Gcaud2350.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2350.t1
Unique NameGcaud2350.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length95
Homology
BLAST of Gcaud2350.t1 vs. uniprot
Match: A0A2V3J0D9_9FLOR (Sec-independent protein translocase protein TatA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0D9_9FLOR)

HSP 1 Score: 127 bits (320), Expect = 1.420e-36
Identity = 70/94 (74.47%), Postives = 82/94 (87.23%), Query Frame = 0
Query:    1 MGLFGLGLPELAVIAGVGIFIFGPNKIAELGKDLGGLAGGLKKASTEFRDAMQESLDEADRELEQKRVEKASVSGASDSPSATAVESKQEKAEA 94
            MGLFGLGLPELAVIAGVGIFIFGP+KIAELGKDLGGLAGGLKKAS+EFR+AMQESLDEADRE+EQK  +K + +  + + S+ +  + QEKAEA
Sbjct:    1 MGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFREAMQESLDEADREIEQKHTDKTAQAPNTTNESSASTTNVQEKAEA 94          
BLAST of Gcaud2350.t1 vs. uniprot
Match: A0A7S0BK48_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BK48_9RHOD)

HSP 1 Score: 93.6 bits (231), Expect = 2.200e-22
Identity = 51/93 (54.84%), Postives = 69/93 (74.19%), Query Frame = 0
Query:    1 MGLFGLGLPELAVIAGVGIFIFGPNKIAELGKDLGGLAGGLKKASTEFRDAMQESLDEADRELEQKRVEKASVSGASD---SPSATAVESKQE 90
            MGLFGLG PEL VI GV   IFGPNKI+ELGK LG +AG +KKA++EF+DAMQESL++AD+E+  ++   +   G +    +P AT +E+K+E
Sbjct:   50 MGLFGLGFPELLVIGGVTALIFGPNKISELGKSLGSVAGSVKKATSEFQDAMQESLEQADKEIAAQKESDSGKEGETKKTPTPEATTIETKKE 142          
BLAST of Gcaud2350.t1 vs. uniprot
Match: A0A7S2ZGP5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZGP5_9RHOD)

HSP 1 Score: 91.7 bits (226), Expect = 1.190e-21
Identity = 44/67 (65.67%), Postives = 58/67 (86.57%), Query Frame = 0
Query:    1 MGLFGLGLPELAVIAGVGIFIFGPNKIAELGKDLGGLAGGLKKASTEFRDAMQESLDEADRELEQKR 67
            MGLFGLG PEL VI GV   IFGPNKI+ELGK+LG +AG +KKA++EF+DAMQESL++AD+E+ +++
Sbjct:   50 MGLFGLGFPELLVIGGVTALIFGPNKISELGKNLGSVAGSVKKATSEFQDAMQESLEQADKEIAEQK 116          
BLAST of Gcaud2350.t1 vs. uniprot
Match: A0A7S0ZBV1_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBV1_9RHOD)

HSP 1 Score: 89.7 bits (221), Expect = 6.450e-21
Identity = 43/67 (64.18%), Postives = 56/67 (83.58%), Query Frame = 0
Query:    1 MGLFGLGLPELAVIAGVGIFIFGPNKIAELGKDLGGLAGGLKKASTEFRDAMQESLDEADRELEQKR 67
            MG+FGLG  EL V+AGVG+ +FGP K+AE GK LG LAG +KKA++EF++AMQESLDEAD+E+  K+
Sbjct:   51 MGIFGLGWGELLVVAGVGVLLFGPKKLAESGKSLGSLAGSVKKATSEFQEAMQESLDEADKEIAAKK 117          
BLAST of Gcaud2350.t1 vs. uniprot
Match: A0A1X6P1X6_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P1X6_PORUM)

HSP 1 Score: 88.6 bits (218), Expect = 3.100e-20
Identity = 44/78 (56.41%), Postives = 57/78 (73.08%), Query Frame = 0
Query:    1 MGLFGLGLPELAVIAGVGIFIFGPNKIAELGKDLGGLAGGLKKASTEFRDAMQESLDEADRELEQKRVEKASVSGASD 78
            MG+FGLG PE+AV+ GVG+ +FGP K+A+ GK  G LAG +KKA+ EFRDAM ESL +AD E+E ++  K  V  A D
Sbjct:   50 MGIFGLGAPEIAVVVGVGLLLFGPKKLADYGKKAGSLAGDVKKATAEFRDAMDESLSDADAEIEARKATKPMVVEAKD 127          
BLAST of Gcaud2350.t1 vs. uniprot
Match: M1VCX5_CYAM1 (Similar to thylakoidal sec-independent protein transporter Tha4 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VCX5_CYAM1)

HSP 1 Score: 83.6 bits (205), Expect = 2.310e-18
Identity = 46/89 (51.69%), Postives = 68/89 (76.40%), Query Frame = 0
Query:    1 MGLFGLGLPELAVIAGVGIFIFGPNKIAELGKDLGGLAGGLKKASTEFRDAMQESLDEADRELEQKRVEKASVSGASDSPSATAVESKQ 89
            MGLFGLG PE+AVIAGVG+ I+GP++I ELG++LG LAG LK+AS+EF++ ++ SL +A++E +QK   K     ++D P+A   +SK+
Sbjct:   69 MGLFGLGWPEIAVIAGVGLLIWGPSRIGELGRNLGTLAGNLKRASSEFKEGLETSLADAEKEEKQKEEMKLKSLKSAD-PTAATTDSKR 156          
BLAST of Gcaud2350.t1 vs. uniprot
Match: A0A7J7IRQ4_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IRQ4_9RHOD)

HSP 1 Score: 82.0 bits (201), Expect = 9.210e-18
Identity = 38/66 (57.58%), Postives = 55/66 (83.33%), Query Frame = 0
Query:    1 MGLFGLGLPELAVIAGVGIFIFGPNKIAELGKDLGGLAGGLKKASTEFRDAMQESLDEADRELEQK 66
            MGLFGLG PE+AVI GVG+ I+GP+++ ELG++LG LAG LK+AS+EF++ ++ SL EA++E + K
Sbjct:   69 MGLFGLGWPEIAVIVGVGLLIWGPSRVGELGRNLGSLAGNLKRASSEFKEGLETSLAEAEKEQQSK 134          
BLAST of Gcaud2350.t1 vs. uniprot
Match: A0A5J4YZZ5_PORPP (Sec-independent protein translocase protein TatA n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZZ5_PORPP)

HSP 1 Score: 80.1 bits (196), Expect = 4.100e-17
Identity = 44/88 (50.00%), Postives = 63/88 (71.59%), Query Frame = 0
Query:    4 FGLGLPELAVIAGVGIFIFGPNKIAELGKDLGGLAGGLKKASTEFRDAMQESLDEADRELEQKRVEKASVSGASDSPSATAVESKQEK 91
            FGLG  E+AV+AGV + IFGP+K+A  GK LG +AG +KKA+ EF++AMQESL+ AD+E+  ++ ++ S   AS   + TA  S +EK
Sbjct:   57 FGLGAGEIAVVAGVALLIFGPSKLASSGKSLGSMAGSVKKATAEFQEAMQESLEXADKEIAARKAKEGSAE-ASKEGTTTAAASTEEK 143          
BLAST of Gcaud2350.t1 vs. uniprot
Match: A0A1X6NNZ5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NNZ5_PORUM)

HSP 1 Score: 76.6 bits (187), Expect = 7.290e-16
Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 0
Query:    1 MGLFGLGLPELAVIAGVGIFIFGPNKIAELGKDLGGLAGGLKKASTEFRDAMQES 55
            MG+FGLG PE+AV+ GVG+ +FGP K+A+ GK  G LAG +KKA+ EFRDAM ES
Sbjct:    1 MGIFGLGAPEIAVVVGVGLLLFGPKKLADYGKKAGSLAGDVKKATAEFRDAMDES 55          
BLAST of Gcaud2350.t1 vs. uniprot
Match: A0A5B8ML07_9CHLO (Twin arginine-targeting-like sec-independent protein translocator protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8ML07_9CHLO)

HSP 1 Score: 72.8 bits (177), Expect = 1.710e-14
Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 0
Query:    1 MGLFGLGLPELAVIAGVGIFIFGPNKIAELGKDLGGLAGGLKKASTEFRDAMQESL 56
            MGLFGLGLPE+AVIAGVGI +FGP+KI ELGK LG    GL+ A+ EF++ + E L
Sbjct:   51 MGLFGLGLPEIAVIAGVGILLFGPSKIPELGKTLGKTVRGLQDAAQEFKEELDEEL 106          
The following BLAST results are available for this feature:
BLAST of Gcaud2350.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0D9_9FLOR1.420e-3674.47Sec-independent protein translocase protein TatA n... [more]
A0A7S0BK48_9RHOD2.200e-2254.84Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZGP5_9RHOD1.190e-2165.67Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0ZBV1_9RHOD6.450e-2164.18Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1X6P1X6_PORUM3.100e-2056.41Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M1VCX5_CYAM12.310e-1851.69Similar to thylakoidal sec-independent protein tra... [more]
A0A7J7IRQ4_9RHOD9.210e-1857.58Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A5J4YZZ5_PORPP4.100e-1750.00Sec-independent protein translocase protein TatA n... [more]
A0A1X6NNZ5_PORUM7.290e-1663.64Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5B8ML07_9CHLO1.710e-1464.29Twin arginine-targeting-like sec-independent prote... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 49..69
NoneNo IPR availableCOILSCoilCoilcoord: 84..94
NoneNo IPR availableGENE3D1.20.5.3310coord: 5..65
e-value: 1.5E-11
score: 45.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..71
NoneNo IPR availablePANTHERPTHR33162SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTICcoord: 2..91
NoneNo IPR availablePANTHERPTHR33162:SF1SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTICcoord: 2..91
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 24..94
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..23
IPR003369Sec-independent protein translocase protein TatA/B/EPFAMPF02416TatA_B_Ecoord: 6..51
e-value: 4.4E-8
score: 32.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_48_length_65905_cov_4.503282contigNODE_48_length_65905_cov_4.503282:39420..39704 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2350.t1Gcaud2350.t1Gracilaria caudata M_176_S67 malemRNANODE_48_length_65905_cov_4.503282 39420..39704 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2350.t1 ID=Gcaud2350.t1|Name=Gcaud2350.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=95bp
MGLFGLGLPELAVIAGVGIFIFGPNKIAELGKDLGGLAGGLKKASTEFRD
AMQESLDEADRELEQKRVEKASVSGASDSPSATAVESKQEKAEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003369TatA/B/E