_CHOCR)

HSP 1 Score: 112 bits (281), Expect = 3.930e-25
Identity = 80/234 (34.19%), Postives = 109/234 (46.58%), Query Frame = 0
Query:   14 MFSGRNTVHEKIQAFQAAKSPGK-FTFQAGRADRVLSLAIGI-----GDFLGQVKTRLFELVTKQDNNLKLADRTFKPGNYGILKITTHDDSLSTKVRVTFQFSGKKLDKKDLFGLSDPYFKI--YMREKTRNSAIYRSQYIRKNLNPVWSPDKFLLLTNGEAWC---------------------QARFTLEQLKNASSFPLVNPKKVNRP-RYVNSGELIVHRVDVVQMPTF 217
            + +GR  V E   A   AK     F F+  +  R L + +       GD LG   T L E+V      LKL          G L +  HDDS + KVR+    SG  LDKKD+FG SDPY+++   +      S +Y+S+ I+ NLNP W P   LL   G +W                      +A+F+L +L +   F L+NPKK  +   Y NSG L VHR D V++P F
Sbjct:  223 IIAGRTEVAENTLAPTWAKRVQMPFHFEQHQVIRFLVIDVDNKKTLQGDGLGHCITSLAEIVRNGVLTLKLYSSRGASAKCGDLIVRAHDDSPAGKVRLKLALSGAGLDKKDMFGKSDPYYELRQIIAGNRGTSTLYKSEVIKNNLNPTWEPHSLLLSPGGMSWDRVQLQIIVNDWDKYTPHDLIGEAKFSLAELTSKPLFDLINPKKALKGGSYKNSGRLKVHRADAVELPNF 456          
BLAST of Gcaud2374.t1 vs. uniprot
Match: A0A812EAV2_SEPPH (Copine-7,Copine-B,Copine-3,Copine-A,Copine-8,Copi ne-9,Copine-2,Nicotinic receptor-associated protein 1,Copine-6,Copine-5,Copine-4,Copine-1 n=2 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812EAV2_SEPPH)

HSP 1 Score: 87.8 bits (216), Expect = 1.720e-16
Identity = 56/188 (29.79%), Postives = 99/188 (52.66%), Query Frame = 0
Query:   56 DFLGQVKTRLFELVTKQDNNLKLADRTFKPGNYGILKITTHDDSLSTKVRVTFQFSGKKLDKKDLFGLSDPYFKIYMREKTRNSAIYRSQYIRKNLNPVWSPD--KFLLLTNGEAWCQARF-------------------TLEQLKNAS----SFPLVNPKKV-NRPRYVNSGELIVHRVDVVQMPTF 217
            DFLG+++  L ++V+          +T   G  G + ++  + S + ++ +TF FSG+ LDKKD FGLSDPY +I+ + ++    ++R++ I+ NLNP W P   K   L  G+   + +                    TL  ++ A+    S+PL+NPKK   +  Y NSG+L++  + V+++ +F
Sbjct:  112 DFLGEIECSLGQVVSCSP-----FTKTLSRGGSGSITVSAEELSEAGEI-ITFNFSGENLDKKDFFGLSDPYIEIFRQTQSNWQLVHRTEVIKNNLNPKWKPFELKAQTLCKGDRQLKIKIDCYDWDSDGSHDFIGSCVTTLGDMEKATDKSLSWPLMNPKKAAKKSSYKNSGKLVLRSIRVMKLTSF 293          
BLAST of Gcaud2374.t1 vs. uniprot
Match: A0A7S4NWM4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NWM4_9EUKA)

HSP 1 Score: 86.7 bits (213), Expect = 4.570e-16
Identity = 59/190 (31.05%), Postives = 98/190 (51.58%), Query Frame = 0
Query:   56 DFLGQVKTRLFELVTKQDNNLKLADRTFKPGNYGILKITTHDDSLSTKVRVTFQFSGKKLDKKDLFGLSDPYFKIYMREKTRNS--AIYRSQYIRKNLNPVWSPDKFLL--LTNGEAWCQARF-------------------TLEQLKN----ASSFPLVNPK-KVNRPRYVNSGELIVHRVDVVQMPTF 217
            D +G+  T + ++V+ +   +    +  +    G + ++  ++    K+    +FSGK LDKKD FG SDP+F+I  R K   S  A+Y+S YIRK LNPVW P +  +  L NG+     +F                   +L++++N     SS  L+NP  K  + RYVNSG +++ + ++ + PTF
Sbjct:  115 DLIGEAFTTIGDIVSAKGQTITKPLQAPRRRRNGHITVSA-EEVKQMKLAAKLRFSGKNLDKKDFFGKSDPFFRI-SRAKEGGSWDAVYKSDYIRKTLNPVWLPFELPVQKLNNGDMDRPLKFDVYDWNSNGKEDFIGSFTMSLKEMENYAKSGSSINLINPAIKKKKSRYVNSGVILIQQCEIYEAPTF 302          
BLAST of Gcaud2374.t1 vs. uniprot
Match: A0A6A7G5X7_9CRUS (Copine-8-like isoform X1 n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G5X7_9CRUS)

HSP 1 Score: 82.8 bits (203), Expect = 8.860e-15
Identity = 66/188 (35.11%), Postives = 91/188 (48.40%), Query Frame = 0
Query:   56 DFLGQVKTRLFELVTKQDNNLKLADRTFKPGNYGILKITTHDDSLSTKVRVTFQFSGKKLDKKDLFGLSDPYFKIYMREKTRN--SAIYRSQYIRKNLNPVWSPDKF--LLLTNGEAWCQARF-------------------TLEQLKNASS--FPLVNPKK-VNRPRYVNSGELIVHRVDVVQMPTF 217
            D LG  +  L E++      L    RT   G  GI+ I   + + S +V VT   SG  LDKKD+FG SDP+  I     + N  SA++R++Y+RK LNPVW P      LL  G+     +                    TL+QLK+ SS  F L+NPKK   +  Y +SG L+V+   V   P+F
Sbjct:  108 DKLGWTEVTLAEIMASGGAQLS---RTLNKGGGGIILIAGEEMANSKEV-VTLSLSGSGLDKKDMFGKSDPFLIISRAAGSNNHYSAVHRTEYLRKTLNPVWKPIVIPARLLCGGDDERSLKIECFDWDSDGTHDFIGECFTTLQQLKSGSSKSFALINPKKKAKKSSYKDSGSLLVNACKVHIEPSF 291          
BLAST of Gcaud2374.t1 vs. uniprot
Match: A0A293LLQ9_ORNER (Uncharacterized protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293LLQ9_ORNER)

HSP 1 Score: 80.1 bits (196), Expect = 7.480e-14
Identity = 57/184 (30.98%), Postives = 89/184 (48.37%), Query Frame = 0
Query:   56 DFLGQVKTRLFELVTKQDNNLKLADRTFKPGNYGILKITTHDDSLSTKVRVTFQFSGKKLDKKDLFGLSDPYFKIYMREKTRN-SAIYRSQYIRKNLNPVWSPDKFL--LLTNGEAWCQARF-------------------TLEQLKNASSFPLVNPKKVNRPRYVNSGELIVHRVDVVQMPTF 217
            DFLG ++  L E+V+ Q  +     R     N G + +   + S S K  +T Q+  +KLDKKD FG SDP+   Y   +  + SA++R++ I++NL+P W P +    +L   +   Q +                    TL QL+       +NPKKV +  Y NSG +I+    +V+ PTF
Sbjct:  105 DFLGFMECTLGEVVSVQGTSFTRPLRDHGNRNCGTITVIAEEVS-SCKQVITMQWQARKLDKKDFFGKSDPFIIFYKSNEDGSFSAVWRTEVIKRNLSPTWQPFRIKNSVLCGADMDRQIKVECYDWDSDGGHDLIGSFSCTLRQLQQGR----INPKKVGKKGYKNSGTVILMSCAIVEEPTF 283          
BLAST of Gcaud2374.t1 vs. uniprot
Match: UPI001898313D (copine-8-like n=2 Tax=Rhipicephalinae TaxID=426437 RepID=UPI001898313D)

HSP 1 Score: 79.7 bits (195), Expect = 1.010e-13
Identity = 44/103 (42.72%), Postives = 62/103 (60.19%), Query Frame = 0
Query:   56 DFLGQVKTRLFELVTKQDNNLKLADRTFKPGNYGILKITTHDDSLSTKVRVTFQFSGKKLDKKDLFGLSDPYFKIY-MREKTRNSAIYRSQYIRKNLNPVWSP 157
            DFLGQV   L ELV  Q   +KL   +  PGN G + +T  ++ L  K  V  Q+ GKKLDKKD FG SDP+ + Y + E    +A++R++ +++ LNP W P
Sbjct:  105 DFLGQVNCTLGELVAYQGTQVKLQ-LSGLPGNCGTILLTV-EEVLDCKRMVDMQWQGKKLDKKDWFGKSDPFLEFYRVSEDNSYTAVFRTEVVKRKLNPTWRP 205          
BLAST of Gcaud2374.t1 vs. uniprot
Match: A0A3Q1F9I8_9TELE (Copine-3-like n=10 Tax=Pomacentridae TaxID=30863 RepID=A0A3Q1F9I8_9TELE)

HSP 1 Score: 79.3 bits (194), Expect = 1.380e-13
Identity = 55/189 (29.10%), Postives = 92/189 (48.68%), Query Frame = 0
Query:   56 DFLGQVKTRLFELVTKQDNNLKLADRTFKPGNYGILKITTHDDSLSTKVRVTFQFSGKKLDKKDLFGLSDPYFKIYMREKTRNSAIYRSQYIRKNLNPVWSPDKFLL--LTNGEAWCQARF-------------------TLEQLKNASS-----FPLVNPKKVNRPR-YVNSGELIVHRVDVVQMPTF 217
            DFLG+++  L ++V+ +     L  +  +P   G + I   ++    +V V F+ +G+KLDKKD FG SDP+ + Y + +T     +R++ I+ NLNP W P +  L  L  G+     +                    TL Q++ AS      F  +N KK  + + Y NSG ++V +  +V+  TF
Sbjct:  102 DFLGELECTLGQIVSSRKITRPLVKKDKRPAGRGTITICA-EERTDNRV-VAFEAAGRKLDKKDFFGKSDPFLEFYRQTETGWQLAHRTEVIKNNLNPTWRPFRIPLQSLCGGDVEKSIKVDCYDYNNSGSHDFIGSFQTTLSQIQQASQTYAAEFECINSKKKQKKKGYKNSGVIVVKQCKIVKEYTF 288          
BLAST of Gcaud2374.t1 vs. uniprot
Match: A0A8J1T4J4_OWEFU (Ofus.G01353 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1T4J4_OWEFU)

HSP 1 Score: 78.6 bits (192), Expect = 2.520e-13
Identity = 59/189 (31.22%), Postives = 93/189 (49.21%), Query Frame = 0
Query:   56 DFLGQVKTRLFELVTKQDNNLKLADRTFKPG-NYGILKITTHDDSLSTKVRVTFQFSGKKLDKKDLFGLSDPYFKIYMREKTRNSAI-YRSQYIRKNLNPVWSPDKFLLLT--NGEAWCQARF-------------------TLEQLK----NASSFPLVNPKKVNRPRYVNSGELIVHRVDVVQMPTF 217
            DFLG+++  L E+VT    + +L  R   P  + G + + T ++  + K  VT QF GKKLDKKDLFG SDP+   Y   +  N  + ++++ I+  LNP W P   L+ T  NG+     +                     L +L     +A+ F L++PKK  + +Y NSG + +    V Q+ +F
Sbjct:  102 DFLGKMECTLGEVVT----HARLQKRLQGPKKDSGSIILVTAEELSTCKEEVTMQFCGKKLDKKDLFGKSDPFLVFYKCNEDGNFTLTHKTEVIKNTLNPTWRPFTVLVRTLCNGDFHRSLKVECYDWNRSGDHDLIGGFVTNLHELTRGPGSANIFELIHPKKKEKKKYKNSGNIELMSCKVQQIHSF 286          
BLAST of Gcaud2374.t1 vs. uniprot
Match: A0A8B7NJG7_HYAAZ (copine-8-like isoform X1 n=3 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7NJG7_HYAAZ)

HSP 1 Score: 77.8 bits (190), Expect = 4.660e-13
Identity = 62/190 (32.63%), Postives = 92/190 (48.42%), Query Frame = 0
Query:   56 DFLGQVKTRLFELVTKQDNNLKLADRTFKPGNYGILKITTHDDSLSTKVRVTFQFSGKKLDKKDLFGLSDPYFKIYMREKTRN--SAIYRSQYIRKNLNPVWSPD--KFLLLTNGEAWCQARF-------------------TLEQLK--NASS--FPLVNPKK-VNRPRYVNSGELIVHRVDVVQMPTF 217
            D LG  +  L E++      L    RT   G  GI+ +   ++ + +K  VT  F+G  LDKKD+FG SDPY  +     + N  + ++R++YI+K L+PVW P   +  LL  G+     +                    TL +LK  N SS  + L+NPKK   +  Y NSG+L+V    V + PTF
Sbjct:  111 DKLGWTECTLAEIMASGGEPLT---RTLNDGKGGII-VVVGEEVVESKEVVTLSFAGSGLDKKDMFGKSDPYLVVSKSVGSNNQYTVVHRTEYIKKTLDPVWKPFVIRSSLLCGGDDQRPLKIECFDYDKDSEHDFIGECFTTLAKLKQGNVSSNHYDLINPKKKAKKSSYKNSGKLMVQLCTVHEEPTF 296          
The following BLAST results are available for this feature:
BLAST of Gcaud2374.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3II38_9FLOR7.150e-6863.10Copine-5 n=1 Tax=Gracilariopsis chorda TaxID=44838... [more]
R7QI63_CHOCR3.930e-2534.19Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A812EAV2_SEPPH1.720e-1629.79Copine-7,Copine-B,Copine-3,Copine-A,Copine-8,Copi ... [more]
A0A7S4NWM4_9EUKA4.570e-1631.05Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
A0A6A7G5X7_9CRUS8.860e-1535.11Copine-8-like isoform X1 n=2 Tax=Hirondellea gigas... [more]
A0A293LLQ9_ORNER7.480e-1430.98Uncharacterized protein (Fragment) n=1 Tax=Ornitho... [more]
UPI001898313D1.010e-1342.72copine-8-like n=2 Tax=Rhipicephalinae TaxID=426437... [more]
A0A3Q1F9I8_9TELE1.380e-1329.10Copine-3-like n=10 Tax=Pomacentridae TaxID=30863 R... [more]
A0A8J1T4J4_OWEFU2.520e-1331.22Ofus.G01353 protein n=1 Tax=Owenia fusiformis TaxI... [more]
A0A8B7NJG7_HYAAZ4.660e-1332.63copine-8-like isoform X1 n=3 Tax=Hyalella azteca T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 90..177
e-value: 1.6E-10
score: 42.9
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 85..169
IPR000008C2 domainPFAMPF00168C2coord: 111..156
e-value: 2.7E-6
score: 27.6
IPR000008C2 domainPROSITEPS50004C2coord: 87..218
score: 9.114981
IPR045052CopinePANTHERPTHR10857COPINEcoord: 51..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2154_length_6647_cov_5.294539contigNODE_2154_length_6647_cov_5.294539:260..1391 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2374.t1Gcaud2374.t1Gracilaria caudata M_176_S67 malemRNANODE_2154_length_6647_cov_5.294539 260..1391 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2374.t1 ID=Gcaud2374.t1|Name=Gcaud2374.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=219bp
MSEAEKSGGSPGGMFSGRNTVHEKIQAFQAAKSPGKFTFQAGRADRVLSL
AIGIGDFLGQVKTRLFELVTKQDNNLKLADRTFKPGNYGILKITTHDDSL
STKVRVTFQFSGKKLDKKDLFGLSDPYFKIYMREKTRNSAIYRSQYIRKN
LNPVWSPDKFLLLTNGEAWCQARFTLEQLKNASSFPLVNPKKVNRPRYVN
SGELIVHRVDVVQMPTFT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR000008C2_dom
IPR045052Copine