Gcaud2314.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2314.t1
Unique NameGcaud2314.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length194
Homology
BLAST of Gcaud2314.t1 vs. uniprot
Match: A0A2V3IX86_9FLOR (Membrane-associated progesterone receptor component 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX86_9FLOR)

HSP 1 Score: 216 bits (551), Expect = 1.320e-68
Identity = 110/191 (57.59%), Postives = 141/191 (73.82%), Query Frame = 0
Query:    1 MDSSTLDDQIEVDNKALNSQNIASLSLAITAVSILCLLIIRRLMRKSIPNDNQDMDVSDRQTTAERPVTESQLSKSNGEQGQPIFIAVKDPFSTKITVFDVTSAKDFYGPGGPYHVFAGKNATYGLARSSIDPDTVTGDLSNLTESQKDTHMQWHAKYSTKYPIVGYLVPDDSAANQETESTGTQDAETKK 191
            MD  T   + EV   A  S +  SL+LAI A+ +L  +I+R+L +    + + +M  S+  +  ERPVTE++LSK+ GE  QPI++ VKDPFS K+T+FDVTS+K FYGPGGPYHVFAGKNAT+GLA S+ D D VTGDLS+LTESQKDTHMQWHAKYS+KYP+VGYLV D +   +ETES  T + E+KK
Sbjct:    8 MDQHTASAKAEVVTSASGS-SYGSLALAIAAIGVLSFIILRQLAKHPKQSRHYNMATSETASAVERPVTETELSKAKGENDQPIYVGVKDPFSDKVTIFDVTSSKQFYGPGGPYHVFAGKNATHGLATSTTDADKVTGDLSDLTESQKDTHMQWHAKYSSKYPVVGYLVADGATTTEETESIVTDNTESKK 197          
BLAST of Gcaud2314.t1 vs. uniprot
Match: R7QKJ9_CHOCR (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKJ9_CHOCR)

HSP 1 Score: 147 bits (372), Expect = 4.710e-41
Identity = 72/139 (51.80%), Postives = 92/139 (66.19%), Query Frame = 0
Query:   28 AITAVSILCLLIIRRLMR---KSIPNDNQDMDVSDRQTTAERPVTESQLSKSNGEQGQPIFIAVKDPFSTKITVFDVTSAKDFYGPGGPYHVFAGKNATYGLARSSIDPDTVTGDLSNLTESQKDTHMQWHAKYSTKYP 163
            A   V IL   ++R +++   K       + ++     T    VTESQL  + GE  +P++IAVKDPF + +TVFDV+   DFYGPGGPYHVFAGKNAT+GLA+SS D   V GDL  LTES+KDTHMQW+ KY +KYP
Sbjct:   82 AAATVGILIAFVLRAILKSVTKPAAGSGSESEMQSSAATQSGVVTESQLKDATGEDDKPLYIAVKDPFGSSVTVFDVSGGSDFYGPGGPYHVFAGKNATHGLAKSSTDAAKVYGDLDKLTESEKDTHMQWYQKYESKYP 220          
BLAST of Gcaud2314.t1 vs. uniprot
Match: M2Y7S5_GALSU (Heme binding protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y7S5_GALSU)

HSP 1 Score: 124 bits (311), Expect = 1.510e-32
Identity = 57/104 (54.81%), Postives = 76/104 (73.08%), Query Frame = 0
Query:   69 TESQLSKSNGEQGQPIFIAVKDPFSTKITVFDVTSAKDFYGPGGPYHVFAGKNATYGLARSSIDPDTVTGDLSNLTESQKDTHMQWHAKYSTKYPIVGYLVPDD 172
            T  +L   +GE G+PI+IAV+ PF    TVFDV+  +DFYGPGGPYHVFAGKNA+ GLA++S DPD V G L +L+ESQKD+  QW+ ++  KY  +G+L  +D
Sbjct:   69 TLEELRAYDGENGKPIYIAVQGPFDQTPTVFDVSRGRDFYGPGGPYHVFAGKNASRGLAKTSTDPDDVEGPLDDLSESQKDSLSQWYLRFMEKYENIGHLKLED 172          
BLAST of Gcaud2314.t1 vs. uniprot
Match: A0A7S0ZAR0_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZAR0_9RHOD)

HSP 1 Score: 123 bits (308), Expect = 3.910e-32
Identity = 60/114 (52.63%), Postives = 82/114 (71.93%), Query Frame = 0
Query:   69 TESQLSKSNGEQGQPIFIAVKDPFST-KITVFDVTSAKDFYGPGGPYHVFAGKNATYGLARSSIDPDTVTGDLSNLTESQKDTHMQWHAKYSTKYPIVGYLVPDDSAANQETES 181
            T +QL   NG   QP++IAV++PF T +ITVFD+TS  DFYGPG PYHVFAG++A++GLA SS D + V GDL+ L+ S+ DT  QW+ K+ +KYP VG L  ++S ++  T S
Sbjct:   51 TSAQLLSFNGINNQPVYIAVQNPFDTSEITVFDMTSGIDFYGPGSPYHVFAGRHASHGLAMSSTDRNDVEGDLNKLSASELDTLTQWYLKFESKYPKVGLLRENESGSSAGTTS 164          
BLAST of Gcaud2314.t1 vs. uniprot
Match: A0A7S3A0K5_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A0K5_9RHOD)

HSP 1 Score: 118 bits (296), Expect = 1.500e-30
Identity = 57/138 (41.30%), Postives = 92/138 (66.67%), Query Frame = 0
Query:   32 VSILCLLIIRRLMRKSIPNDNQDMDVSDRQTTAERPVTESQLSKSNGEQGQPIFIAVKDPFSTKITVFDVTSAKDFYGPGGPYHVFAGKNATYGLARSSIDPDTVTGDLSNLTESQKDTHMQWHAKYSTKYPIVGYLV 169
            + I+ L++ + L+ K   N      +++     ++ +T ++L++ NG     I+IAV +    K ++FD+TSAKDFYGPGGPY +FAGKNA++GLA+SS+D   V GD+  L++++KDT   W+ KY++KYP VG L+
Sbjct:   21 LGIITLVLTKALLSKQQENPTAQAKMAEAAPLEKKDMTAAELAEYNGTARPEIYIAVTNIMDGKTSIFDMTSAKDFYGPGGPYGLFAGKNASHGLAKSSLDEKEVVGDVKALSDAEKDTLHGWYMKYASKYPQVGTLI 158          
BLAST of Gcaud2314.t1 vs. uniprot
Match: M1UTZ1_CYAM1 (Similar to steroid binding protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UTZ1_CYAM1)

HSP 1 Score: 118 bits (296), Expect = 1.630e-30
Identity = 60/141 (42.55%), Postives = 83/141 (58.87%), Query Frame = 0
Query:   42 RLMRKSIPNDNQDMDVSDRQTTAERPVTESQLSKSNGEQGQPIFIAVKDPFSTKITVFDVTSAKDFYGPGGPYHVFAGKNATYGLARSSIDPDTVTGDLSNLTESQKDTHMQWHAKYSTKYPIVGYLVPDDSAANQETEST 182
            RLM   + N          +  A R  T  +L++ NG +GQPI++AV+     +  VFDV+ A+ FYGPGGPY VFAGKNA+ GLA+ S +P  V G + +LTE +K+T  QW  K+  KY +VG+L  D S +   T  T
Sbjct:   21 RLMGNHVENPAVQPPPRHHERPAPRAFTGEELAQYNGTKGQPIYVAVQPRPGARAEVFDVSDARSFYGPGGPYFVFAGKNASRGLAKMSTEPGEVCGAIDDLTEHEKETLYQWFEKFLQKYEVVGHLREDPSGSGSSTNCT 161          
BLAST of Gcaud2314.t1 vs. uniprot
Match: A0A7S2ZZ35_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZZ35_9RHOD)

HSP 1 Score: 112 bits (280), Expect = 2.560e-28
Identity = 51/98 (52.04%), Postives = 73/98 (74.49%), Query Frame = 0
Query:   72 QLSKSNGEQGQPIFIAVKDPFSTKITVFDVTSAKDFYGPGGPYHVFAGKNATYGLARSSIDPDTVTGDLSNLTESQKDTHMQWHAKYSTKYPIVGYLV 169
            +L++ NG     I+IAV +    K ++FD+TSAKDFYGPGGPY +FAGKNA++GLA+SS+D   V GD+  L++++KDT   W+ KY++KYP VG L+
Sbjct:   47 ELAEYNGTARPEIYIAVTNIMDGKTSIFDMTSAKDFYGPGGPYGLFAGKNASHGLAKSSLDEKEVVGDVKALSDAEKDTLHGWYMKYASKYPQVGTLI 144          
BLAST of Gcaud2314.t1 vs. uniprot
Match: A0A7J7IJ05_9RHOD (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJ05_9RHOD)

HSP 1 Score: 111 bits (278), Expect = 8.220e-28
Identity = 54/113 (47.79%), Postives = 76/113 (67.26%), Query Frame = 0
Query:   69 TESQLSKSNGEQGQPIFIAVKDPFSTKITVFDVTSAKDFYGPGGPYHVFAGKNATYGLARSSIDPDTVTGDLSNLTESQKDTHMQWHAKYSTKYPIVGYLVPDDSAANQETES 181
            T  +L+K +G +G P+++AV+   + +  VFDVT A  FYGPGGPY+VFAGKNA+ GLA+ S DP  V+G L +L+E +K+T  QW  K+  KY +VG+L     A  Q T+S
Sbjct:   48 TAEELAKYDGTKGHPVYVAVQPRPNARAEVFDVTPAMSFYGPGGPYYVFAGKNASRGLAKMSTDPSEVSGPLEDLSEHEKETLHQWFEKFFQKYEVVGHL----GAMPQSTDS 156          
BLAST of Gcaud2314.t1 vs. uniprot
Match: A0A7S1TA86_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TA86_9RHOD)

HSP 1 Score: 106 bits (264), Expect = 1.890e-25
Identity = 49/121 (40.50%), Postives = 76/121 (62.81%), Query Frame = 0
Query:   68 VTESQLSKSNGEQGQPIFIAVKDPFSTKITVFDVTSAKDFYGPGGPYHVFAGKNATYGLARSSIDPDTVTGDLSNLTESQKDTHMQWHAKYSTKYPIVGYLV----PDDSAANQETESTGT 184
            +T  +L K  G    P+++  ++P + ++T+FD+ + +DFYGPGGPYHVFAG++A+ GLA+ S D   + GD S L+ S+ D  + W+ K+  KY  VGYLV     +DS   +E  S+ T
Sbjct:   54 MTPEELRKCTGVGHNPLYVGARNPHAEEVTIFDMETGRDFYGPGGPYHVFAGRDASMGLAKMSTDVQDLEGDFSTLSISEIDVLLSWYNKFQQKYIPVGYLVMHPAEEDSKVTKEAASSVT 174          
BLAST of Gcaud2314.t1 vs. uniprot
Match: UPI001CF4886A (membrane-associated progesterone receptor component 1 n=2 Tax=Bufo TaxID=8383 RepID=UPI001CF4886A)

HSP 1 Score: 94.0 bits (232), Expect = 9.160e-21
Identity = 56/160 (35.00%), Postives = 87/160 (54.37%), Query Frame = 0
Query:   35 LCLLIIRRLMRKSIPNDNQDMDVSDRQTTAERPVTESQLSKSNGEQGQPIFIAVKDPFSTKITVFDVTSAKDFYGPGGPYHVFAGKNATYGLARSSIDPDTVTG---DLSNLTESQKDTHMQWHAKYSTKYPIVGYLVPDDSAANQETESTGTQDAETKK 191
            LCL ++ +++R   P ++++           R  T +QL + +G Q   I +A+         VFDVT  K FYGP GPY VFAG++A+ GLA   +D + +T    DLS+LT SQKDT   W ++++ KY  VG L+ D     + T+    +D+  +K
Sbjct:   22 LCLYLLYKILRGDKPPESEESQEERLPKMKRRDFTVAQLKEYDGAQNPRILMAINGK------VFDVTRGKKFYGPEGPYGVFAGRDASRGLATFCLDKEALTDTFDDLSDLTASQKDTLSDWESQFTFKYHHVGKLLRDGEEPTEYTDEEDIKDSSDQK 175          
The following BLAST results are available for this feature:
BLAST of Gcaud2314.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IX86_9FLOR1.320e-6857.59Membrane-associated progesterone receptor componen... [more]
R7QKJ9_CHOCR4.710e-4151.80Cytochrome b5 heme-binding domain-containing prote... [more]
M2Y7S5_GALSU1.510e-3254.81Heme binding protein n=1 Tax=Galdieria sulphuraria... [more]
A0A7S0ZAR0_9RHOD3.910e-3252.63Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S3A0K5_9RHOD1.500e-3041.30Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
M1UTZ1_CYAM11.630e-3042.55Similar to steroid binding protein n=1 Tax=Cyanidi... [more]
A0A7S2ZZ35_9RHOD2.560e-2852.04Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7J7IJ05_9RHOD8.220e-2847.79Cytochrome b5 heme-binding domain-containing prote... [more]
A0A7S1TA86_9RHOD1.890e-2540.50Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
UPI001CF4886A9.160e-2135.00membrane-associated progesterone receptor componen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001199Cytochrome b5-like heme/steroid binding domainSMARTSM01117Cyt_b5_2coord: 68..169
e-value: 8.8E-8
score: 41.9
IPR001199Cytochrome b5-like heme/steroid binding domainPFAMPF00173Cyt-b5coord: 69..168
e-value: 1.5E-7
score: 31.5
IPR036400Cytochrome b5-like heme/steroid binding domain superfamilyGENE3D3.10.120.10coord: 60..170
e-value: 1.4E-30
score: 107.6
IPR036400Cytochrome b5-like heme/steroid binding domain superfamilySUPERFAMILY55856Cytochrome b5-like heme/steroid binding domaincoord: 65..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..72
NoneNo IPR availablePANTHERPTHR10281MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATEDcoord: 35..173
NoneNo IPR availablePANTHERPTHR10281:SF76CALCUTTA CUP-RELATEDcoord: 35..173
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..193
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 22..40
NoneNo IPR availableTMHMMTMhelixcoord: 22..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_845_length_17097_cov_4.330472contigNODE_845_length_17097_cov_4.330472:6641..7351 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2314.t1Gcaud2314.t1Gracilaria caudata M_176_S67 malemRNANODE_845_length_17097_cov_4.330472 6641..7351 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2314.t1 ID=Gcaud2314.t1|Name=Gcaud2314.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=194bp
MDSSTLDDQIEVDNKALNSQNIASLSLAITAVSILCLLIIRRLMRKSIPN
DNQDMDVSDRQTTAERPVTESQLSKSNGEQGQPIFIAVKDPFSTKITVFD
VTSAKDFYGPGGPYHVFAGKNATYGLARSSIDPDTVTGDLSNLTESQKDT
HMQWHAKYSTKYPIVGYLVPDDSAANQETESTGTQDAETKKNA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001199Cyt_B5-like_heme/steroid-bd
IPR036400Cyt_B5-like_heme/steroid_sf