Gcaud2354.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2354.t1
Unique NameGcaud2354.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length384
Homology
BLAST of Gcaud2354.t1 vs. uniprot
Match: A0A2V3J058_9FLOR (Protein BCCIP-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J058_9FLOR)

HSP 1 Score: 320 bits (819), Expect = 9.660e-104
Identity = 183/385 (47.53%), Postives = 240/385 (62.34%), Query Frame = 0
Query:    1 MGKRKRNGEKRRANSSTENGAXXXXXRARAEETKDVDANCVHYASSSEEDSGKELLRETAKLFSVFDKDVCRSLGSDSXXXXXXXXXXXXXXXXEYMKDILLTRSKADESDVELSVEFFDPREDDVSALSMLLGKYSKACTSV-GKGKEQVTSSRALAKVVCAQTRVGTTIRLSDEDAPIGFISCINIREHAKMLKDLKRKLIQVAEKENNGRFITLLNKCMEGSGRFDSERMGLVLCERVMNMPTLVVGKMFEALCCEIEWATEDEKTQEQRASFKFGWYLYIAEVYCYEA----ERXXXXXXXXXXXXXXXXXXXXXXXXXIAFARVEDSEWHKHASCSVSWDWGGAEDGVKQRRMAMIVAAKKMATIREAVEQRVNGSSSGE 380
            MGKRKR     R + S +  A     +   + + D+D  C+HY SSS+E       +E  K  S          GSDS                E   +++LT +K+DESDVE++VEFFDPREDDV  + M LG+Y K CT+  GK +  VTS+RAL++ +C QTRVGT+IRL+DE+A IGF+SC+N+R H+ +L DLKRKL++VAE +    F+ L+NKCMEG+GRFDSERMGLVLCERV+N+P +VV K+ EAL CEIEWATEDE T+EQR  FKFGWY+YI EV+ Y      E                          +AF RVED  W +HA CS++WD G  E  V+++RMAMIVAAKK++ IR+AVE+ V    + E
Sbjct:    1 MGKRKR-----RTSKSKQAEANGTGKQKSEKASYDMDEECIHYHSSSDEKQ-----QEGTKGGS--------EAGSDSELD-------------ESGDELMLTHNKSDESDVEVNVEFFDPREDDVGTICMFLGRYVKECTAKSGKKESGVTSARALSEAICKQTRVGTSIRLTDEEAAIGFVSCLNMRNHSALLVDLKRKLVEVAENQKEETFVKLVNKCMEGTGRFDSERMGLVLCERVVNLPPMVVPKILEALFCEIEWATEDESTKEQRDEFKFGWYMYITEVFLYSEQGGDEAEGKGKEGQRTKRQRIGEKDGEGELRMAFGRVEDWVWAEHAKCSIAWDIGTEEKEVRRKRMAMIVAAKKVSKIRQAVERAVQSEEAVE 354          
BLAST of Gcaud2354.t1 vs. uniprot
Match: U5D053_AMBTC (Protein BCCIP homolog n=4 Tax=Amborella trichopoda TaxID=13333 RepID=U5D053_AMBTC)

HSP 1 Score: 105 bits (263), Expect = 3.340e-22
Identity = 63/179 (35.20%), Postives = 97/179 (54.19%), Query Frame = 0
Query:  112 VELSVEFFDPREDDVSALSMLLGKYSKACTSVGKGKEQVTSSRALAKVVCAQTRVGTTIRLSDEDAPIGFISCINIREHA--KMLKDLKRKLIQVA-EKENNGRFITLLNKCMEGSGRFDSERMGLVLCERVMNMPTLVVGKMFEALCCEIEWATEDEKTQEQRASFKFGWYLYIAEVY 287
            + + +EFFDP+ DD   L MLL  Y            +V        ++  QT VGT ++  D+ AP G IS IN+  +   + + DLK  L+ V  EK  + +   LL +  +G        +GL++ +RV+N+P  ++  +++AL  E+ WATEDE TQEQR SF+F +YL I  +Y
Sbjct:   73 INVDLEFFDPKPDDFHGLKMLLNNYLDV---------KVWDLSGFVDLILGQTTVGTVVKPGDDGAPFGVISAINLERYKDHRCIVDLKSFLLDVCHEKSISNQLKILLGEQAQG--------VGLLVSQRVVNLPLEILPPLYDALFDEVSWATEDEPTQEQRDSFQFKYYLIITRIY 234          
BLAST of Gcaud2354.t1 vs. uniprot
Match: A0A7S2T3X7_9CHLO (Protein BCCIP homolog n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A7S2T3X7_9CHLO)

HSP 1 Score: 98.2 bits (243), Expect = 2.120e-19
Identity = 81/271 (29.89%), Postives = 124/271 (45.76%), Query Frame = 0
Query:  109 ESDVELSVEFFDPREDDVSALSMLLGKYSKACTSVGKGKEQVTSSRALAKVVCAQTRVGTTIRLSDEDAPIGFISCINIREH--AKMLKD----LKRKLIQVAEKENNGRFITLLNKCMEGSGRFDSERMGLVLCERVMNMPTLVVGKMFEALCCEIEWATEDEKTQEQRASFKFGWYLYIAEVYCYEAERXXXXXXXXXXXXXXXXXXXXXXXXXIAFARVEDSEWHKHASCSVSWDWGGAED--GVKQRRMAMIVAAKKMATIREAVEQ 371
            E +V+ S EFFDP E D   +  LL  Y            +V     L   V  Q  VG+ +RL ++  PI  +S IN+++H   + L D    L++K     EKE       L     E  G+   E++GLV+ ERV+N P  +   + +A+  EIEWATEDE TQE+R  FK   +L ++ VY  E ++                         I + R ED  +HK    S ++    AE+  G+ Q RM M +  + +   R+ +++
Sbjct:   72 EGEVQTSFEFFDPTEGDFLGMKGLLNGYLDG---------EVYDCSGLVDHVIKQKTVGSVVRLEEQLDPIAVVSVINLQKHQDTQFLGDIVTFLRKKAPTDKEKE------MLAKDVFERKGK---EKIGLVVSERVVNCPMELSSPLNQAIFDEIEWATEDEPTQERRDEFKMDNFLLLSRVYFSEEDKVAKGKGKKKGKRQKTEAAAGD----IVYVRPEDEYFHKECDWSFTFPANRAENTPGLVQHRMVMWIKKEGVKRARKELDK 320          
BLAST of Gcaud2354.t1 vs. uniprot
Match: A0A5B8N0R4_9CHLO (Protein BCCIP homolog n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8N0R4_9CHLO)

HSP 1 Score: 96.3 bits (238), Expect = 7.360e-19
Identity = 80/269 (29.74%), Postives = 123/269 (45.72%), Query Frame = 0
Query:  111 DVELSVEFFDPREDDVSALSMLLGKYSKACTSVGKGKEQVTSSRALAKVVCAQTRVGTTIRLSDEDAPIGFISCINIREH--AKMLKD----LKRKLIQVAEKENNGRFITLLNKCMEGSGRFDSERMGLVLCERVMNMPTLVVGKMFEALCCEIEWATEDEKTQEQRASFKFGWYLYIAEVYCYEAERXXXXXXXXXXXXXXXXXXXXXXXXXIAFARVEDSEWHKHASCSVSWDWGGAED--GVKQRRMAMIVAAKKMATIREAVEQ 371
            +V+ S EFFDP E D   +  LL  Y            +V     L   V  Q  VG+ +RL ++  PI  +S IN+++H   + L D    L++K     EKE       L     E  G+   E++GLV+ ERV+N P  +   + +A+  EIEWATEDE TQE+R  FK   +L ++ VY  E ++                         I + R ED  +HK    S ++    AE+  G+ Q RM M +  + +   R+ +++
Sbjct:   52 EVQTSFEFFDPTEGDFLGMKGLLNGYLDG---------EVYDCSGLVDHVIKQKTVGSVVRLEEQLDPIAVVSVINLQKHQDTQFLGDIVTFLRKKAPTDKEKE------MLAKDVFERKGK---EKIGLVVSERVVNCPMELSSPLNQAIFDEIEWATEDEPTQERRDEFKMDNFLLLSRVYFSEEDKVAKGKGKKKGKRQKTEAAAGD----IVYVRPEDEYFHKECDWSFTFPANRAENTPGLVQHRMVMWIKKEGVKRARKELDK 298          
BLAST of Gcaud2354.t1 vs. uniprot
Match: A0A6J0N347_RAPSA (Protein BCCIP homolog n=3 Tax=Brassiceae TaxID=981071 RepID=A0A6J0N347_RAPSA)

HSP 1 Score: 94.4 bits (233), Expect = 4.420e-18
Identity = 60/184 (32.61%), Postives = 104/184 (56.52%), Query Frame = 0
Query:  109 ESDVELSVEFFDPREDDVSALSMLLGKYSKACTSVGKGKEQVTSSRALAKVVCAQTRVGTTIRLSDEDAPIGF--ISCINI---REHAKMLKDLKRKLIQVAEKENNGRFITLLNKCMEGSGRFDSERMGLVLCERVMNMPTLVVGKMFEALCCEIEWATEDEKTQEQRASFKFGWYLYIAEVY 287
            + DV+   EFFDP+  D + + +LL  Y          KE   SS     +V  QT VGT ++++D++    F  +S +N+   +EH K  +++K  L+QV  +++    + LL   +E      +  +G+++ +RVMN+P  ++  +++ L  E+EWATEDE T+E R SF+F WYL + ++Y
Sbjct:   74 QGDVQADFEFFDPKTTDFNGVKILLKNYLD-------DKEWDLSS--FVDLVLEQTTVGTVVKVADDEDESVFAVVSALNLGRYKEH-KCFREVKEFLLQVCSEKSAASDLKLL---LEKK----AHDVGILVSQRVMNLPPQLLPPLYDGLFDEVEWATEDEPTEELRGSFRFKWYLLVTKIY 240          
BLAST of Gcaud2354.t1 vs. uniprot
Match: A0A078GFN2_BRANA (Thioglucosidase n=7 Tax=Brassica TaxID=3705 RepID=A0A078GFN2_BRANA)

HSP 1 Score: 95.1 bits (235), Expect = 1.720e-17
Identity = 59/184 (32.07%), Postives = 103/184 (55.98%), Query Frame = 0
Query:  109 ESDVELSVEFFDPREDDVSALSMLLGKYSKACTSVGKGKEQVTSSRALAKVVCAQTRVGTTIRLSDEDAPIGF--ISCINI---REHAKMLKDLKRKLIQVAEKENNGRFITLLNKCMEGSGRFDSERMGLVLCERVMNMPTLVVGKMFEALCCEIEWATEDEKTQEQRASFKFGWYLYIAEVY 287
            + DV+   EFFDP+  D + + +LL  Y          KE   SS     +V  QT VGT ++++D++    F  +S +N+   +EH K  ++LK  L+QV  +++       + K +E      ++ +G+++ +RVMN+P  ++  +++ L  E+ WATEDE T+E R SF+F WYL + ++Y
Sbjct:  569 QGDVQADFEFFDPKPTDFNGVKILLKNYLD-------DKEWDLSS--FVDLVLEQTTVGTVVKVADDEDESVFAVVSALNLARYKEH-KCFRELKEFLLQVCSEKS-------VAKDLEAMLEKKAQGVGVLVSQRVMNLPPQLLPPLYDGLFDEVSWATEDEPTEELRGSFRFKWYLLVTKIY 735          
BLAST of Gcaud2354.t1 vs. uniprot
Match: A0A816JKB5_BRANA (Thioglucosidase n=4 Tax=Brassica TaxID=3705 RepID=A0A816JKB5_BRANA)

HSP 1 Score: 95.1 bits (235), Expect = 2.150e-17
Identity = 59/184 (32.07%), Postives = 103/184 (55.98%), Query Frame = 0
Query:  109 ESDVELSVEFFDPREDDVSALSMLLGKYSKACTSVGKGKEQVTSSRALAKVVCAQTRVGTTIRLSDEDAPIGF--ISCINI---REHAKMLKDLKRKLIQVAEKENNGRFITLLNKCMEGSGRFDSERMGLVLCERVMNMPTLVVGKMFEALCCEIEWATEDEKTQEQRASFKFGWYLYIAEVY 287
            + DV+   EFFDP+  D + + +LL  Y          KE   SS     +V  QT VGT ++++D++    F  +S +N+   +EH K  ++LK  L+QV  +++       + K +E      ++ +G+++ +RVMN+P  ++  +++ L  E+ WATEDE T+E R SF+F WYL + ++Y
Sbjct: 1033 QGDVQADFEFFDPKPTDFNGVKILLKNYLD-------DKEWDLSS--FVDLVLEQTTVGTVVKVADDEDESVFAVVSALNLARYKEH-KCFRELKEFLLQVCSEKS-------VAKDLEAMLEKKAQGVGVLVSQRVMNLPPQLLPPLYDGLFDEVSWATEDEPTEELRGSFRFKWYLLVTKIY 1199          
BLAST of Gcaud2354.t1 vs. uniprot
Match: A0A2R6XPU5_MARPO (Protein BCCIP homolog n=5 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XPU5_MARPO)

HSP 1 Score: 89.4 bits (220), Expect = 2.400e-16
Identity = 66/269 (24.54%), Postives = 124/269 (46.10%), Query Frame = 0
Query:  108 DESDVELSVEFFDPREDDVSALSMLLGKYSKACTSVGKGKEQVTSSRALAKVVCAQTRVGTTIRLSDEDAPIGFISCINIREHAKMLKDLKRKLIQVAEKENNGRFITLLNKCMEGSGRFDSERMGLVLCERVMNMPTLVVGKMFEALCCEIEWATEDEKTQEQRASFKFGWYLYIAEVYCYEAERXXXXXXXXXXXXXXXXXXXXXXXXXIAFARVEDSEWHKHASCSVSWDWGGAE------DGVKQRRMAMIVAAKKMATIREAVE 370
            +E  V +  EFFDP+  D   +  LL  Y +         + +        +  AQT VGT ++ S++D PIG ++ +N+  +    +   +++ Q   K +NG+      + +E      ++ +GL++ ER++N+P  +V  ++ +L  E+ WATEDE T+E +  FKF  Y+ +  V+   +++                         + + + ED  +H+  + S ++              VKQ R+ M   AK+MA  R+AV+
Sbjct:   53 EEGIVNVDFEFFDPKPTDFHGVKALLKSYLE---------DTLWDISGFVDIFLAQTTVGTVVKTSNDDNPIGILTALNLARYKD--RACMKEIYQYLWKNSNGK---AERENLETMWNKQAKDVGLIVSERLVNIPIDLVPPLYNSLLDEVMWATEDEPTKELQNFFKFKDYVIVTRVFVEHSKKKGSDDGKQAKKQKGVTEDKGE----LIYVKPEDEIFHQLCTWSFTFPVNAESLAAHETKNVKQLRLVMGFQAKRMAAFRDAVK 303          
BLAST of Gcaud2354.t1 vs. uniprot
Match: A0A1Q3B6N9_CEPFO (Protein BCCIP homolog n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3B6N9_CEPFO)

HSP 1 Score: 89.0 bits (219), Expect = 3.400e-16
Identity = 71/278 (25.54%), Postives = 130/278 (46.76%), Query Frame = 0
Query:  109 ESDVELSVEFFDPREDDVSALSMLLGKYSKACTSVGKGKEQVTSSRALAKVVCAQTRVGTTIRLSDEDAP--IGFISCINI---REHAKMLKDLKRKLIQVA-EKENNGRFITLLNKCMEGSGRFDSERMGLVLCERVMNMPTLVVGKMFEALCCEIEWATEDEKTQEQRASFKFGWYLYIAEVYCYEAERXXXXXXXXXXXXXXXXXXXXXXXXXIAFARVEDSEWHKHASCSVSWDWGGAEDGVKQRR------MAMIVAAKKMATIREAVEQRVN 374
            E  V+    FFDP+ DD   + ML+  Y          K+   S      ++ AQT VGT +++  E+       IS +N+   ++H K + +LK  L++V  EK+    F +LL +         +  +GL++ +RVMN+P+ ++  +++AL  E+ WATEDE T+E++ SF F  Y+ I+++Y                               I + + ED  +H+ +SCS S+     +    + +      + M+V A K+++ +  +   +N
Sbjct:   73 EGVVQADFAFFDPKSDDFHGVKMLMQSYLD-------NKQWDLSG--FVDLILAQTSVGTVVKIEGEEDEGLFSVISALNLGRYKDH-KCIMELKEFLLKVCQEKDVINHFRSLLGE--------QAHNVGLLVSQRVMNLPSQLLPPLYDALFDEVSWATEDEPTEERKRSFSFKSYILISKIY-------------KPKNITQRRRLSSDNEEAIIYTKPEDEIFHQLSSCSFSFALHTQQTSTHELKDYRLMGLVMVVEADKISSFQSQLHSLIN 319          
BLAST of Gcaud2354.t1 vs. uniprot
Match: UPI001CC75F15 (protein BCCIP homolog isoform X1 n=2 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC75F15)

HSP 1 Score: 89.0 bits (219), Expect = 3.710e-16
Identity = 66/275 (24.00%), Postives = 131/275 (47.64%), Query Frame = 0
Query:  112 VELSVEFFDPREDDVSALSMLLGKYSKACTSVGKGKEQVTSSRALAKVVCAQTRVGTTIRLSD--EDAPIGFISCINIREHA--KMLKDLKRKLIQVAEKENNGRFITLLNKCMEGSGRFDSERMGLVLCERVMNMPTLVVGKMFEALCCEIEWATEDEKTQEQRASFKFGWYLYIAEVYCYEAERXXXXXXXXXXXXXXXXXXXXXXXXXIAFARVEDSEWHKHASCSVSWDWGGAEDGVKQRR------MAMIVAAKKMATIREAVEQRVNGS 376
            ++    FFDP+ +D   + +LL  Y            +    R    ++ AQT VGT ++L D  +D     ++ +N+ ++   +   +LK  L++V +++N      +L K     G  ++  +GL++ +RV+N+P  ++  +++AL  E+ WATEDE T+E R SF+F +YL +  +Y +++                           + + + ED  +HK +S S S+     +  + + R      + M+V A K+ T R+ ++  ++ S
Sbjct:   81 IKADFAFFDPKPNDFHGVKILLQTYLD---------NKQWDLRGFVDLILAQTTVGTVVKLEDAEDDGLFSVVTALNLGQYKDNRCFMELKEYLLEVCQEKN------VLGKLRLILGE-EASNVGLLVSQRVVNLPPQLLPPLYDALFDEVSWATEDEPTEELRDSFRFKFYLVLTRIYKHKSANQQKGTSRHCSDEP------------MIYIKPEDEIFHKLSSWSFSYPLRTQQLAMHELRNYSLTGLVMVVEADKIPTFRKELQSLISES 327          
The following BLAST results are available for this feature:
BLAST of Gcaud2354.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J058_9FLOR9.660e-10447.53Protein BCCIP-like n=1 Tax=Gracilariopsis chorda T... [more]
U5D053_AMBTC3.340e-2235.20Protein BCCIP homolog n=4 Tax=Amborella trichopoda... [more]
A0A7S2T3X7_9CHLO2.120e-1929.89Protein BCCIP homolog n=2 Tax=Chloropicon primus T... [more]
A0A5B8N0R4_9CHLO7.360e-1929.74Protein BCCIP homolog n=1 Tax=Chloropicon primus T... [more]
A0A6J0N347_RAPSA4.420e-1832.61Protein BCCIP homolog n=3 Tax=Brassiceae TaxID=981... [more]
A0A078GFN2_BRANA1.720e-1732.07Thioglucosidase n=7 Tax=Brassica TaxID=3705 RepID=... [more]
A0A816JKB5_BRANA2.150e-1732.07Thioglucosidase n=4 Tax=Brassica TaxID=3705 RepID=... [more]
A0A2R6XPU5_MARPO2.400e-1624.54Protein BCCIP homolog n=5 Tax=Marchantia polymorph... [more]
A0A1Q3B6N9_CEPFO3.400e-1625.54Protein BCCIP homolog n=1 Tax=Cephalotus follicula... [more]
UPI001CC75F153.710e-1624.00protein BCCIP homolog isoform X1 n=2 Tax=Telopea s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 187..207
NoneNo IPR availableCOILSCoilCoilcoord: 305..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51
NoneNo IPR availablePANTHERPTHR13261:SF0BRCA2 AND CDKN1A-INTERACTING PROTEINcoord: 29..373
IPR025602BCP1 familyPFAMPF13862BCCIPcoord: 112..327
e-value: 6.4E-37
score: 127.3
IPR025602BCP1 familyPANTHERPTHR13261BRCA2 AND CDKN1A INTERACTING PROTEINcoord: 29..373

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_48_length_65905_cov_4.503282contigNODE_48_length_65905_cov_4.503282:47119..48270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2354.t1Gcaud2354.t1Gracilaria caudata M_176_S67 malemRNANODE_48_length_65905_cov_4.503282 47119..48270 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2354.t1 ID=Gcaud2354.t1|Name=Gcaud2354.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=384bp
MGKRKRNGEKRRANSSTENGAAASENRARAEETKDVDANCVHYASSSEED
SGKELLRETAKLFSVFDKDVCRSLGSDSDLDFDKDQDEEDDKDKEYMKDI
LLTRSKADESDVELSVEFFDPREDDVSALSMLLGKYSKACTSVGKGKEQV
TSSRALAKVVCAQTRVGTTIRLSDEDAPIGFISCINIREHAKMLKDLKRK
LIQVAEKENNGRFITLLNKCMEGSGRFDSERMGLVLCERVMNMPTLVVGK
MFEALCCEIEWATEDEKTQEQRASFKFGWYLYIAEVYCYEAEREKDEGVK
EDKKKKRARVEKKESEQQIAFARVEDSEWHKHASCSVSWDWGGAEDGVKQ
RRMAMIVAAKKMATIREAVEQRVNGSSSGEADE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025602BCP1_family