Gcaud2338.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2338.t1
Unique NameGcaud2338.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length225
Homology
BLAST of Gcaud2338.t1 vs. uniprot
Match: A0A2V3J038_9FLOR (Thiamine phosphate synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J038_9FLOR)

HSP 1 Score: 255 bits (651), Expect = 3.120e-83
Identity = 136/199 (68.34%), Postives = 164/199 (82.41%), Query Frame = 0
Query:   24 MSVQHIVAQVVAAPTNPHRVTFVQLRDKNVSRADSIQLGKQLRDITACANVAFVVNDDIQLAALLQADGVHLGQDDQPVSAARQVLGDDAIVGVSAATEQEIDAAIADGADYIGVGSVFATSSKPDAGEPLGEHELRRLVRYTNSRIPLVAIGGINVHNAGLCKRAGADGIAVISAIMASPRPTLAAQQLAAVMASSDI 222
            M+V+ IVAQV ++ ++P+RVTFVQLRDK +SR  S+ LGK LR ITA ANVAFVVNDDIQLAALLQADGVHLGQ+D+ VS AR VLG+DAIVGVSA  EQ+ID AIA GADY+GVG VFATSSK DAG+ +GE+ LR+LV YT SRIP+VAIGGI+  NA LCKRAGADG+AVISAIM +  P  AA  L+++M + ++
Sbjct:    1 MTVEQIVAQVTSSSSHPNRVTFVQLRDKRLSREQSLHLGKVLRHITAQANVAFVVNDDIQLAALLQADGVHLGQEDESVSVARHVLGNDAIVGVSADCEQQIDVAIAHGADYVGVGPVFATSSKADAGDAIGEYRLRQLVEYTRSRIPVVAIGGIDATNASLCKRAGADGVAVISAIMRNENPQHAAYHLSSIMNAPNV 199          
BLAST of Gcaud2338.t1 vs. uniprot
Match: A0A3M1L5F4_9CHLR (Thiamine-phosphate synthase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1L5F4_9CHLR)

HSP 1 Score: 167 bits (422), Expect = 2.200e-48
Identity = 96/205 (46.83%), Postives = 129/205 (62.93%), Query Frame = 0
Query:    9 DPSVYLVTDRRTAPGMSVQHIVAQVVAAPTNPHRVTFVQLRDKNVSRADSIQLGKQLRDITACANVAFVVNDDIQLAALLQADGVHLGQDDQPVSAARQVLGDDAIVGVSAATEQEIDAAIADGADYIGVGSVFATSSKPDAGEPLGEHELRRLVRYTNSRIPLVAIGGINVHNAGLCKRAGADGIAVISAIMASPRPTLAAQQL 213
            D SVY++TDRR A   S+  +V   +         T VQLR+K  +    I+LG+ L  IT  A V  +VND + +A  + A+GVH+GQDD P + AR+++G D I+GVSA T +E   A  DGADY+GVG V+ T SKPDAGEP+G   L  + R  +  IP+VAIGGI   NA    RAGA G+AVISA++ +P P  AA++L
Sbjct:    6 DWSVYVITDRRVAGDRSILEVVRAALRGGA-----TVVQLREKAATTRQMIELGRALHRITQEAGVPLIVNDRVDVALAVGAEGVHVGQDDMPAALARRLIGPDRILGVSAGTVEEAVQAERDGADYLGVGDVYGTPSKPDAGEPIGVEGLAEIARAVS--IPVVAIGGIRPDNAAAVIRAGASGVAVISAVVGAPDPEAAARRL 203          
BLAST of Gcaud2338.t1 vs. uniprot
Match: A0A7V3PPV7_9BACT (Thiamine-phosphate synthase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V3PPV7_9BACT)

HSP 1 Score: 167 bits (422), Expect = 2.270e-48
Identity = 98/212 (46.23%), Postives = 134/212 (63.21%), Query Frame = 0
Query:    9 DPSVYLVTDRRTAPGMSVQHIVAQVVAAPTNPHRVTFVQLRDKNVSRADSIQLGKQLRDITACANVAFVVNDDIQLAALLQADGVHLGQDDQPVSAARQVLGDDAIVGVSAATEQEIDAAIADGADYIGVGSVFATSSKPDAGEPLGEHELRRLVRYTNSRIPLVAIGGINVHNAGLCKRAGADGIAVISAIMASPRPTLAAQQLAAVMASS 220
            D SVYLVTDR    G  +  +VA  VA       VT VQLR+K  S  + +++ K+L ++     V  ++ND + +A    ADG H+GQDD P +AAR++LG D I+GV+ AT +E   A  +GADY+G  +VFAT +K DAG+P+G   LRRL     S +P+VAIGG+N+ NAG   RAGA G+AV+ AIMA+  P  AAQ L  V+ S+
Sbjct:    4 DVSVYLVTDRGLLAGRRLTDVVAAAVAGG-----VTCVQLREKEASGREFVRIAKELLEVLRPVGVPLIINDRVDVAVAADADGAHVGQDDIPAAAARKMLGPDKILGVTVATPEEAAKAAEEGADYVGASAVFATPTKRDAGQPMGIDGLRRLCMA--SPVPVVAIGGVNLENAGDMIRAGAAGVAVVRAIMAASDPKAAAQLLRQVVESA 208          
BLAST of Gcaud2338.t1 vs. uniprot
Match: I0BPT0_9BACL (Thiamine-phosphate synthase n=3 Tax=Paenibacillus mucilaginosus TaxID=61624 RepID=I0BPT0_9BACL)

HSP 1 Score: 165 bits (417), Expect = 1.250e-47
Identity = 100/204 (49.02%), Postives = 127/204 (62.25%), Query Frame = 0
Query:   11 SVYLVTDRRTAPGMSVQHIVAQVVAAPTNPHRVTFVQLRDKNVSRADSIQLGKQLRDITACANVAFVVNDDIQLAALLQADGVHLGQDDQPVSAARQVLGDDAIVGVSAATEQEIDAAIADGADYIGVGSVFATSSKPDAGEPLGEHELRRLVRYTNSRIPLVAIGGINVHNAGLCKRAGADGIAVISAIMASPRPTLAAQQLA 214
            SVYLVTD       S   IV   VA       VT VQLRDK     D +  G+++R++   A + FVVND   LA LL+ADGVH+GQDD P   AR++LG DAI+GVSA T +E + A+A GADY+GVG V+AT+SK DAGE +G   + R +R    ++PLV IGGI+  NA     +GA G+AVISAI     P  AA+ LA
Sbjct:   11 SVYLVTDTAGYEHRSAAEIVRAAVAGG-----VTLVQLRDKQAQLRDVLPAGREIRELCRSAGIPFVVNDRADLALLLEADGVHVGQDDLPAQEARRLLGPDAIIGVSAGTMEEAEWAVAQGADYLGVGPVYATASKKDAGEAIGTDLIAR-IRSRWPQLPLVGIGGIHQGNAAPVLASGAQGVAVISAITRQSDPQSAARGLA 208          
BLAST of Gcaud2338.t1 vs. uniprot
Match: A0A351JWK3_9BACT (Thiamine-phosphate synthase n=1 Tax=Candidatus Acetothermia bacterium TaxID=2053493 RepID=A0A351JWK3_9BACT)

HSP 1 Score: 163 bits (413), Expect = 5.010e-47
Identity = 98/220 (44.55%), Postives = 131/220 (59.55%), Query Frame = 0
Query:    3 VSRHSFDPSVYLVTDRRTAPGMSVQHIVAQVVAAPTNPHRVTFVQLRDKNVSRADSIQLGKQLRDITACANVAFVVNDDIQLAALLQADGVHLGQDDQPVSAARQVLGDDAIVGVSAATEQEIDAAIADGADYIGVGSVFATSSKPDAGEPLGEHELRRLVRYTNSRIPLVAIGGINVHNAGLCKRAGADGIAVISAIMASPRPTLAAQQLAAVMASSDI 222
            + R + D SVY+VTDRRTA    +  +V   V+        T VQLR+K  S  D + LG+ L  IT  A V  +VND I +A  L A+GVH+GQDD P   AR+++G D I+GVS  T +    A   GADY+GVG +F T SKPDAG P+G   L  + R   S IP+V IGGI + NA     AGA G+AVISA++ +P P  AAQ++  ++ S  +
Sbjct:    1 MKRRAVDYSVYVVTDRRTAGDRDLVAVVEAAVSGGA-----TVVQLREKASSTRDWLALGRALHRITRRAGVPLIVNDRIDVALALDAEGVHVGQDDMPAGIARRLIGPDKILGVSTETLELAREAAEAGADYLGVGDIFGTPSKPDAGPPIGLARLAEIAR--KSEIPVVGIGGITLENAASVIAAGAVGVAVISAVIGAPDPAAAAQRMRGIVNSGRL 213          
BLAST of Gcaud2338.t1 vs. uniprot
Match: A0A7C5YKV5_9BACT (Thiamine-phosphate synthase n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C5YKV5_9BACT)

HSP 1 Score: 162 bits (411), Expect = 1.100e-46
Identity = 91/202 (45.05%), Postives = 122/202 (60.40%), Query Frame = 0
Query:   12 VYLVTDRRTAPGMSVQHIVAQVVAAPTNPHRVTFVQLRDKNVSRADSIQLGKQLRDITACANVAFVVNDDIQLAALLQADGVHLGQDDQPVSAARQVLGDDAIVGVSAATEQEIDAAIADGADYIGVGSVFATSSKPDAGEPLGEHELRRLVRYTNSRIPLVAIGGINVHNAGLCKRAGADGIAVISAIMASPRPTLAAQQL 213
            VY+VTDR   P  S   I    VA   +      +QLRDK  +    ++  K +RD+T   +  F+VND + +A    ADG+H+G DD PV  AR++LG+  I+G S A E E   AIA+GADY+ +GS+FATS+KPDAGEP+G   +R + +      PLVAIGGIN+ NA     AGAD +AVISA+  S  P  A +QL
Sbjct:    8 VYVVTDRFINPNRSHVDIAKAAVAGGAS-----LIQLRDKEATTRQLLEWAKVIRDLTRKTDTLFIVNDRVDIALASDADGIHVGDDDMPVPVARRLLGEGKIIGRSVANEDEALKAIAEGADYVSIGSIFATSTKPDAGEPIGVEAIRLVRKVLPHDYPLVAIGGINLQNAASVFEAGADAVAVISAVACSDDPVDAVRQL 204          
BLAST of Gcaud2338.t1 vs. uniprot
Match: UPI00128AE613 (thiamine phosphate synthase n=1 Tax=Kallotenue sp. CFH 73958 TaxID=2592335 RepID=UPI00128AE613)

HSP 1 Score: 161 bits (407), Expect = 4.650e-46
Identity = 93/211 (44.08%), Postives = 131/211 (62.09%), Query Frame = 0
Query:    3 VSRHSFDPSVYLVTDRRTAPGMSVQHIVAQVVAAPTNPHRVTFVQLRDKNVSRADSIQLGKQLRDITACANVAFVVNDDIQLAALLQADGVHLGQDDQPVSAARQVLGDDAIVGVSAATEQEIDAAIADGADYIGVGSVFATSSKPDAGEPLGEHELRRLVRYTNSRIPLVAIGGINVHNAGLCKRAGADGIAVISAIMASPRPTLAAQQL 213
            ++R + + S+ ++TDR TA   S+  IV   +         T +QLR+K+ +  + I LG+ L  IT  ANV  +VND + +A  L ADGVH+GQDD P   ARQ++G   ++GVSA T ++  AA   GADY+GVG +F T SKPDAG P+G   LR + + T  R+P++ IGGI+V NA      GA GIAVISA++ +P P  AA +L
Sbjct:    1 MARPAINWSLCVITDRATAGQRSIPDIVRAAIHGGA-----TMIQLREKHATTREMIALGEALLTITRAANVPLIVNDRLDVALALDADGVHVGQDDLPAPLARQLIGPARLLGVSAETVEQARAAERAGADYLGVGDLFGTPSKPDAGPPIGLEGLRAIAKTT--RLPILGIGGISVANAATVIETGAHGIAVISAVVGAPDPAAAAHEL 204          
BLAST of Gcaud2338.t1 vs. uniprot
Match: A0A3D0CR78_9CHLR (Thiamine-phosphate synthase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3D0CR78_9CHLR)

HSP 1 Score: 161 bits (408), Expect = 5.080e-46
Identity = 93/207 (44.93%), Postives = 126/207 (60.87%), Query Frame = 0
Query:    9 DPSVYLVTDRRTAPGMSVQHIVAQVVAAPTNPHRVTFVQLRDKNVSRADSIQLGKQLRDITACANVAFVVNDDIQLAALLQADGVHLGQDDQPVSAARQVLGDDAIVGVSAATEQEIDAAIADGADYIGVGSVFATSSKPDAGEPLGEHELRRLVRYTNSRIPLVAIGGINVHNAGLCKRAGADGIAVISAIMASPRPTLAAQQLAA 215
            D SVY++TDRR A G S+  +V   +A        T VQLR+K     + I+LG  L ++T  A +  ++ND + +AA L A+GVH+GQDD P   AR+++G D I+GVS +T  E   A   GADY+GVG +F T SKPDAG P+G   L R+VR  +  IP+VAIGGI   NA    +AGA G+AVISA+  +     A + L A
Sbjct:    5 DWSVYIITDRRAAGGRSLVELVGAAIAGGA-----TAVQLREKGTVTREIIRLGHALHEVTRAAGIPLIINDRVDVAAALDAEGVHVGQDDIPAPVARRLIGPDRILGVSVSTADEARRAELQGADYLGVGDIFGTPSKPDAGSPIGVGSLVRIVRAVS--IPVVAIGGITPENAAAVIQAGAVGVAVISAVFGAEDVAQATRDLRA 204          
BLAST of Gcaud2338.t1 vs. uniprot
Match: A0A2U3KKB0_9DELT (Thiamine-phosphate synthase n=1 Tax=Syntrophobacter sp. SbD1 TaxID=2043167 RepID=A0A2U3KKB0_9DELT)

HSP 1 Score: 160 bits (405), Expect = 9.860e-46
Identity = 96/213 (45.07%), Postives = 131/213 (61.50%), Query Frame = 0
Query:    1 MRVSRHSFDPSVYLVTDRRTAPGMSVQHIVAQVVAAPTNPHRVTFVQLRDKNVSRADSIQLGKQLRDITACANVAFVVNDDIQLAALLQADGVHLGQDDQPVSAARQVLGDDAIVGVSAATEQEIDAAIADGADYIGVGSVFATSSKPDAGEPLGEHELRRLVRYTNSRIPLVAIGGINVHNAGLCKRAGADGIAVISAIMASPRPTLAAQQL 213
            M+  +   D  +YLVTDR  A G +++ +V + VA       VT VQLR+K+    + +     LR  T    + F++ND + +A   +A+GVHLGQ+D   + AR+++G D I+GVS +T  E   A ADGADY+GVG +FATS+K DA  P G   L+ + R    RIPLV IGGIN  NAG   RAG DG AV+SAI+ASP P +AA+ L
Sbjct:    1 MKACKSGIDFGLYLVTDRFLAGGRTLEQVVRESVAGG-----VTVVQLREKDAGAREFLDQAFVLRQATLELGIPFIINDRVDIALACRAEGVHLGQEDMHCALARRIVGKDMIIGVSVSTTHEALEAEADGADYLGVGPLFATSTKSDALPPTGLGVLQSIRRAV--RIPLVGIGGINYTNAGDVIRAGGDGAAVVSAIIASPNPEMAARAL 206          
BLAST of Gcaud2338.t1 vs. uniprot
Match: UPI00195608FB (thiamine phosphate synthase n=1 Tax=Brevibacillus fulvus TaxID=1125967 RepID=UPI00195608FB)

HSP 1 Score: 160 bits (404), Expect = 1.760e-45
Identity = 87/175 (49.71%), Postives = 122/175 (69.71%), Query Frame = 0
Query:   43 VTFVQLRDKN--VSRADSIQLGKQLRDITACANVAFVVNDDIQLAALLQADGVHLGQDDQPVSAARQVLGDDAIVGVSAATEQEIDAAIADGADYIGVGSVFATSSKPDAGEPLGEHELRRLVRYTNSRIPLVAIGGINVHNAGLCKRAGADGIAVISAIMASPRPTLAAQQLAA 215
            V  VQ RDK   +S ++ IQL +Q++ +    N  F VNDD+QLA  L+ADG+H+GQDD P+S  ++++GD+ ++GVSA T  E  AA   GADY+GVG+++AT+SKPDAGEP+G + L  + R    R+P+V IGGI++ NA    +AGADGIAVISAI  +  P  AA+ L+A
Sbjct:   41 VGLVQFRDKGSRLSESERIQLARQMQALCREHNALFFVNDDVQLAVDLKADGIHVGQDDMPLSEVKKLVGDNCLIGVSAGTVSEAVAAQQGGADYLGVGAMYATASKPDAGEPIGPNGLADIRRAVGERLPIVGIGGIHLGNAASVLQAGADGIAVISAITRAESPRQAARTLSA 215          
The following BLAST results are available for this feature:
BLAST of Gcaud2338.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J038_9FLOR3.120e-8368.34Thiamine phosphate synthase n=1 Tax=Gracilariopsis... [more]
A0A3M1L5F4_9CHLR2.200e-4846.83Thiamine-phosphate synthase n=1 Tax=Chloroflexi ba... [more]
A0A7V3PPV7_9BACT2.270e-4846.23Thiamine-phosphate synthase n=1 Tax=Armatimonadete... [more]
I0BPT0_9BACL1.250e-4749.02Thiamine-phosphate synthase n=3 Tax=Paenibacillus ... [more]
A0A351JWK3_9BACT5.010e-4744.55Thiamine-phosphate synthase n=1 Tax=Candidatus Ace... [more]
A0A7C5YKV5_9BACT1.100e-4645.05Thiamine-phosphate synthase n=1 Tax=bacterium TaxI... [more]
UPI00128AE6134.650e-4644.08thiamine phosphate synthase n=1 Tax=Kallotenue sp.... [more]
A0A3D0CR78_9CHLR5.080e-4644.93Thiamine-phosphate synthase n=1 Tax=Chloroflexi ba... [more]
A0A2U3KKB0_9DELT9.860e-4645.07Thiamine-phosphate synthase n=1 Tax=Syntrophobacte... [more]
UPI00195608FB1.760e-4549.71thiamine phosphate synthase n=1 Tax=Brevibacillus ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034291Thiamine phosphate synthaseTIGRFAMTIGR00693TIGR00693coord: 11..213
e-value: 2.7E-57
score: 191.2
IPR034291Thiamine phosphate synthaseHAMAPMF_00097TMP_synthasecoord: 9..218
score: 25.795002
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 2..220
e-value: 1.6E-65
score: 222.0
IPR022998Thiamine phosphate synthase/TenIPFAMPF02581TMP-TENIcoord: 12..200
e-value: 1.3E-55
score: 187.5
IPR022998Thiamine phosphate synthase/TenICDDcd00564TMP_TenIcoord: 12..215
e-value: 3.75077E-76
score: 226.246
NoneNo IPR availablePANTHERPTHR20857THIAMINE-PHOSPHATE PYROPHOSPHORYLASEcoord: 3..219
IPR036206Thiamin phosphate synthase superfamilySUPERFAMILY51391Thiamin phosphate synthasecoord: 5..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_48_length_65905_cov_4.503282contigNODE_48_length_65905_cov_4.503282:9888..10624 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2338.t1Gcaud2338.t1Gracilaria caudata M_176_S67 malemRNANODE_48_length_65905_cov_4.503282 9888..10624 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2338.t1 ID=Gcaud2338.t1|Name=Gcaud2338.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=225bp
MRVSRHSFDPSVYLVTDRRTAPGMSVQHIVAQVVAAPTNPHRVTFVQLRD
KNVSRADSIQLGKQLRDITACANVAFVVNDDIQLAALLQADGVHLGQDDQ
PVSAARQVLGDDAIVGVSAATEQEIDAAIADGADYIGVGSVFATSSKPDA
GEPLGEHELRRLVRYTNSRIPLVAIGGINVHNAGLCKRAGADGIAVISAI
MASPRPTLAAQQLAAVMASSDISM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034291TMP_synthase
IPR013785Aldolase_TIM
IPR022998ThiamineP_synth_TenI
IPR036206ThiamineP_synth_sf