Gcaud2366.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2366.t1
Unique NameGcaud2366.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length306
Homology
BLAST of Gcaud2366.t1 vs. uniprot
Match: A0A2V3IRL8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRL8_9FLOR)

HSP 1 Score: 115 bits (287), Expect = 4.940e-25
Identity = 83/309 (26.86%), Postives = 158/309 (51.13%), Query Frame = 0
Query:    6 DTTSKTVPQSTIVGLEAPLLENIDVPSIALFLKERKIYERRVAEKNKEPGIQITPTSYKSSITDTVLEILIDGDYVDAASAENLSEDMLRKSLRKHSQLEFKKLRLDEWERIVSDVKMKMDL--SDARSRIWQLVVDYKEALRDAGYSAVIDGCPEIAIRHLRQRTEPVELHTHMEQIISMERSTRLHKSDFRKYAKRLAEEAQIVER--ARVGI-----LPPVFEDLDGSSKPRIEVTGESREKKRAADDAGHDDQEPVKKKRFCWNTEKCPNE----EHLLKNCPRTSPEERKRIWSRIRQEAQNRK 301
            +T + TV Q+ I  +EAP L +I      LF ++ ++YER++AEKN E GIQ+   +Y +SIT  VL+I +   +V   S E+++E  LR+ + + +Q+  ++  L + ER +  V+M  +   +    ++ +L + Y   L + GYS  I+  P++A+ H+ +R    +L   M   I + R     K +++ + + L +EA+ ++R  A  G+          +DL+    P+ +   + R +K+ A  +G + +    K +   +   C N      H +  CP TS E++K++ +   +  + RK
Sbjct:   13 ETPTDTVRQTIIESVEAPRLRDISTEDFVLFKQKLEVYERQIAEKNAESGIQVPLKTYWNSITKPVLDIFVTACWVPVESVEDITEQHLRQCVEEPAQVNPEEYNLAQIERDLKYVRMDKNTKSNSLEMQVLRLGLKYSTTLENLGYSEFIEKQPQLAVEHVIKRVTHEQLRKRMLLTIKL-RKEEGFKKNYKAFMRELLKEAKQIDRHEAAKGLKARSNFSDSDDDLEHKEGPKPDCANKDRRRKKGASGSGANGKSNAGKDKPKRDRTSCLNPVCDGHHYMNECPMTSDEDKKKLVAEYHEAKKARK 320          
BLAST of Gcaud2366.t1 vs. uniprot
Match: A0A2V3IG26_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG26_9FLOR)

HSP 1 Score: 105 bits (262), Expect = 3.350e-22
Identity = 61/208 (29.33%), Postives = 121/208 (58.17%), Query Frame = 0
Query:    6 DTTSKTVPQSTIVGLEAPLLENIDVPSIALFLKERKIYERRVAEKNKEPGIQITPTSYKSSITDTVLEILIDGDYVDAASAENLSEDMLRKSLRKHSQLEFKKLRLDEWERIVSDVKMKMDL--SDARSRIWQLVVDYKEALRDAGYSAVIDGCPEIAIRHLRQRTEPVELHTHMEQIISMERSTRLHKSDFRKYAKRLAEEAQIVER 211
            +T + TV ++ I  +EAP L++I      LF ++R++YER++AEKN E GIQ+  T+Y++SIT  VL++ +   +V   S E+++E  LR+ + + +++  ++  L + ER +  V+M  +   +    ++ +L + Y   L + GYS  I+  P++A++H+ +R    +L   M   I + R     K +++ + + L +EA+ ++R
Sbjct:   13 ETATDTVRKTIIESVEAPRLKDISTEDFVLFKQKREVYERKIAEKNAESGIQVPLTTYRNSITKPVLDMFVTACWVPVESVEDITEQHLRQCVEEQARVNPEEYDLAQIERDLKYVRMDKNTKSNSLDMQVLRLGLKYSTTLENLGYSEFIEKQPQLAVKHVIKRVTHEQLRKRMLLTIKL-RKKEGFKKNYKVFMRELVKEAKQIDR 219          
BLAST of Gcaud2366.t1 vs. uniprot
Match: A0A2V3IKC4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKC4_9FLOR)

HSP 1 Score: 71.6 bits (174), Expect = 3.570e-12
Identity = 36/91 (39.56%), Postives = 60/91 (65.93%), Query Frame = 0
Query:    6 DTTSKTVPQSTIVGLEAPLLENIDVPSIALFLKERKIYERRVAEKNKEPGIQITPTSYKSSITDTVLEILIDGDYVDAASAENLSEDMLRK 96
            +T + TV Q+ I  +EAP L++I      LF ++R++YER++AEKN E GIQ+  T+ ++SIT  VL++ +   +V   S E+++E  LR+
Sbjct:   13 ETATDTVRQTIIESVEAPRLKDISTEYFVLFKQKREVYERQIAEKNAELGIQVPLTTLRNSITKPVLDMFVTACWVAVDSVEDITEQHLRQ 103          
The following BLAST results are available for this feature:
BLAST of Gcaud2366.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IRL8_9FLOR4.940e-2526.86Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IG26_9FLOR3.350e-2229.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IKC4_9FLOR3.570e-1239.56Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..305

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_6000_length_1326_cov_4.778947contigNODE_6000_length_1326_cov_4.778947:78..995 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2366.t1Gcaud2366.t1Gracilaria caudata M_176_S67 malemRNANODE_6000_length_1326_cov_4.778947 78..995 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2366.t1 ID=Gcaud2366.t1|Name=Gcaud2366.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=306bp
MAEVGDTTSKTVPQSTIVGLEAPLLENIDVPSIALFLKERKIYERRVAEK
NKEPGIQITPTSYKSSITDTVLEILIDGDYVDAASAENLSEDMLRKSLRK
HSQLEFKKLRLDEWERIVSDVKMKMDLSDARSRIWQLVVDYKEALRDAGY
SAVIDGCPEIAIRHLRQRTEPVELHTHMEQIISMERSTRLHKSDFRKYAK
RLAEEAQIVERARVGILPPVFEDLDGSSKPRIEVTGESREKKRAADDAGH
DDQEPVKKKRFCWNTEKCPNEEHLLKNCPRTSPEERKRIWSRIRQEAQNR
KTTAE*
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